FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: ENPLL_HUMAN (Putative endoplasmin-like protein OS=Homo sapiens GN=HSP90B2P PE=5 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 81/221 (36.65%), Postives = 121/221 (54.75%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDN---SMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            F  N+ LG+ ED +N+T LA+LLR+ S+    ++TSL   V RMKE Q+ I  + G                  GYEV+Y+ + + EY +  L EF+GK+  +  KEG+K D+SE  K+  E ++++FE L   +KD  +                 C LV  +YGW+ NMERIMKAQA +     S   + S KKT EINP +P++ ++ +R   D++DK
Sbjct:  145 FGTNIKLGVIEDHSNRTCLAKLLRFQSSHHPADITSLHQDVERMKEKQDKICLMAG------------------GYEVIYLTEPVVEYCIQALPEFDGKRFQNVAKEGVKFDDSEKTKESHEAVEKEFEPLPNWVKDKAIKDKIEKAMVSQCLTESLCALVASQYGWSGNMERIMKAQAYQTGKGISTNYHASRKKTFEINPRHPLIRDMLRRIKEDEDDK 347          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PSEAE (Chaperone protein htpG OS=Pseudomonas aeruginosa GN=htpG PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.106e-32
Identity = 85/219 (38.81%), Postives = 121/219 (55.25%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + L  G  ED  NK K+A LLR+ ST   SG++  +L DY+ RMKEGQ+ IYY+TGES   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK+ V   +  L L   +SE++KK +E + +  EGL + +K VL                P  L  GE      M +I++A   +         SK   EINP++P++E+L    D D+
Sbjct:  383 NFGQVLKEGPAEDFGNKEKIAGLLRFASTGDDSGEQSVALADYIGRMKEGQDKIYYLTGESYSQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLPEFDGKQFVDVARGDLDLGSLDSEEDKKAQEEVAKSKEGLIERLKKVLDEQVSEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQK------VPDSKPIFEINPQHPLIEKLDAEPDEDR 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_NITMU (Chaperone protein htpG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=htpG PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.445e-32
Identity = 82/211 (38.86%), Postives = 120/211 (56.87%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE--KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            F + +  G+ ED  N+ ++A+LLR+ ST S  E    SL DYV RMK+GQ  IYY+T +S  A ++SP LE  +KK  EV+ + D +DE+ V  L EFEGK L S  K  L L + EDE + KE  KE  +++ L + IK+VLG               P CLVT  +  + N+ER++K+   +         +K  +EINP +P++E L+
Sbjct:  389 FGQVMKEGVAEDYANRERIAKLLRFVSTHSDSEEQDVSLSDYVGRMKDGQEKIYYVTADSLTAAKSSPHLEIFRKKDIEVILLFDRVDEWLVANLPEFEGKHLQSVAKGSLDLGKLEDEAEKKEQEKEAGEYKELTEKIKEVLGEQVKDVRITLRLTESPACLVTETHDMSGNLERLLKSAGQK------VTHTKPILEINPYHPMVERLK 593          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA7 (Chaperone protein htpG OS=Pseudomonas aeruginosa (strain PA7) GN=htpG PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.218e-32
Identity = 84/219 (38.36%), Postives = 120/219 (54.79%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + L  G  ED  NK K+A LLR+ ST   SG++  +L DY+ RMKEGQ+ IYY+TGES   V+NSP LE  +KKG EVL + D IDE+ +  L +F+GK  V   +  L L   +SE++KK +E + +  EGL + +K VL                P  L  GE      M +I++A   +         SK   EINP++P++E+L    D D+
Sbjct:  383 NFGQVLKEGPAEDFGNKEKIAGLLRFASTGGDSGEQSVALADYIGRMKEGQDKIYYLTGESYSQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLPDFDGKSFVDVARGDLDLGSLDSEEDKKAQEEVAKSKEGLIERLKKVLDEQASEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQK------VPESKPIFEINPQHPLIEKLDAEPDEDR 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_HAHCH (Chaperone protein htpG OS=Hahella chejuensis (strain KCTC 2396) GN=htpG PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.218e-32
Identity = 90/222 (40.54%), Postives = 121/222 (54.50%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA--QALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            F + L  G  ED  N+ K+A+L+R+ ST   D+    SL+DYV+RMK+GQ+ IYYIT ES  A   SP LE  +KKG EVL M D IDE+ +  L EF+GK      K  L L E ED  EK+ +E + ++ E L   +K+VL                P CLV G Y     M RIM+A  QAL +        SK T EINP++P++++L +   A   D
Sbjct:  390 FGRVLKEGPAEDFINREKIAKLMRFSSTHQDDDKQTQSLEDYVSRMKQGQDKIYYITAESYSAGVKSPHLEIFRKKGIEVLVMHDRIDEWLMSHLNEFDGKHFQDIAKGELDLGEVEDKEEKEKQEEVSKEAEPLLNRLKEVLKDHVEEVRVTHRLTDSPACLVVGAYDMGVQMRRIMEAAGQALPE--------SKPTFEINPDHPLVKKLGEEQGARFED 603          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_DECAR (Chaperone protein htpG OS=Dechloromonas aromatica (strain RCB) GN=htpG PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.218e-32
Identity = 81/212 (38.21%), Postives = 119/212 (56.13%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLK--EKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F   L  G+ ED  NK K+A L+R+ ST +   ++  SL DY+ RMKEGQ  IY++T ++  A +NSP LE  +KKG EVL + D +DE+ VG L EF+GK L S  K GL L + EDE + +E  K  + ++ L + +K  LG               P CLV+ E+  + N+ R+MKA            +SK  +EINP++P +  L+
