FC931077

Overview
NameFC931077
Unique NameFC931077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15266 contig Ccv1_Contig15266:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_MACFA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca fascicularis GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 55/204 (26.96%), Postives = 97/204 (47.55%), Query Frame = 2
Query:  140 DFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDN----------------VLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            D  P L+ F    L+  K   + R  L    F   ++K  S           +I ++LD   + ++N DN                +L  + +I  A +ETT   ++W +A L+++P+++KKL  E+D  +G     T  D ++L  L+A I+E LR+R   P+L+PH    D+ +G + V   + +++N W L +    W +P
Sbjct:  216 DLFPWLKVFPNKTLEKLKRHVKTRNDLLTKIFENYKEKFHSD----------SITNMLDVLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQP 409          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_CAVPO (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia porcellus GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 53/207 (25.60%), Postives = 101/207 (48.79%), Query Frame = 2
Query:  131 NYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDN----------------VLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            N  D  P L+ F    L++ ++  E R  +      E ++K  S           ++ +++D   + ++NE+N                +L  + +I  A +ET+   + W IA L+++P+++KK++ E+D  +G     T  D + L  L+A I+E LR+R   P+L+PH    D+ +G + +  ++ +LVN W L +    W +P
Sbjct:  213 NLVDIFPWLKIFPNKTLEMIRKYTEIRGAMLSKILKECKEKFRSD----------SVSNLIDLLIQAKVNENNNNSSLDQDSNLFSDKHILTTLGDIFGAGVETSSSVVLWVIAFLLHNPQVKKKIQEEIDHNVGFSRTPTFSDRNHLLMLEATIREVLRIRPVAPILIPHKANTDSSIGEFAIDKDTNVLVNLWALHHNEQEWDRP 409          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 52/207 (25.12%), Postives = 103/207 (49.76%), Query Frame = 2
Query:  101 RSRLAQSFEYNYGDFIPILRPF---LRGYLKICKEVKERRLQLFKDYFVEERKKLASTK--SMSNESLKCAIDHILDAQTKGEINE----DNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPW 694
            R  +  +  +   D  P L+P     R   K+ + V +R  ++ +D   +  +K    K  + S    +  +D +L  +  G +      +N+  ++ NI  A  +T+  ++EW ++E++ +P++++K + EL  +      I E D  +L YL++VIKETLRL      L+P   +    + GY++P ++K+++N W +   P  W
Sbjct:  205 RKAITMTGGFEVDDMFPSLKPLHLLTRQKAKV-EHVHQRADKILEDILRKHMEKRTRVKEGNGSEAEQEDLVDVLLRLKESGSLEVPMTMENIKAVIWNIFAAGTDTSASTLEWAMSEMMKNPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPP-SQLIPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYW 409          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 67/244 (27.46%), Postives = 120/244 (49.18%), Query Frame = 2
Query:    2 LMMYNNMY-RIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFK--DYFVEE--RKKLASTKS-MSNESLKCAIDHILDAQTKGE----INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            L + NN+  RI   +R  S  D      + L   ++ L   F     DF P L     G+L     ++ R  ++F+  D F ++  ++ +A   S  S    +  +D +L  Q        I +D +  ++ +I VA  +T   +I W ++EL+ +P+  K+ + E+  ++     + E D  KL Y+++V+KE LRL    PLLVP     +  + G+++PA++++LVNA  +A  P  W+ P
Sbjct:  173 LSLTNNIVCRIALGKRNRSGADDANKVSEMLKETQAMLGGFFPV---DFFPRL-----GWLNKFSGLENRLEKIFREMDNFYDQVIKEHIADNSSERSGAEHEDVVDVLLRVQKDPNQAIAITDDQIKGVLVDIFVAGTDTASATIIWIMSELIRNPKAMKRAQEEVRDLVTGKEMVEEIDLSKLLYIKSVVKEVLRLHPPAPLLVPREITENCTIKGFEIPAKTRVLVNAKSIAMDPCCWENP 408          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_SHEEP (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ovis aries GN=CYP17A1 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 50/189 (26.46%), Postives = 96/189 (50.79%), Query Frame = 2
Query:  212 LQLFKDYFVEERKKLASTKS--MSNESLKC-------AIDHILDAQTKGEINEDN----------------VLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            L++F    +E+ K    T++  +S    KC       +I ++L    + ++N DN                +L  + +I  A +ETT   I+W +A L++HP ++K++++ +D  +G     T  D ++L  L+A I+E LR+R   P+L+PH  + D+ +G   +   + ++VN W L +    W++P
Sbjct:  221 LKIFPSKAMEKMKGCVETRNELLSEILEKCQENFTSDSITNLLHILMQAKVNADNNNTGPEQDSKLLSNRHMLATIADIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDSIDQNIGFNRTPTISDRNRLVLLEATIREVLRIRPVAPMLIPHKAIIDSSIGDLTIDKGTDVVVNLWALHHNEKEWQQP 409          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_BISBI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison bison GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 51/189 (26.98%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  212 LQLFKDYFVEERKKLASTKS-MSNESL-KC-------AIDHILDAQTKGEINEDN----------------VLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            L++F    +E+ K    T++ + NE L KC       +I ++L    + ++N DN                +L  + +I  A +ETT   I+W +A L++HP ++K++++++D ++G        D ++L  L+A I+E LR+R   P L+PH  + D+ +G   +   + ++VN W L +    W+ P
Sbjct:  221 LKIFPSKAMEKMKGYVQTRNELLNEILEKCQENFSSDSITNLLHILIQAKVNADNNNAGPDQDSKLLSSRHMLATIGDIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDDIDQIIGFNRTPAISDRNRLVLLEATIREVLRIRPVAPTLIPHKAVIDSSIGDLTIDKGTDVVVNLWALHHSEKEWQHP 409          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 49/176 (27.84%), Postives = 90/176 (51.14%), Query Frame = 2
