FC931074

Overview
NameFC931074
Unique NameFC931074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_DESPS (S-adenosylmethionine synthetase OS=Desulfotalea psychrophila GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 60/108 (55.56%), Postives = 82/108 (75.93%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 525
            M  +LFTSESV+EGHPDK+ D++SDA+LDA L QDP ++VACET   T M ++ GEITT A VD  ++VR+T + IG+ S+++G D   C V+  I++QSPDIAQGV+
Sbjct:   12 MSNYLFTSESVSEGHPDKVADQISDAILDAILEQDPQARVACETLVTTGMALIAGEITTSAWVDMPEVVRNTIKEIGYNSSEMGFDWQSCAVMTTIDKQSPDIAQGVN 119          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_PECCP (S-adenosylmethionine synthetase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=metK PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.054e-30
Identity = 66/107 (61.68%), Postives = 81/107 (75.70%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GEITT A VD E+I R T R IG+ ++++G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRRTVRDIGYVNSEMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_LACCB (S-adenosylmethionine synthetase OS=Lactobacillus casei (strain BL23) GN=metK PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.054e-30
Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = 1
Query:  205 ETFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 552
            E  LFTSESV+EGHPDK+ D++SDA+LDA L QDPDS+VACET   T +V+V GEI+TKA VD + +VR T + IG+T  + G D D   VLV +++QSPDIAQGV   L  R  +
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLEQDPDSRVACETTVTTGLVLVVGEISTKAYVDIQSVVRGTIKKIGYTK-ESGFDPDSVGVLVALDEQSPDIAQGVDESLEARESD 117          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_LACC3 (S-adenosylmethionine synthetase OS=Lactobacillus casei (strain ATCC 334) GN=metK PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.054e-30
Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = 1
Query:  205 ETFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 552
            E  LFTSESV+EGHPDK+ D++SDA+LDA L QDPDS+VACET   T +V+V GEI+TKA VD + +VR T + IG+T  + G D D   VLV +++QSPDIAQGV   L  R  +
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLEQDPDSRVACETTVTTGLVLVVGEISTKAYVDIQSVVRGTIKKIGYTK-ESGFDPDSVGVLVALDEQSPDIAQGVDESLEARESD 117          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_KOSOT (S-adenosylmethionine synthetase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=metK PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.054e-30
Identity = 65/111 (58.56%), Postives = 82/111 (73.87%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHL 534
            M+ +LFTSESV EGHPDK+ D+VSDA+LDA L QDP+S+VA ET   T + +V GE+TTKA VD  +IVRDT   IG+T A  G D + C VL +I++QSPDIA GV+  L
Sbjct:    1 MKKWLFTSESVTEGHPDKIADQVSDAILDAMLEQDPESRVAVETLVATGVAVVAGEVTTKAYVDIPRIVRDTILEIGYTRAKFGFDGETCAVLTSIDEQSPDIALGVNKSL 111          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_ERWCT (S-adenosylmethionine synthetase OS=Erwinia carotovora subsp. atroseptica GN=metK PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.054e-30
Identity = 66/107 (61.68%), Postives = 81/107 (75.70%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GEITT A VD E+I R T R IG+ ++++G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRRTVRDIGYVNSEMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_EDWI9 (S-adenosylmethionine synthetase OS=Edwardsiella ictaluri (strain 93-146) GN=metK PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.054e-30
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GEITT A VD E++ R T   IG+ S+D+G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTNAWVDIEELTRKTVADIGYVSSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_BORPD (S-adenosylmethionine synthetase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metK PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.054e-30
Identity = 62/104 (59.62%), Postives = 80/104 (76.92%), Query Frame = 1
Query:  211 FLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            FLFTSESV+EGHPDK+ D++SDA+LDA   QDP+++VA ET   T +V++ GEITT ANVDY ++ RDT R IG+ + D G+D   C VLV  ++QSPDIAQGV
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGV 109          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_PEDPA (S-adenosylmethionine synthetase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=metK PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.989e-30
Identity = 60/113 (53.10%), Postives = 82/113 (72.57%), Query Frame = 1
Query:  205 ETFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 543
            E  LFTSESV+EGHPDK+ D++SD++LD  L  DPD++VACET   T +V+V GEI+T A +D +K+VR T + IG+   + G D ++C V+V I++QSPDIAQGV   L  R
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDSILDELLKNDPDARVACETTVTTGLVVVVGEISTTAYIDIQKVVRKTIKDIGYVGGEYGFDGENCAVIVAIDEQSPDIAQGVDDSLETR 115          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_GEOSL (S-adenosylmethionine synthetase OS=Geobacter sulfurreducens GN=metK PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.989e-30
Identity = 61/107 (57.01%), Postives = 83/107 (77.57%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M+ ++FTSESV+EGHPDK+ D+VSDA+LDA L QD  ++VACET   T M ++ GEITT A VDY K+VR+T + IG+  + +G D + C VLV+I++QSPDI+QGV
Sbjct:    3 MKDYIFTSESVSEGHPDKVADQVSDAILDAILTQDKRARVACETLVTTGMAVIAGEITTTAVVDYPKVVRETIKEIGYNDSAMGFDWETCAVLVSIDKQSPDISQGV 109          
The following BLAST results are available for this feature:
BLAST of FC931074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DESPS2.339e-3055.56S-adenosylmethionine synthetase OS=Desulfotalea ps... [more]
METK_PECCP3.054e-3061.68S-adenosylmethionine synthetase OS=Pectobacterium ... [more]
METK_LACCB3.054e-3056.90S-adenosylmethionine synthetase OS=Lactobacillus c... [more]
METK_LACC33.054e-3056.90S-adenosylmethionine synthetase OS=Lactobacillus c... [more]
METK_KOSOT3.054e-3058.56S-adenosylmethionine synthetase OS=Kosmotoga olear... [more]
METK_ERWCT3.054e-3061.68S-adenosylmethionine synthetase OS=Erwinia carotov... [more]
METK_EDWI93.054e-3061.68S-adenosylmethionine synthetase OS=Edwardsiella ic... [more]
METK_BORPD3.054e-3059.62S-adenosylmethionine synthetase OS=Bordetella petr... [more]
METK_PEDPA3.989e-3053.10S-adenosylmethionine synthetase OS=Pediococcus pen... [more]
METK_GEOSL3.989e-3057.01S-adenosylmethionine synthetase OS=Geobacter sulfu... [more]

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Properties
Property NameValue
Genbank descriptionC34101B05EF PostHarvP1 Citrus clementina cDNA clone C34101B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931074 ID=FC931074; Name=FC931074; organism=Citrus clementina; type=EST; length=560bp
GAAAAAAAACGAGAGAACTGCGAGTCGAGCTGCCGTTTTAGCGCCTCGCT
CGCTTCTCGCAGCGTATGCATATCGTGTTTCTCTCGGTCTTCTGGGTACT
GACCATTTTCGTATATCACCACCTTCAATTCCATTTGTACTCGCACCACG
GCCTCCTGCAAAGCGAAAGCTGCAGCTTCAGGTTAAATCAAATTAAAGAA
AATGGAAACATTTCTTTTCACATCAGAATCAGTGAACGAGGGTCACCCGG
ACAAGCTGTGTGACCGAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCT
CAGGATCCTGACAGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACAT
GGTCATGGTTTTTGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGA
AAATCGTGCGTGATACATGCAGATCGATTGGGTTCACATCGGCCGATGTG
GGGCTTGATGCTGATCACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAG
CCCTGACATTGCTCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGG
AGATTGGTGC
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