FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.558e-31
Identity = 78/220 (35.45%), Postives = 121/220 (55.00%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            F + L  G  ED+ N+ ++A LLR+ ST  G++    S  DYV RMK+GQ+ IYY+T ++  A  NSP LE  +KKG EVL + D +DE+ +  L+EF+GK LVS  K GL L E   E+EKK +  + E F+ L + ++  L                P C+V G+   + ++ R++KA       +      K  +EINP++ ++  +R  +DA+  D
Sbjct:  388 FGQVLKEGTGEDAANRERIARLLRFASTHDGEQAQTVSFADYVGRMKDGQDKIYYVTADTFTAAANSPHLEIFRKKGIEVLLLSDRVDEWMLSYLREFDGKSLVSVAKGGLDLAELADEEEKKRQSEVAETFKPLVERLQQALAEQVKEVRVTQRLVDSPACVVVGQNELSPHLLRMLKAAGQEAPEV------KPVLEINPDHALIARIRDASDAEFGD 601          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF5 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=htpG PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.558e-31
Identity = 84/215 (39.07%), Postives = 120/215 (55.81%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED +N+ ++A LLR+ ST +  +    SL DY+ RM EGQ+ IYYIT +S  A +NSP LE L+KKG EVL + D +DE+    L EFEGK L S  K  L L   E+E+E+K +E  ++  EGL + IK+ LG               P C+V GE      M++++K QA  + S     S+K  +EINP +P++  +    D
Sbjct:  379 FGRVLKEGPGEDYSNREQIARLLRFASTHTDTDTQNVSLADYLARMAEGQDKIYYITADSFLAAKNSPQLELLRKKGIEVLLLSDRVDEWLTSHLPEFEGKALTSVAKGALDLGAIETEEERKSQEETEKDAEGLVERIKNALGERVETVRVSHRLTSSPACIVLGERDMALYMQQLLK-QAGHEIS-----STKPVLEINPTHPMLARIEGEKD 587          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF2 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=htpG PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.558e-31
Identity = 84/215 (39.07%), Postives = 120/215 (55.81%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED +N+ ++A LLR+ ST +  +    SL DY+ RM EGQ+ IYYIT +S  A +NSP LE L+KKG EVL + D +DE+    L EFEGK L S  K  L L   E+E+E+K +E  ++  EGL + IK+ LG               P C+V GE      M++++K QA  + S     S+K  +EINP +P++  +    D
Sbjct:  379 FGRVLKEGPGEDYSNREQIARLLRFASTHTDTDTQNVSLADYLARMAEGQDKIYYITADSFLAAKNSPQLELLRKKGIEVLLLSDRVDEWLTSHLPEFEGKALTSVAKGALDLGAIETEEERKSQEETEKDAEGLVERIKNALGERVETVRVSHRLTSSPACIVLGERDMALYMQQLLK-QAGHEIS-----STKPVLEINPTHPMLARIEGEKD 587          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_NITOC (Chaperone protein htpG OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=htpG PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.647e-31
Identity = 78/211 (36.97%), Postives = 121/211 (57.35%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            F + +  G+ EDS N+ ++A LLR+ ST   + ++  SL DY++RMKEGQ+ IYYIT +S  A ++SP LE  +KKG EVL + D +DE+ V  L EFEGK L S TK  L L   E E EK+ ++ ++E F+ L + +K+ LG               P CLV  ++  +  +ER++K    +   +      +  +E+NP +PI+  L+
Sbjct:  384 FGQVMKEGVGEDSGNREQIARLLRFASTHHDTAEQTVSLADYLSRMKEGQDKIYYITADSFPAAKSSPHLEVFRKKGIEVLLLSDRVDEWLVASLPEFEGKSLQSVTKGELDLGHLEDEQEKQQQKEVEEDFQNLVERVKNNLGDKVKEVRVTHRLTDSPVCLVVEQHDMSGYLERLLKEAGQQAPHI------QPILELNPAHPIIARLK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFT (Chaperone protein htpG OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=htpG PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.035e-30
Identity = 80/219 (36.53%), Postives = 117/219 (53.42%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + L  G  ED +N+ K+A LLR+ ST   SGD   +L DY+ RMKEGQ+ +YY+TGES   +++SP+LE  +KKG EVL +VD IDE+ +  L EF+GK  V   +  L L   +SE +KK +E + +  E L   IK  LG               P  L  GE      M ++++A   +         +K   E NP +P++E+L    D D+
Sbjct:  385 NFGQVLKEGPAEDYSNREKVASLLRFASTYDTSGDPSVALTDYIARMKEGQDKLYYLTGESYAQIKDSPYLEVFRKKGIEVLLLVDRIDEWLMNYLHEFDGKSFVDIARGDLDLGNLDSEADKKAQEEIAKTKEALASRIKATLGEDVAEVRVSHRLTDSPAVLAIGEGDLGLQMRQLLEASGQK------VPETKPVFEFNPSHPLIEKLDAEQDMDR 597          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFA (Chaperone protein htpG OS=Xylella fastidiosa GN=htpG PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.035e-30
Identity = 80/219 (36.53%), Postives = 117/219 (53.42%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + L  G  ED +N+ K+A LLR+ ST   SGD   +L DY+ RMKEGQ+ +YY+TGES   +++SP+LE  +KKG EVL +VD IDE+ +  L EF+GK  V   +  L L   +SE +KK +E + +  E L   IK  LG               P  L  GE      M ++++A   +         +K   E NP +P++E+L    D D+
