FC931077

Overview
NameFC931077
Unique NameFC931077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15266 contig Ccv1_Contig15266:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP1A2_FELCA (Cytochrome P450 1A2 OS=Felis catus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16
Identity = 57/236 (24.15%), Postives = 103/236 (43.64%), Query Frame = 2
Query:    2 LMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            L + N +  + F + F    +    +L  ++     +  ++  N  DF PIL+      L+  K   ++ +Q  +    E  +     ++   +     + H         G I  + ++ ++ +I  A  +T   +I W +  LV +PE Q+K++ ELDTV+G   +    D  +LPYL+A I E  R    IP  VPH    D  L G+ +P +  + +N W + +    W  P
Sbjct:  190 LSVANVIGAMCFGQHFPQDSE---EKLSLIHSSNIFVENAYSGNPVDFFPILQYIPTPGLQRFKAFNQKLVQFLQKIIQEHYQDF--DENNIQDITGALLKHCKKGSRANGGRIPHEKIVSLINDIFGAGFDTVTTAISWSLMYLVTNPEKQRKIQEELDTVVGRARRPRLSDRLQLPYLEASILEIFRHSSFIPFTVPHSTTRDTTLNGFYIPEKHLVFINQWQVNHDQKVWGDP 420          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_BOVIN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bos taurus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16
Identity = 52/189 (27.51%), Postives = 98/189 (51.85%), Query Frame = 2
Query:  212 LQLFKDYFVEERKKLASTKS-MSNESL-KC-------AIDHILDAQTKGEINEDN----------------VLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            L++F    +E+ K    T++ + NE L KC       +I ++L    + ++N DN                +L  + +I  A +ETT   I+W +A L++HP ++K++++++D ++G     T  D ++L  L+A I+E LR+R   P L+PH  + D+ +G   +   + ++VN W L +    W+ P
Sbjct:  221 LKIFPSKAMEKMKGCVQTRNELLNEILEKCQENFSSDSITNLLHILIQAKVNADNNNAGPDQDSKLLSNRHMLATIGDIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDDIDQIIGFNRTPTISDRNRLVLLEATIREVLRIRPVAPTLIPHKAVIDSSIGDLTIDKGTDVVVNLWALHHSEKEWQHP 409          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16
Identity = 52/197 (26.40%), Postives = 94/197 (47.72%), Query Frame = 2
Query:  128 YNYGDFIPILRPF-LRGYLKICKEVKERRLQLFKDYFVEERKKL---ASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVE-NINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            +  GD +P L+   L G+ K  K+  ++   +  ++  E R+K    +  K +       A+  +L  +     + D ++      + +   +TT  ++ W +  L+ HP + +KL+ EL+T +G    + E D +KL YL A+IKETLRL    P   P     D  +GGY +   ++++ N W +   P+ W  P
Sbjct:  251 FTVGDGVPFLKWLDLGGHEKEMKKCAKKFDVMLNEWLEEHREKKGLGSEDKVVGERDFMDAMLLVLKDKPIEGFDVDTIIKATTLELILGGSDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDP 447          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP2J1_RABIT (Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CYP2J1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 69/233 (29.61%), Postives = 101/233 (43.35%), Query Frame = 2
Query:   14 NNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKK---LASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            N +  I F  RFE  D   F  L  L  E   L  S      +  P +  FL G  +       ++L+LF    +E  KK    A T+   +  LK    +          NE+N++    ++ +A  ETT   + WG+  +  +PEIQ+K+  E+D+V+G   Q +      LPY  AVI E  R+   +PL VP     D  L GY +P  + +L N   L   P  W  P
Sbjct:  190 NIICSITFGERFEYHDGQ-FQELLKLFDEVMYLEASMLCQLYNIFPWIMKFLPGAHQTLFS-NWKKLELFVSRMLENHKKDWNPAETRDFIDAYLKEMSKY--PGSATSSFNEENLICSTLDLFLAGTETTS-DMRWGLLFMALYPEIQEKVHAEIDSVIGQWQQPSMASRESLPYTNAVIHEVQRMGNILPLNVPREVTVDTTLAGYHLPKGTVVLTNLTALHKDPEEWATP 417          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP2E1_RAT (Cytochrome P450 2E1 OS=Rattus norvegicus GN=Cyp2e1 PE=1 SV=4)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 59/218 (27.06%), Postives = 100/218 (45.87%), Query Frame = 2
Query:   29 IMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAID--HILDAQTKGEINEDNVLYIVENINV-------AAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKIL 655
            I+F++RF+  D      +   N     L+  +   Y +F   LR     + KI K V E      K Y +E+ K+      + +  + CA D    L  + + E +    +Y +EN++V       A  ETT  ++ +G+  L+ +PEI++KL  E+D V+GP       D   +PY+ AV+ E  R    +P  +PH    D    GY +P  + ++
Sbjct:  183 ILFNKRFDYNDKKCLRLMSLFNENFYLLSTPWIQLYNNFADYLRYLPGSHRKIMKNVSE-----IKQYTLEKAKE-----HLQSLDINCARDVTDCLLIEMEKEKHSQEPMYTMENVSVTLADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRVPAVRDRLDMPYMDAVVHEIQRFINLVPSNLPHEATRDTVFQGYVIPKGTVVI 390          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP2D6_PANPA (Cytochrome P450 2D6 OS=Pan paniscus GN=CYP2D6 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 62/225 (27.56%), Postives = 107/225 (47.56%), Query Frame = 2
Query:   41 RRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR--PFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGE--INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            RRFE  DDP F RL  L  E  +    F     + +P+L   P L G  K+ +  K    QL  D  + E +          +  +  +  +  A+   E   N++N+  +V ++  A + TT  ++ WG+  ++ HP++Q++++ E+D V+G   +    D  ++PY  AVI E  R    +PL V HM   D ++ G+ +P  + +  N   +    A W+KP
Sbjct:  193 RRFE-YDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAG--KVLRFQKAFLTQL--DELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQARMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLFTNLSSVLKDEAVWEKP 412          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_PAPCY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio cynocephalus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 55/204 (26.96%), Postives = 97/204 (47.55%), Query Frame = 2
