FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PSEFS (Chaperone protein htpG OS=Pseudomonas fluorescens (strain SBW25) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.711e-30
Identity = 80/211 (37.91%), Postives = 114/211 (54.03%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F + +  G  ED  NK K+A LLR+ ST+   G+++ SL +Y+ R KEGQ+ IYY+TGE+   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK  V   +  L L   +SE+EKK  E + +  EGL + IK  LG               P  L  GE      M +I++A   +         SK   E NP +P++E+L
Sbjct:  385 NFGQVMKEGPAEDFANKEKIAGLLRFASTQGDDGEQVVSLAEYLARAKEGQDKIYYLTGETYAQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLNEFDGKSFVDVARGDLDLGNLDSEEEKKEAEEVAKSKEGLVERIKASLGDAVSEVRVSHRLTDSPAILAIGEQDLGMQMRQILEASGQK------VPDSKPIFEFNPAHPLIEKL 589          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHEFN (Chaperone protein htpG OS=Shewanella frigidimarina (strain NCIMB 400) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30
Identity = 82/215 (38.14%), Postives = 114/215 (53.02%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELT--SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED  NK ++A LLR+ ST      T  SL+ Y+ RMK GQ+ IYYI  +S +A  NSP LE L+KKG EVL + + IDE+ V  L EF+ KKL S T+  L+L E ED  +K+  + + E+ +GL + +K  L                P C+V GE   +  M ++M+A             SK T EINP +P++E L    D
Sbjct:  387 FGQVLKEGPAEDFANKERIAGLLRFASTHDNSAATTVSLEAYIERMKAGQDKIYYIVADSHEAAANSPHLELLRKKGIEVLLLSERIDEWLVNHLTEFKDKKLHSVTRGDLELGELEDAADKEAHDKVAEESKGLIERVKAALADSVSEVRVTSRLTDTPACVVAGEGEMSTQMIKLMQAAG------QPVPESKPTFEINPTHPLVEHLNNETD 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PSESM (Chaperone protein htpG OS=Pseudomonas syringae pv. tomato GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30
Identity = 82/222 (36.94%), Postives = 119/222 (53.60%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            +F + L  G  ED  NK K+A LLR+ ST   SG++  SL DY+ R KEGQ+ IYY+TGES   V NSP LE  +KKG EVL + D IDE+ +  L +F+GK  V   +  L L   +SE++KK +E + +  EGL + +K  LG               P  L  GE      M +I++A   +         SK   E NP +P++ +L    DA+++++
Sbjct:  384 NFGQVLKEGPAEDFANKEKIAGLLRFASTSDDSGEQSVSLADYLARGKEGQDKIYYLTGESYAQVRNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLSDFDGKNFVDVARGDLDLGNLDSEEDKKAQEEIAKDKEGLIERLKAALGESVSEVRVSHRLTDSPAILAIGEQDMGLQMRQILEASGQK------VPDSKPIFEFNPAHPLIGKL----DAEQSEE 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PSEF5 (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30
Identity = 80/211 (37.91%), Postives = 113/211 (53.55%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F + +  G  ED  NK K+A LLR+ ST+   G++  SL DY+ R KEGQ+ IY++TGES   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK  V   +  L L   +SE++KK  E + +  EGL + IK  LG               P  L  GE      M +I++A   +         SK   E NP +P++E+L
Sbjct:  383 NFGQVMKEGPAEDFANKEKIAGLLRFASTQGDDGEQNVSLADYLARAKEGQDKIYFLTGESYAQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLNEFDGKSFVDVARGDLDLGNLDSEEDKKAAEEVAKTKEGLVERIKTALGESVSEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQK------VPDSKPIFEFNPTHPLIEKL 587          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30
Identity = 80/220 (36.36%), Postives = 115/220 (52.27%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKET----LKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            F K L  G+  DS N+  L  +  + ST S +E T+L  YV RMK+GQ+ I+Y TGES++ V NSP LE  K KGYEVL + D +DE  VG   EF+GK L S  +  + L ESE+EK   E      ++ F GL   +K+ L                P CL+T  +G T  + RI +A      S       K+ +E+NP +P++  L++  +   +D
Sbjct:  401 FGKVLKEGLMSDSDNRDTLLHISSFASTHSDEEPTTLAQYVERMKDGQDQIFYATGESRQQVMNSPHLEAFKAKGYEVLLLTDPVDEVWVGMAPEFDGKPLKSVARGEVDL-ESEEEKTAHEAERKEQEQNFAGLVNWLKETLSDHVKEVRLSTRLTESPACLITDAFGITPALARIYRA------SGQDVPFGKRILELNPNHPLITGLQQAHENGGDD 613          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPC (Chaperone protein htpG OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29
Identity = 83/215 (38.60%), Postives = 114/215 (53.02%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQ  IYYI  +S  A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T+  L+L E ED  EK+ +E L E+   L + IK  LG               P C+VTGE   +  M ++M+A              K T E+NP +P++  L    D
