FC931074

Overview
NameFC931074
Unique NameFC931074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_PROM9 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9312) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 62/109 (56.88%), Postives = 83/109 (76.15%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADV-GLDADHCKVLVNIEQQSPDIAQGVH 525
            M  F+FTSESV EGHPDK+CD++SDAVLDA L +DP+S+VACET   T + ++ GEIT+KA VDY K+VR+  + IG+      G DA+ C VLV +++QSPDI+QGV+
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVN 109          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_PROM3 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9303) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 63/109 (57.80%), Postives = 82/109 (75.23%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADV-GLDADHCKVLVNIEQQSPDIAQGVH 525
            M  ++FTSESV EGHPDK+CD+VSDAVLDA LAQDP S+VACET   T + ++ GE+T+ + VD+  +VR+  R IG++ A   G DA  C VLV ++QQSPDIAQGV+
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCLITGEVTSNSQVDFIHLVRNVIREIGYSGARAGGFDATSCAVLVALDQQSPDIAQGVN 109          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_PROM0 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9301) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 62/109 (56.88%), Postives = 83/109 (76.15%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADV-GLDADHCKVLVNIEQQSPDIAQGVH 525
            M  F+FTSESV EGHPDK+CD++SDAVLDA L +DP+S+VACET   T + ++ GEIT+KA VDY K+VR+  + IG+      G DA+ C VLV +++QSPDI+QGV+
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVN 109          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_NEIMF (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 63/108 (58.33%), Postives = 83/108 (76.85%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 525
            M  +LFTSESV+EGHPDK+ D+VSDA+LDA LAQDP ++VA ET   T + ++ GEITT A VDY K+ R+T + IG+ S+++G DA+ C V V  +QQSPDIAQGV+
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN 108          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_NEIMB (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup B GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 63/108 (58.33%), Postives = 83/108 (76.85%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 525
            M  +LFTSESV+EGHPDK+ D+VSDA+LDA LAQDP ++VA ET   T + ++ GEITT A VDY K+ R+T + IG+ S+++G DA+ C V V  +QQSPDIAQGV+
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN 108          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_NEIMA (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup A GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 63/108 (58.33%), Postives = 83/108 (76.85%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 525
            M  +LFTSESV+EGHPDK+ D+VSDA+LDA LAQDP ++VA ET   T + ++ GEITT A VDY K+ R+T + IG+ S+++G DA+ C V V  +QQSPDIAQGV+
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN 108          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_NEIM0 (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 63/108 (58.33%), Postives = 83/108 (76.85%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 525
            M  +LFTSESV+EGHPDK+ D+VSDA+LDA LAQDP ++VA ET   T + ++ GEITT A VDY K+ R+T + IG+ S+++G DA+ C V V  +QQSPDIAQGV+
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN 108          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_NEIG2 (S-adenosylmethionine synthetase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 63/108 (58.33%), Postives = 83/108 (76.85%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 525
            M  +LFTSESV+EGHPDK+ D+VSDA+LDA LAQDP ++VA ET   T + ++ GEITT A VDY K+ R+T + IG+ S+++G DA+ C V V  +QQSPDIAQGV+
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN 108          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_NEIG1 (S-adenosylmethionine synthetase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=metK PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 63/108 (58.33%), Postives = 83/108 (76.85%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 525
            M  +LFTSESV+EGHPDK+ D+VSDA+LDA LAQDP ++VA ET   T + ++ GEITT A VDY K+ R+T + IG+ S+++G DA+ C V V  +QQSPDIAQGV+
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN 108          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_LACAC (S-adenosylmethionine synthetase OS=Lactobacillus acidophilus GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 543
            ME  LFTSESV+EGHPDK+ D++SDA+LDA L +DP+S VACET   T MV VFGEI+T A VD + +VR T   IG+   ++G D ++C V+V+I++QSPDIA GV   L  R
Sbjct:    1 MEKRLFTSESVSEGHPDKVADQISDAILDAMLKKDPNSHVACETIVTTGMVFVFGEISTSAYVDIQDVVRKTILKIGYDRPELGFDGNNCAVMVDIDEQSPDIADGVDHSLETR 114          
The following BLAST results are available for this feature:
BLAST of FC931074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PROM92.339e-3056.88S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PROM32.339e-3057.80S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PROM02.339e-3056.88S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_NEIMF2.339e-3058.33S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_NEIMB2.339e-3058.33S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_NEIMA2.339e-3058.33S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_NEIM02.339e-3058.33S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_NEIG22.339e-3058.33S-adenosylmethionine synthetase OS=Neisseria gonor... [more]
METK_NEIG12.339e-3058.33S-adenosylmethionine synthetase OS=Neisseria gonor... [more]
METK_LACAC2.339e-3056.14S-adenosylmethionine synthetase OS=Lactobacillus a... [more]

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Properties
Property NameValue
Genbank descriptionC34101B05EF PostHarvP1 Citrus clementina cDNA clone C34101B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931074 ID=FC931074; Name=FC931074; organism=Citrus clementina; type=EST; length=560bp
GAAAAAAAACGAGAGAACTGCGAGTCGAGCTGCCGTTTTAGCGCCTCGCT
CGCTTCTCGCAGCGTATGCATATCGTGTTTCTCTCGGTCTTCTGGGTACT
GACCATTTTCGTATATCACCACCTTCAATTCCATTTGTACTCGCACCACG
GCCTCCTGCAAAGCGAAAGCTGCAGCTTCAGGTTAAATCAAATTAAAGAA
AATGGAAACATTTCTTTTCACATCAGAATCAGTGAACGAGGGTCACCCGG
ACAAGCTGTGTGACCGAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCT
CAGGATCCTGACAGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACAT
GGTCATGGTTTTTGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGA
AAATCGTGCGTGATACATGCAGATCGATTGGGTTCACATCGGCCGATGTG
GGGCTTGATGCTGATCACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAG
CCCTGACATTGCTCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGG
AGATTGGTGC
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