Query:  140 DFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDN----------------VLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            D  P L+ F    L+  K   + R  L    F   ++K  S           +I ++LD   + ++N DN                +L  + +I  A +ETT   ++W +A L+++P+++KKL  E+D  +G     T  D ++L  L+A I+E LR+R   P+L+PH    D+ +G + V   + +++N W L +    W +P
Sbjct:  216 DLFPWLKVFPNKTLEKLKRHVKTRNDLLTKIFENYKEKFRSD----------SITNMLDVLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQP 409          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP2D6_HUMAN (Cytochrome P450 2D6 OS=Homo sapiens GN=CYP2D6 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 62/225 (27.56%), Postives = 107/225 (47.56%), Query Frame = 2
Query:   41 RRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR--PFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGE--INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            RRFE  DDP F RL  L  E  +    F     + +P+L   P L G  K+ +  K    QL  D  + E +          +  +  +  +  A+   E   N++N+  +V ++  A + TT  ++ WG+  ++ HP++Q++++ E+D V+G   +    D   +PY  AVI E  R    +PL V HM   D ++ G+ +P  + ++ N   +    A W+KP
Sbjct:  193 RRFE-YDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAG--KVLRFQKAFLTQL--DELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKP 412          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP1A1_DICLA (Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 55/227 (24.23%), Postives = 107/227 (47.14%), Query Frame = 2
Query:   35 FDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR----PFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            F RR+   D  L + L  L+    ++  S   N  DFIP+L+      ++ ++ I     +   ++  +++    K   + + +++  +    D  LD     +++++ ++ IV ++  A  +T   ++ W +  LV +PEI+++L  EL   +G        D   LP+L+A I E  R    +P  +PH    D  L GY +P ++ + +N W + + P  WK P
Sbjct:  209 FGRRYGHNDQELLS-LVNLSDPFGQVVGSG--NPADFIPVLQFLPSTTMKNFMDINARFNKFVQKIVSEHYTTYDKD--NIRDITDSLIDHCEDRKLDENANVQMSDEKIVGIVNDLFGAGFDTISTALSWSVMYLVAYPEIEERLYQELKENVGLDRTPLLCDRPNLPFLEAFILEIFRHSSFLPFTIPHCTSKDTSLNGYFIPKDTCVFINQWQINHDPELWKDP 430          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_MACMU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca mulatta GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 55/204 (26.96%), Postives = 97/204 (47.55%), Query Frame = 2
Query:  140 DFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDN----------------VLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            D  P L+ F    L+  K   + R  L    F   ++K  S           +I ++LD   + ++N DN                +L  + +I  A +ETT   ++W +A L+++P+++KKL  E+D  +G     T  D ++L  L+A I+E LR+R   P+L+PH    D+ +G + V   + +++N W L +    W +P
Sbjct:  216 DLFPWLKVFPNKTLEKLKRHVKTRNDLLTKIFENYKEKFHSD----------SITNMLDVLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQP 409          
The following BLAST results are available for this feature:
BLAST of FC931077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
CP1A2_FELCA5.155e-1624.15Cytochrome P450 1A2 OS=Felis catus GN=CYP1A2 PE=2 ... [more]
CP17A_BOVIN5.155e-1627.51Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bos ta... [more]
C82A1_PEA5.155e-1626.40Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
CP2J1_RABIT6.733e-1629.61Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CY... [more]
CP2E1_RAT6.733e-1627.06Cytochrome P450 2E1 OS=Rattus norvegicus GN=Cyp2e1... [more]
CP2D6_PANPA6.733e-1627.56Cytochrome P450 2D6 OS=Pan paniscus GN=CYP2D6 PE=3... [more]
CP17A_PAPCY6.733e-1626.96Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio ... [more]
CP2D6_HUMAN8.793e-1627.56Cytochrome P450 2D6 OS=Homo sapiens GN=CYP2D6 PE=1... [more]
CP1A1_DICLA8.793e-1624.23Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp... [more]
CP17A_MACMU8.793e-1626.96Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34101B09EF PostHarvP1 Citrus clementina cDNA clone C34101B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931077 ID=FC931077; Name=FC931077; organism=Citrus clementina; type=EST; length=704bp
GCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCG
AGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAATGGTGAG
AGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTTTATTCC
CATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTA
AAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAG
AAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAAT
CGATCATATTTTGGACGCTCAGACAAAGGGAGAAATCAACGAGGACAACG
TTCTATACATCGTTGAGAACATCAATGTTGCCGCGATCGAGACAACTCTT
TGGTCGATCGAGTGGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCA
GAAGAAGCTCCGCAATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAA
TCACTGAGCCTGACACCCACAAACTACCCTACCTTCAGGCCGTGATCAAG
GAAACTCTTCGCCTTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAA
CCTTCACGACGCCAAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAA
TCCTAGTGAACGCGTGGTGGCTCGCCAACNATCCCGCCCCATGGAAGAAA
CCTG
back to top