FC931074

Overview
NameFC931074
Unique NameFC931074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_LEPBJ (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=metK PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.516e-29
Identity = 59/107 (55.14%), Postives = 79/107 (73.83%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            ++ F+FTSESV EGHPDK+CD++SDA+LDA L QDP S+VACET   TN+V++ GEIT+K  VD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGV 109          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_DESAD (S-adenosylmethionine synthetase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=metK PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.516e-29
Identity = 59/104 (56.73%), Postives = 79/104 (75.96%), Query Frame = 1
Query:  211 FLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            + FTSESV EGHPDK+ D++SD++LDA LAQD D++VACET   T M  + GEI+T    D+++IVRDT R IG+  +D+G DAD C V+ +I++QS DIAQGV
Sbjct:    8 YFFTSESVTEGHPDKVADQISDSILDAILAQDKDARVACETLVTTGMAFIAGEISTTGYADFQQIVRDTIREIGYVHSDMGFDADTCAVISSIDKQSVDIAQGV 111          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_THICR (S-adenosylmethionine synthetase OS=Thiomicrospira crunogena (strain XCL-2) GN=metK PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 62/107 (57.94%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M T +FTSESV+EGHPDK+ D++SDA+LDA + QDP ++VACET  KT MVM+ GEITT A VD E++VR     IG+   D+G D + C VL +I +QSP+IAQGV
Sbjct:    1 MTTTVFTSESVSEGHPDKIADQISDAMLDAIMKQDPKARVACETFVKTGMVMLGGEITTSAWVDQEELVRQVVNDIGYNHGDLGFDGETCAVLSSIGKQSPEIAQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 1
Query:  211 FLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQG------VHGHLTKRPEEIG 558
            +LFTSESV EGHPDK+ D++SDAVLDA LA DP ++VACET   T +V+V GEITT A VD   +VRD  R IG+T A  G D   C V+  I+ QSPDIAQG      V G + ++  EIG
Sbjct:    8 YLFTSESVTEGHPDKMADQISDAVLDAILALDPRARVACETLLTTGLVVVTGEITTHAYVDIPNLVRDVVRDIGYTRAKYGFDGSTCGVMTAIDPQSPDIAQGVDVAIEVRGEVNEKELEIG 129          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_SORC5 (S-adenosylmethionine synthetase OS=Sorangium cellulosum (strain So ce56) GN=metK PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 61/107 (57.01%), Postives = 79/107 (73.83%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M  + FTSESV EGHPDK+CD++SDA+LD  L +DP ++VACET  KT M +V GEITT A VD   +VR+T + IG+T A +G D + C VL  IE+QSPDI++GV
Sbjct:    1 MRRYQFTSESVTEGHPDKVCDQISDAILDGILEKDPTARVACETLVKTGMAVVAGEITTSAWVDMPVVVRNTIKDIGYTDAAMGFDYETCAVLTAIEKQSPDISRGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 60/104 (57.69%), Postives = 80/104 (76.92%), Query Frame = 1
Query:  211 FLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            + FTSESV+EGHPDK+ D++SD++LDA LAQDP ++VA ET   T +V++ GEITT ANVDY ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV
Sbjct:    5 YFFTSESVSEGHPDKVADQISDSILDAILAQDPTARVAAETLCNTGLVVLAGEITTNANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGV 108          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_DESAP (S-adenosylmethionine synthetase OS=Desulforudis audaxviator (strain MP104C) GN=metK PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 63/114 (55.26%), Postives = 80/114 (70.18%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 543
            M   LFTSESV EGHPDK+ D++SDA+LD+ L++DP ++VACET   T +V++ GEIT K  VD   IVR+T R IG+T A  G D D C VL +I++QSPDIA GV   L  R
Sbjct:    1 MAKHLFTSESVTEGHPDKVADQISDAILDSILSKDPLARVACETLVTTGLVLISGEITCKCYVDIPNIVRETVRDIGYTRAKYGFDCDTCAVLTSIDEQSPDIAMGVDEALEAR 114          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_CLOAB (S-adenosylmethionine synthetase OS=Clostridium acetobutylicum GN=metK PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 63/114 (55.26%), Postives = 79/114 (69.30%), Query Frame = 1
Query:  214 LFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEI 555
            LFTSESV EGHPDK+CD++SDA+LDA L +DP+ +VACET   T +V V GEI+T   VD  KIVR T R IG+T A  G D D C V+ +I++QS DIA GV   L  +  E+
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDAILEKDPNGRVACETTVTTGIVNVMGEISTNCYVDIPKIVRKTVREIGYTRAKYGFDCDTCAVVTSIDEQSADIAMGVDEALESKKGEM 117          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_BACHK (S-adenosylmethionine synthetase OS=Bacillus thuringiensis subsp. konkukian GN=metK PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = 1
Query:  214 LFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 543
            LFTSESV EGHPDK+CD++SD++LDA L++D +++VACET   T +V+V GEITT   VD  KIVR+T + IG+T A  G DA+ C VL +I++QS DIA GV   L  R
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAR 116          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_BACCZ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ZK / E33L) GN=metK PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = 1
Query:  214 LFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 543
            LFTSESV EGHPDK+CD++SD++LDA L++D +++VACET   T +V+V GEITT   VD  KIVR+T + IG+T A  G DA+ C VL +I++QS DIA GV   L  R
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAR 116          
The following BLAST results are available for this feature:
BLAST of FC931074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LEPBJ1.516e-2955.14S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_DESAD1.516e-2956.73S-adenosylmethionine synthetase OS=Desulfovibrio s... [more]
METK_THICR1.980e-2957.94S-adenosylmethionine synthetase OS=Thiomicrospira ... [more]
METK_SYMTH1.980e-2954.92S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_SORC51.980e-2957.01S-adenosylmethionine synthetase OS=Sorangium cellu... [more]
METK_POLNS1.980e-2957.69S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_DESAP1.980e-2955.26S-adenosylmethionine synthetase OS=Desulforudis au... [more]
METK_CLOAB1.980e-2955.26S-adenosylmethionine synthetase OS=Clostridium ace... [more]
METK_BACHK1.980e-2956.36S-adenosylmethionine synthetase OS=Bacillus thurin... [more]
METK_BACCZ1.980e-2956.36S-adenosylmethionine synthetase OS=Bacillus cereus... [more]

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Properties
Property NameValue
Genbank descriptionC34101B05EF PostHarvP1 Citrus clementina cDNA clone C34101B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931074 ID=FC931074; Name=FC931074; organism=Citrus clementina; type=EST; length=560bp
GAAAAAAAACGAGAGAACTGCGAGTCGAGCTGCCGTTTTAGCGCCTCGCT
CGCTTCTCGCAGCGTATGCATATCGTGTTTCTCTCGGTCTTCTGGGTACT
GACCATTTTCGTATATCACCACCTTCAATTCCATTTGTACTCGCACCACG
GCCTCCTGCAAAGCGAAAGCTGCAGCTTCAGGTTAAATCAAATTAAAGAA
AATGGAAACATTTCTTTTCACATCAGAATCAGTGAACGAGGGTCACCCGG
ACAAGCTGTGTGACCGAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCT
CAGGATCCTGACAGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACAT
GGTCATGGTTTTTGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGA
AAATCGTGCGTGATACATGCAGATCGATTGGGTTCACATCGGCCGATGTG
GGGCTTGATGCTGATCACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAG
CCCTGACATTGCTCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGG
AGATTGGTGC
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