Query:  176 YLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            + K    V  R  +L +   VE  +KL      S + L   ++   D   + +I  D +  +  ++  A  E +  +I+W +AE++ +P+I ++LR E+D+V+G    + E D   LPYLQA++KE LRL    P++       + K  G+ +P ++++ VN + +   P  W+ P
Sbjct:  245 FAKELMNVSNRFDELLEKILVEHEEKLQEHHQTS-DMLDMLLEAYGDENAEYKITRDQIKSLFVDLFSAGTEASANTIQWTMAEIIKNPKICERLREEIDSVVGKTRLVQETDLPNLPYLQAIVKEGLRLHPPGPVVRTFKETCEIK--GFYIPEKTRLFVNVYAIMRDPDFWEDP 417          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_CAPHI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra hircus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 52/189 (27.51%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  212 LQLFKDYFVEERKKLASTKS-MSNESL-KC-------AIDHILDAQTKGEINEDN----------------VLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            L++F    +E+ K    T++ + NE L KC       +I ++L    + ++N DN                +L  + +I  A +ETT   I+W +A L++HP ++K++++ +D  +G     T  D + L  L+A I+E LR+R   P+L+PH  + D+ +G   +   + ++VN W L +    W++P
Sbjct:  221 LKIFPSKAMEKMKGCVETRNELLNEILEKCQENFTSDSITNLLHILMQAKVNADNNNAGPDQDSKLLSNRHMLATIADIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDSIDQNIGFNRTPTISDRNCLVLLEATIREVLRIRPVAPMLIPHKAIIDSSIGDLTIDKGTDVVVNLWALHHNEKEWQQP 409          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C5081_DICDI (Probable cytochrome P450 508A1 OS=Dictyostelium discoideum GN=cyp508a1-1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 67/224 (29.91%), Postives = 107/224 (47.77%), Query Frame = 2
Query:   20 MYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSF-EYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHI----LDAQTK--GEINEDNVLYIVENIN---VAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVN 661
            M++ +F+      +D      + L G  S + Q+    +  D I I +P    YL++         Q FKD     R+K        NE LK     +    LD   K  G  N+D +L I+  IN   +A ++T+  ++E  +  L N+PEIQ+K  +E+ TV+    ++   D    PYL AVIKETLR +   P  +P  +  D  +GG+ +P  ++IL+N
Sbjct:  178 MFKFLFNHDIPEDEDINKGDTQKLMGPMSEVFQNAGRGSLFDVINITQPLYLLYLEMFD-------QSFKDIMKYHREKY-------NEHLKTFDPDVERDLLDILIKEYGTDNDDKILSILATINDFFLAGVDTSSTALESMVLMLTNYPEIQEKAFDEIKTVVNGRSKVNLSDRQSTPYLVAVIKETLRYKPMSPFGLPRSSSKDCMIGGHFIPKNAQILIN 387          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15
Identity = 48/148 (32.43%), Postives = 79/148 (53.38%), Query Frame = 2
Query:  275 SNESLKCAIDHILDAQTKG----EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHK----LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPW 694
            +N+  K  +D +L  + +     E+   ++ +I+ +I +    TT   +EW + EL+ HPE  KKL++E   + G    +T   +H+    + YL+AVIKE LRL    PLLV  +   D KL GYD+ A ++++ NAW +      W
Sbjct:  259 TNKPTKDFVDILLSFERQSKDGIEVRRSDIKFIILDIFLGGTTTTNSLLEWTMTELIRHPECMKKLQDE---IRGDATNLTIYRSHEEVEDMKYLKAVIKEGLRLHPPFPLLVLRLLTQDVKLKGYDIAAGTQVITNAWAIQRDIVTW 403          
The following BLAST results are available for this feature:
BLAST of FC931077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
CP17A_MACFA8.793e-1626.96Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_CAVPO8.793e-1625.60Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia ... [more]
C71D8_SOYBN1.148e-1525.12Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71A9_SOYBN1.148e-1527.46Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
CP17A_SHEEP1.959e-1526.46Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ovis a... [more]
CP17A_BISBI1.959e-1526.98Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison ... [more]
THAD_ARATH2.558e-1527.84Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
CP17A_CAPHI2.558e-1527.51Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra ... [more]
C5081_DICDI2.558e-1529.91Probable cytochrome P450 508A1 OS=Dictyostelium di... [more]
C71AF_ARATH3.341e-1532.43Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34101B09EF PostHarvP1 Citrus clementina cDNA clone C34101B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931077 ID=FC931077; Name=FC931077; organism=Citrus clementina; type=EST; length=704bp
GCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCG
AGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAATGGTGAG
AGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTTTATTCC
CATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTA
AAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAG
AAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAAT
CGATCATATTTTGGACGCTCAGACAAAGGGAGAAATCAACGAGGACAACG
TTCTATACATCGTTGAGAACATCAATGTTGCCGCGATCGAGACAACTCTT
TGGTCGATCGAGTGGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCA
GAAGAAGCTCCGCAATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAA
TCACTGAGCCTGACACCCACAAACTACCCTACCTTCAGGCCGTGATCAAG
GAAACTCTTCGCCTTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAA
CCTTCACGACGCCAAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAA
TCCTAGTGAACGCGTGGTGGCTCGCCAACNATCCCGCCCCATGGAAGAAA
CCTG
back to top