Sbjct:  386 NFGQVLKEGPAEDYSNREKVASLLRFASTYDTSGDPSVALADYIARMKEGQDKLYYLTGESYAQIKDSPYLEVFRKKGIEVLLLVDRIDEWLMNYLHEFDGKSFVDIARGDLDLGNLDSEADKKAQEEIAKTKEALASRIKATLGEDVAEVRVSHRLTDSPAVLAIGEGDLGLQMRQLLEASGQK------VPETKPVFEFNPSHPLIEKLDAEQDMDR 598          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHESR (Chaperone protein htpG OS=Shewanella sp. (strain MR-7) GN=htpG PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.035e-30
Identity = 85/215 (39.53%), Postives = 117/215 (54.42%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQN IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T+  L+L E ED  EK+ +E L E+   L + IK  LG               P C+VTGE   ++ M ++M+A              K T EINP +P++  L    D
Sbjct:  387 FGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYLSRMKEGQNKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLVERIKAALGASVADVKVTSRLTDTPACVVTGEGEMSSQMIKLMQAAG------QPVPEVKPTFEINPAHPLVSRLNDLQD 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_NITEU (Chaperone protein htpG OS=Nitrosomonas europaea GN=htpG PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.035e-30
Identity = 80/211 (37.91%), Postives = 117/211 (55.45%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE--KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            F + L  GI ED +N+ ++A+LLR+ ST  +  ++  SL DY+ RMK  Q  IYYIT +  KA ++SP LE  +KKG EVL + D IDE+ V  L E+ GK L S  K  L L + EDE++ KE  KE   F+ L   +K+VLG               P CLV   +  + N+ R++K+   +         SK  +EINP +P+++ L+
Sbjct:  389 FGQVLKEGIAEDYSNRERIAKLLRFTSTHDEREEQTVSLDDYIARMKPEQEKIYYITADGLKAAQSSPHLEIFRKKGIEVLLLCDRIDEWLVANLNEYTGKSLQSIAKGNLDLGKLEDEEEKKEHEKEAGDFQELTNKMKEVLGEQVKDVRITYRLTESPACLVADTHDVSGNLGRLLKSAGQK------VPDSKPFLEINPHHPMIQRLK 593          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHESA (Chaperone protein htpG OS=Shewanella sp. (strain ANA-3) GN=htpG PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.352e-30
Identity = 84/215 (39.07%), Postives = 117/215 (54.42%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQN IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T+  L+L E ED  EK+ +E L E+   L + IK  LG               P C+VTGE   ++ M ++M+A              K T E+NP +P++  L    D
Sbjct:  387 FGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYLSRMKEGQNKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGASVADVKVTSRLTDTPACVVTGEGEMSSQMIKLMQAAG------QPVPEVKPTFEVNPAHPLVSRLNDLQD 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPL (Chaperone protein htpG OS=Legionella pneumophila (strain Lens) GN=htpG PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.766e-30
Identity = 84/213 (39.44%), Postives = 116/213 (54.46%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   L  G  ED  NK  +A+LLR+ +T SG E    SL++YV+RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +K  ++L + E  +++KE  ++  E L K IK VL                P C+V  E      M+RI++A   +         SK   EINPE+ +++ L    D
Sbjct:  378 FGLVLKEGPIEDFANKEAIAKLLRFSTTASGSEKQEVSLEEYVSRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFTGKKLQSISKGKVELGDDETSEQIKEQ-EKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQAAGQQ------IPVSKPIFEINPEHALIKRLHDIQD 583          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_BORBR3.558e-3135.45Chaperone protein htpG OS=Bordetella bronchiseptic... [more]
HTPG_ACIF53.558e-3139.07Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_ACIF23.558e-3139.07Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_NITOC4.647e-3136.97Chaperone protein htpG OS=Nitrosococcus oceani (st... [more]
HTPG_XYLFT1.035e-3036.53Chaperone protein htpG OS=Xylella fastidiosa (stra... [more]
HTPG_XYLFA1.035e-3036.53Chaperone protein htpG OS=Xylella fastidiosa GN=ht... [more]
HTPG_SHESR1.035e-3039.53Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_NITEU1.035e-3037.91Chaperone protein htpG OS=Nitrosomonas europaea GN... [more]
HTPG_SHESA1.352e-3039.07Chaperone protein htpG OS=Shewanella sp. (strain A... [more]
HTPG_LEGPL1.766e-3039.44Chaperone protein htpG OS=Legionella pneumophila (... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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