Sbjct:  386 AFGSVLKEGVGEDHANKEKIAGLIRFSSTHNDTAEQNVSLADYIGRMKEGQEKIYFVTADTFNAAKNSPHLEIFRKKGIEVLLLSDRVDEWVVGHLTEFDGKHLQSVAKGGLDLGKLEDEAEKQEAEKAADDYKELLEKVKTSLGDKVKDVRVTYRLTDSPSCLVSDEHDPSGNLARLMKAAG------QPMPNSKPILEINPQHPAVMRLK 591          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_HALHL (Chaperone protein htpG OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.490e-32
Identity = 78/213 (36.62%), Postives = 118/213 (55.40%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYM--SSKKTMEINPENPIMEEL 622
            +F +    GI ED  N+ ++A LLR+ ST    E    SL DYV RMK+GQ  IYY+T ES  A  NSP LE  ++ G EVL + D +DE+ V  L E++GK+L S  K  L L+    ED+K+ ++  ++ +E LCK + + LG               P CLV GEY +   M+R+++A        AG+   + +  +E+NP++ ++E L
Sbjct:  386 AFGRVFKEGIAEDPGNRERIARLLRFSSTHEEKETPDVSLDDYVARMKDGQEKIYYVTAESFNAARNSPHLEIFRRHGIEVLLLPDPVDEWLVAHLHEYDGKQLASVAKGELDLEALGEEDDKQARQEKEQAYEDLCKRLGETLGERVSEVRVSHRLTDSPACLVVGEYDFGMGMQRLLQA--------AGHQLPAGQPALEVNPDHSVIERL 590          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPK (Chaperone protein htpG OS=Pseudomonas putida (strain KT2440) GN=htpG PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.364e-32
Identity = 85/220 (38.64%), Postives = 117/220 (53.18%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGL---KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + L  G  ED  NK K+A LLR+ ST+  SG++  +L DY+ R KEGQ+ IYY+TGES   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK  V   +  L   KLD  ED+K  +E  K+K EGL + +K  LG               P  L  GE      M +I++A   +         SK   E NP +P++E+L      D+
Sbjct:  383 NFGQVLKEGPAEDFANKEKIAGLLRFASTQDDSGEQSVALADYLARAKEGQDKIYYLTGESYAQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLNEFDGKAFVDIARGDLDLGKLDSEEDKKAQEEVAKDK-EGLVERLKGALGDSVAEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQK------VPESKPIFEFNPSHPLIEKLDHEQSEDR 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PSEMY (Chaperone protein htpG OS=Pseudomonas mendocina (strain ymp) GN=htpG PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.223e-31
Identity = 87/220 (39.55%), Postives = 118/220 (53.64%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKS-GDELT-SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGL---KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + L  G  ED  NK K+A LLR+ ST   GDE + SL DY+ R+K+GQ+ IYY+TGES   ++NSP LE  +KKG EVL + D IDE+ +  L EF+GK+ V   +  L   KLD  ED+K  +E  K K EGL + +K  LG               P  L  GE      M +I++A   +         SK   E NP +P++E L   AD D+
Sbjct:  383 AFGQVLKEGPAEDFANKEKIAGLLRFASTAGEGDEQSVSLADYLGRVKDGQDKIYYLTGESYAQIKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDGKQFVDVARGDLDLGKLDSEEDKKAQEEVAKAK-EGLIERLKGALGEQVKEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQK------VPESKPIFEFNPSHPLIERLDAEADEDR 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BORPE (Chaperone protein htpG OS=Bordetella pertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.558e-31
Identity = 78/220 (35.45%), Postives = 121/220 (55.00%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            F + L  G  ED+ N+ ++A LLR+ ST  G++    S  DYV RMK+GQ+ IYY+T ++  A  NSP LE  +KKG EVL + D +DE+ +  L+EF+GK LVS  K GL L E   E+EKK +  + E F+ L + ++  L                P C+V G+   + ++ R++KA       +      K  +EINP++ ++  +R  +DA+  D
Sbjct:  388 FGQVLKEGTGEDAANRERIARLLRFASTHDGEQAQTVSFADYVGRMKDGQDKIYYVTADTFTAAANSPHLEIFRKKGIEVLLLSDRVDEWMLSYLREFDGKSLVSVAKGGLDLAELADEEEKKRQSEVAETFKPLVERLQQALAEQVKEVRVTQRLVDSPACVVVGQNELSPHLLRMLKAAGQEAPEV------KPVLEINPDHALVARIRDASDAEFGD 601          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
ENPLL_HUMAN8.469e-3336.65Putative endoplasmin-like protein OS=Homo sapiens ... [more]
HTPG_PSEAE1.106e-3238.81Chaperone protein htpG OS=Pseudomonas aeruginosa G... [more]
HTPG_NITMU1.445e-3238.86Chaperone protein htpG OS=Nitrosospira multiformis... [more]
HTPG_PSEA73.218e-3238.36Chaperone protein htpG OS=Pseudomonas aeruginosa (... [more]
HTPG_HAHCH3.218e-3240.54Chaperone protein htpG OS=Hahella chejuensis (stra... [more]
HTPG_DECAR3.218e-3238.21Chaperone protein htpG OS=Dechloromonas aromatica ... [more]
HTPG_HALHL5.490e-3236.62Chaperone protein htpG OS=Halorhodospira halophila... [more]
HTPG_PSEPK9.364e-3238.64Chaperone protein htpG OS=Pseudomonas putida (stra... [more]
HTPG_PSEMY1.223e-3139.55Chaperone protein htpG OS=Pseudomonas mendocina (s... [more]
HTPG_BORPE3.558e-3135.45Chaperone protein htpG OS=Bordetella pertussis GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
back to top