FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_STRCO (Chaperone protein htpG OS=Streptomyces coelicolor GN=htpG PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.420e-29
Identity = 78/219 (35.62%), Postives = 117/219 (53.42%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKK--MKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            F   L  G+  DS N+  +     + ST   +E T+LKDYV RMKEGQ+DIYY+TGES++A+ENSP +E  + KG EVL + DA+DE  V  + E+EGK L S  K  + L  +E +K    KE   E++ GL   + + LG               P C+V+     T  +E + +A             +K+ +E+NPE+ +++ L  RA  D+ D+
Sbjct:  387 FGAVLKEGLVTDSDNRDAILAACSFASTHDAEEPTALKDYVERMKEGQDDIYYMTGESRQAIENSPHMEAFRAKGVEVLLLTDAVDEVWVDAVGEYEGKTLRSVAKGEIDLSGTEADKSDAEKEKQGEEYAGLLGWMTEHLGEEVKEVRLSSRLTVSPACVVSDAGELTPALENMYRAMGQE------VPGAKRILELNPEHQLVKSL-NRAWTDRQDR 598          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHESW (Chaperone protein htpG OS=Shewanella sp. (strain W3-18-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.420e-29
Identity = 82/215 (38.14%), Postives = 113/215 (52.56%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQ  IYYI  +S  A  NSP LE L+KK  EVL M + IDE+ +  L E++ K+L S T+  L+L E ED  EK+ +E L E+   L + IK  LG               P C+VTGE   +  M ++M+A              K T E+NP +P++  L    D
Sbjct:  387 FGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSYDAAANSPHLELLRKKDIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGTKVADVKVTSRLTDTPACVVTGEGEMSTQMIKLMQAAG------QPVPEVKPTFEVNPAHPLVSRLNDLQD 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ACISJ (Chaperone protein htpG OS=Acidovorax sp. (strain JS42) GN=htpG PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.420e-29
Identity = 77/210 (36.67%), Postives = 112/210 (53.33%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK--AQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F   L  G+ ED  N+ +LA+LLR+ ST S     S  DY  RMKEGQ  IYYIT ++  A +NSP LE  KKKG EVL M D +DE+A+  L++F+G  L S  K  + L + +D  EKK  E   E F+ +   +K+ L                P CLV  + G +  + R++K   Q+  D        +K  +E+NPE+ ++++L
Sbjct:  409 FGAVLKEGLGEDFANRERLAKLLRFASTTSDTPSVSFADYKARMKEGQEAIYYITADTLAAAKNSPQLEVFKKKGIEVLLMTDRVDEWALNYLQDFDGTPLQSVAKGAVDLGKLQDEAEKKAAEEAAEAFKPMLAKLKEALKDKAEDVRVTTRLVDSPACLVVQDGGMSTQLARLLKQAGQSAPD--------AKPVLEVNPEHALVKKL 610          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_THICR (Chaperone protein htpG OS=Thiomicrospira crunogena (strain XCL-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.690e-29
Identity = 77/217 (35.48%), Postives = 112/217 (51.61%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELT---SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   +  G+ ED  NK K+A+LLR+ ST      T   SL+DY+ RM EGQ  IYYIT ++  A   SP LE  +KKG EVL + D IDE+ V  L EFEGK+L S T   LK  + E +K++ E  K+  E L + +K  +                P C+V+ E   +A+M R+M+               K  +E+NP++ ++++L    D  K
Sbjct:  382 FGNVMKEGVIEDFANKDKIAKLLRFSSTHESSGPTQRVSLQDYIDRMGEGQEAIYYITADTYAAATGSPHLEMFRKKGIEVLLLTDRIDEWLVSHLTEFEGKQLKSVTSADLKEFDEEADKELSEEDKKAREALTEKVKKAIEDQVSDVKITHRLTDSPACVVSAEGDISAHMARMMEQMG------QAMPKQKPVLELNPDHALVKKLDSLEDEPK 592          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_VIBVY (Chaperone protein htpG OS=Vibrio vulnificus (strain YJ016) GN=htpG PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.266e-28
Identity = 77/211 (36.49%), Postives = 115/211 (54.50%), Query Frame = 2
Query:   26 GIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE---KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            G  ED  N+ K+A LLR+ ST+  S ++  SL+ YV RMKEGQ+ IYY+T +S  A +NSP LE+ K KG EV+ M D IDE+ +  L EF+GK+  S TK GL L + EDE   +K KET +++F+ + +  K  LG               P  +VT ++     M +++ A              K   EINP + +++++   AD +
Sbjct:  393 GPAEDYANREKVAALLRFASTEVDSAEQTVSLESYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGLEVILMFDRIDEWLMNYLTEFDGKQFQSITKAGLDLSQFEDEQEKEKQKET-EQEFQSVVERTKSYLGDRVKEVRTTFKLANTPAVVVTDDFEMGTQMAKLLAAAG------QAVPEVKYIFEINPNHTLVKQMADEADEE 596          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_XANCP (Chaperone protein htpG OS=Xanthomonas campestris pv. campestris GN=htpG PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28
Identity = 80/220 (36.36%), Postives = 113/220 (51.36%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGL---KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + L  G  ED  N+ K+A LLR+ ST   +G +  +L DYV RM EGQ+ +YY+TGES   +++SP LE  +KKG EVL + D IDE+ +  L EF+ K  V   +  L   KLD  ED+K  +E  K K EGL   IK  LG               P  L  G+      M ++++A      S      +K   E NP +P++E+L    D D+
