FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ALISL (Chaperone protein htpG OS=Aliivibrio salmonicida (strain LFI1238) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.159e-28
Identity = 77/217 (35.48%), Postives = 117/217 (53.92%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + L  G+ ED  NK K+A LLR+ ST   S ++  SL  YV RMKE Q+ I+Y+T +S  A +NSP LE+ K KG EV+ M D IDE+ +  L EF+GK+  S TK GL L   E+E EK+ ++   E+F+ + +  K  LG               P  +VT ++     M ++++A       +      K   EINPE+ +++++   AD +
Sbjct:  385 FGQVLKEGLAEDFANKDKIAGLLRFASTNKDSSEQAISLASYVERMKEDQDKIFYLTSDSYAAAKNSPHLEQFKSKGIEVVLMYDRIDEWLMSYLTEFDGKQFQSITKAGLDLSKFENEAEKEKQKETTEEFKSVVERTKAYLGDRVKEVRTTFKLATTPAVVVTDDFEMGTQMAKLLEAAGQAAPEV------KYIFEINPEHALIKQMADEADEE 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ACIAD (Chaperone protein htpG OS=Acinetobacter sp. (strain ADP1) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.159e-28
Identity = 77/217 (35.48%), Postives = 117/217 (53.92%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK--AQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F   L  G+ ED TN+ ++ +LLRY ++   +  TS  DY  RMKEGQ  IYY++ +S  A +NSP LE  KKKG EVL M + +DE+A+  + EF+G  L + +K  + L + +D  EKK  E   E+F+ +   + D L                P CLVT +   +  + R++K   QA+ +        SK  +EINPE+P++++L   A  D
Sbjct:  398 FGSVLKEGLGEDFTNRERILKLLRYATSNQDEISTSFADYKARMKEGQKAIYYVSADSLAAAKNSPQLELFKKKGIEVLLMSERVDEWAMNFVHEFDGTPLQNVSKGAVDLGDLQDAEEKKALEQAAEQFKPVVDKLTDALKDKTKEVRVTTRLVDSPACLVTSDGELSPQLIRMLKQAGQAVPE--------SKPILEINPEHPLVQKLEGSAQFD 606          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_VIBVU (Chaperone protein htpG OS=Vibrio vulnificus GN=htpG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28
Identity = 76/211 (36.02%), Postives = 114/211 (54.03%), Query Frame = 2
Query:   26 GIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE---KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            G  ED  N+ K+A LLR+ ST+  S ++  SL+ YV RMKEGQ+ IYY+T +S  A +NSP LE+ K KG EV+ M D IDE+ +  L EF+GK+  S TK GL L + EDE   +K KET +++F+ + +  K  LG               P  +VT ++     M +++ A              K   EINP + +++++    D +
Sbjct:  393 GPAEDYANREKVASLLRFASTEVDSAEQTVSLESYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGLEVILMFDRIDEWLMNYLTEFDGKQFQSITKAGLDLSQFEDEQEKEKQKET-EQEFQSVVERTKSYLGDRVKEVRTTFKLANTPAVVVTDDFEMGTQMAKLLAAAG------QAVPEVKYIFEINPNHTLVKQMADETDEE 596          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28
Identity = 75/217 (34.56%), Postives = 115/217 (53.00%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD-ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            F + +  G+  D  N+  L +L  + ST S +E T+L  YV RMKEGQ  I+Y TGE+++ +  SP LE  K KGYEVL + D +DE  VG + EF+GK L S  K  + L  E E+ +  ++  +++F  L   +KD L                P CL+T  +G T  + R+ +A      S       K+ +E+NP++P++  LR +A  D+ D
Sbjct:  394 FGRVVKEGLLSDFDNQETLVQLCSFASTHSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGITPALARLYRA------SGQDIPVGKRILELNPKHPLVTGLR-QAHQDRAD 603          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BURS3 (Chaperone protein htpG OS=Burkholderia sp. (strain 383) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28
Identity = 76/220 (34.55%), Postives = 123/220 (55.91%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            +F + L  G+ ED  N+ ++A+LLR+ ST    +    SL DYV+RMK  Q+ IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L+EF+GK L S  +  L L E +++EKK +E   E  + + + +K+ LG               P CLV  +   +  ++R++KA      +M      +  +EINPE+ ++++L K   AD  D