Sbjct:  387 FGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSYDAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGTKVADVKVTSRLTDTPACVVTGEGEMSTQMIKLMQAAG------QPVPEVKPTFEVNPAHPLVSRLNDLQD 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB9 (Chaperone protein htpG OS=Shewanella baltica (strain OS195) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29
Identity = 82/215 (38.14%), Postives = 115/215 (53.49%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQ  IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T+  L+L E ED  EK+ +E L+++   L + IK  LG               P C+V GE   +  M ++M+A              K T EINP +P++  L    D
Sbjct:  387 FGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGDLELGELEDASEKEAQEKLEQESVALVERIKAALGSTVADVKVTSRLTDTPACVVAGEGEMSTQMIKLMQAAG------QPVPEVKPTFEINPAHPLVSRLNDLQD 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB8 (Chaperone protein htpG OS=Shewanella baltica (strain OS185) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29
Identity = 82/215 (38.14%), Postives = 115/215 (53.49%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQ  IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T+  L+L E ED  EK+ +E L+++   L + IK  LG               P C+V GE   +  M ++M+A              K T EINP +P++  L    D
Sbjct:  387 FGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGDLELGELEDASEKEAQEKLEQESVALVERIKAALGSTVADVKVTSRLTDTPACVVAGEGEMSTQMIKLMQAAG------QPVPEVKPTFEINPAHPLVSRLNDLQD 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_RHOFD (Chaperone protein htpG OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=htpG PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.495e-29
Identity = 79/210 (37.62%), Postives = 112/210 (53.33%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK--AQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F   L  G+ ED  NK +LA+LLR+ S+ +     S  DY  RMKEGQ  IYYIT ++  A +NSP LE  KKKG EVL M D +DE+A+  L+EF+G  L S  K  + L + +D  EKK  E   E F+ L   +K+ L                P CLV  ++G +  + R++K   QA  D         K  +E+N E+P++++L
Sbjct:  422 FGAVLKEGLGEDYANKDRLAKLLRFASSSTDTVSVSFADYKARMKEGQEAIYYITADTPAAAKNSPQLEVFKKKGIEVLLMTDRVDEWALNYLQEFDGTPLQSVAKGAVDLGKLQDEAEKKAAEEAAETFKPLLAKLKEALKDKAEDVRVTTRLVDSPACLVVQDHGMSTQLARMLKQAGQAAPD--------VKPVLEVNAEHPLVKKL 623          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PSEU2 (Chaperone protein htpG OS=Pseudomonas syringae pv. syringae (strain B728a) GN=htpG PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.495e-29
Identity = 80/219 (36.53%), Postives = 115/219 (52.51%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + L  G  ED  NK K+A LLR+ ST   SG++  SL +Y+ R KEGQ+ IYY+TGES   V+NSP LE  +KKG EVL + D IDE+ +  L +F+GK  V   +  L L   +SE++KK +E + +  EGL + +K  LG               P  L  GE      M +I++A   +         SK   E NP +P++ +L      D+
Sbjct:  384 NFGQVLKEGPAEDFANKEKIAGLLRFASTSDDSGEQSVSLAEYLARAKEGQDKIYYLTGESYAQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLSDFDGKGFVDVARGDLDLGNLDSEEDKKAQEEIAKDKEGLIERLKAALGESVSEVRVSHRLTDSPAILAIGEQDMGLQMRQILEASGQK------VPDSKPIFEFNPAHPLIGKLDAEQSEDR 596          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_PSEFS6.711e-3037.91Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_SHEFN8.764e-3038.14Chaperone protein htpG OS=Shewanella frigidimarina... [more]
HTPG_PSESM8.764e-3036.94Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PSEF58.764e-3037.91Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_MYCLE8.764e-3036.36Chaperone protein htpG OS=Mycobacterium leprae GN=... [more]
HTPG_SHEPC1.145e-2938.60Chaperone protein htpG OS=Shewanella putrefaciens ... [more]
HTPG_SHEB91.145e-2938.14Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB81.145e-2938.14Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_RHOFD1.495e-2937.62Chaperone protein htpG OS=Rhodoferax ferrireducens... [more]
HTPG_PSEU21.495e-2936.53Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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