Sbjct:  383 NFGQALKEGPAEDYANREKVAGLLRFSSTHDTTGAQSVALADYVGRMTEGQDKLYYLTGESYAQIKDSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDSKSFVDVARGDLDLGKLDSEEDKKAQEEVAKSK-EGLASRIKAALGDDVAEVRVSHRLTDSPAILAIGQGDLGLQMRQLLEA------SGQAVPETKPVFEFNPAHPLIEKLDAEQDMDR 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_XANC8 (Chaperone protein htpG OS=Xanthomonas campestris pv. campestris (strain 8004) GN=htpG PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28
Identity = 80/220 (36.36%), Postives = 113/220 (51.36%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGL---KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + L  G  ED  N+ K+A LLR+ ST   +G +  +L DYV RM EGQ+ +YY+TGES   +++SP LE  +KKG EVL + D IDE+ +  L EF+ K  V   +  L   KLD  ED+K  +E  K K EGL   IK  LG               P  L  G+      M ++++A      S      +K   E NP +P++E+L    D D+
Sbjct:  383 NFGQALKEGPAEDYANREKVAGLLRFSSTHDTTGAQSVALADYVGRMTEGQDKLYYLTGESYAQIKDSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDSKSFVDVARGDLDLGKLDSEEDKKAQEEVAKSK-EGLASRIKAALGDDVAEVRVSHRLTDSPAILAIGQGDLGLQMRQLLEA------SGQAVPETKPVFEFNPAHPLIEKLDAEQDMDR 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_VIBHB (Chaperone protein htpG OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=htpG PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28
Identity = 80/223 (35.87%), Postives = 119/223 (53.36%), Query Frame = 2
Query:    2 SFSKNLNL----GIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE---KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            SF K   L    G+ ED  NK K+A LLR+ ST+  S ++   L  YV RMKEGQ+ IY++T +S  A +NSP LE+ + KG EV+ M D IDE+ +  L EF+GK+  S TK GL L + EDE   +K KET +E+F+ + +  +  LG               P  +VT ++     M ++++A              K   EINPE+ +++ +   AD +
Sbjct:  381 SFWKEFGLVMKEGVAEDMANKEKVAGLLRFASTEVDSAEQTVGLASYVERMKEGQDKIYFLTADSYAAAKNSPHLEQFRAKGIEVILMFDRIDEWLMNYLTEFDGKQFQSITKAGLDLSKFEDEAEKEKQKET-EEEFKSVVERTQSYLGDRVKEVRTTFKLATTPAVVVTDDFEMGTQMAKLLEAAG------QAVPEVKYIFEINPEHALVKRMADEADEE 596          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SACD2 (Chaperone protein htpG OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=htpG PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28
Identity = 75/218 (34.40%), Postives = 117/218 (53.67%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F + L  G  ED  NK K+A+LLR+ +T   + ++  SL  Y+ RMKEGQ+ IYY+  E+    +NSP LE  +KKG EVL + + ID++ +G L E++GK+     K  L L   +SE++KK +E ++E      + +K  L                P CLV GE+   A M R+++A             SK  +EINP +P++++L +  D D+
Sbjct:  385 FGEVLKEGPAEDFANKEKIAKLLRFATTHKNTNEQDQSLDAYIERMKEGQDKIYYVVAENFNTAKNSPHLEVFRKKGIEVLLLSNRIDDWLMGHLMEYDGKQFQDVGKGSLDLGKLDSEEDKKEQEKVEEAMAPFVERMKAALAEQVEEVRITHRLTESPACLVVGEHDMGAQMRRLLEAAG------QAVPESKPIIEINPTHPLVQKLDQEQDEDR 596          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28
Identity = 76/217 (35.02%), Postives = 115/217 (53.00%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD-ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            F + +  G+  D  N+  L +L  + ST S +E T+L  YV RMKEGQ  I+Y TGE+++ +  SP LE  K KGYEVL + D +DE  VG + EF+GK L S  K  + L  E E+ +  +E  +++F  L   +KD L                P CL+T  +G T  + R+ +A      S       K+ +E+NP++P++  LR +A  D+ D
Sbjct:  394 FGRVVKEGLLSDFDNQETLLQLCSFASTHSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAEREEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGITPALARLYRA------SGQDIPVGKRILELNPKHPLVTGLR-QAHQDRAD 603          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_STRCO7.420e-2935.62Chaperone protein htpG OS=Streptomyces coelicolor ... [more]
HTPG_SHESW7.420e-2938.14Chaperone protein htpG OS=Shewanella sp. (strain W... [more]
HTPG_ACISJ7.420e-2936.67Chaperone protein htpG OS=Acidovorax sp. (strain J... [more]
HTPG_THICR9.690e-2935.48Chaperone protein htpG OS=Thiomicrospira crunogena... [more]
HTPG_VIBVY1.266e-2836.49Chaperone protein htpG OS=Vibrio vulnificus (strai... [more]
HTPG_XANCP1.653e-2836.36Chaperone protein htpG OS=Xanthomonas campestris p... [more]
HTPG_XANC81.653e-2836.36Chaperone protein htpG OS=Xanthomonas campestris p... [more]
HTPG_VIBHB1.653e-2835.87Chaperone protein htpG OS=Vibrio harveyi (strain A... [more]
HTPG_SACD21.653e-2834.40Chaperone protein htpG OS=Saccharophagus degradans... [more]
HTPG_MYCA11.653e-2835.02Chaperone protein htpG OS=Mycobacterium avium (str... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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