Sbjct:  384 AFGQVLKEGLGEDHANRERIAKLLRFASTHGDTDAQDVSLADYVSRMKPEQSRIYYVTADAWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLQEFDGKPLASVARGDLDLGELNDEEKKAQEEAGEAIKPVVEKMKEALGDKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAM------QPILEINPEHALVKQL-KADSADFGD 596          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSM (Chaperone protein htpG OS=Magnetococcus sp. (strain MC-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28
Identity = 80/226 (35.40%), Postives = 118/226 (52.21%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELT--SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD----------ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G+ ED  NK ++A+L R+ +T  G+ +   +L DYV RMKEGQ  IYY+TGES +A  +SP LE  +KKG EVL + D +DE+ V  L EF+GK L + TK  L L           + E EK  +E LK   E + KV++  +                P CLV   +  +A +ER++K             ++K+ +EINP + +++ L   AD +K
Sbjct:  391 FGMVLKEGMIEDFANKERIAKLCRFSTTHDGERVPKIALADYVERMKEGQEAIYYVTGESFEACSSSPHLEIFRKKGIEVLLLSDRVDEWTVTHLTEFDGKPLQAITKGELDLSKFAGGEEEAKDEEAEKAQEEALKPITERMAKVLEGQV----KEVRLSHRLTESPACLVGDAHDMSATLERLLKEAGQE------VPTAKRILEINPSHALLKRLADEADEEK 606          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PSYIN (Chaperone protein htpG OS=Psychromonas ingrahamii (strain 37) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.809e-28
Identity = 77/217 (35.48%), Postives = 115/217 (53.00%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + L  G  EDS+NK K+ +L R+ ST+  S ++  SL  Y++RM EGQ+ IYYIT +S  A +NSP LE L++KG EVL + D IDE+ +  L E++GK   S T+  L L   +SE++KK +E  + +F    + +K VLG               P C+V      +  M ++M               SK   E+NPE+ ++ +L   AD D
Sbjct:  387 FGQVLKEGPAEDSSNKEKIGKLFRFSSTETDSTEQTVSLDAYISRMTEGQDKIYYITADSFNAAKNSPHLEVLREKGIEVLLLSDRIDEWLLSHLPEYDGKTFTSVTQGDLDLGKLDSEEKKKEQEKQETEFASFVERVKAVLGDKVKDVRLTHRLTSTPSCIVADNDDMSTQMAKLMAQMG------QPVPESKPVFELNPEHVMIVKLADMADED 597          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PHOPR (Chaperone protein htpG OS=Photobacterium profundum GN=htpG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.203e-28
Identity = 77/217 (35.48%), Postives = 119/217 (54.84%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + L  G  ED +N+ K+A LLR+ ST +   D+  S+ DYV+RMKEGQ  IY++T +S  A +NSP LE+ + KG EV+ M D IDE+ + QL EF+GK   + TK  L L   E+E++K+ ++   E+F+ + +  K  LG               P  +VT E      M +++ A A  D     Y+      EINPE+ +++++   AD +
Sbjct:  386 FGQVLKEGPAEDFSNREKIANLLRFSSTHNDTADQTVSVADYVSRMKEGQEKIYFLTADSFTAAKNSPHLEQFRAKGLEVILMHDRIDEWLMSQLPEFDGKPFQAITKADLDLSKFENEEDKEKQKEAAEEFKSVVERAKGYLGTRVKDVRTTFKLHDTPAVVVTDENEMGTQMAKLL-AAAGHDAPEVQYI-----FEINPEHGLVKQMANEADEE 596          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BURCM (Chaperone protein htpG OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.203e-28
Identity = 72/210 (34.29%), Postives = 118/210 (56.19%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F + L  G+ ED  N+ ++A+LLR+ ST    +    SL DYV+RMK  Q+ IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L E +++EKK +E   E  + + + +K+ LG               P CLV  +   +  ++R++KA      +M      +  +EINPE+ ++++L
Sbjct:  384 AFGQVLKEGLGEDHANRERIAKLLRFASTHGDTDAQDVSLADYVSRMKPEQSKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGELNDEEKKAQEQAGEAIKPVVEKMKEALGDKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAM------QPILEINPEHALVKQL 587          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BURCH (Chaperone protein htpG OS=Burkholderia cenocepacia (strain HI2424) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.203e-28
Identity = 72/210 (34.29%), Postives = 118/210 (56.19%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F + L  G+ ED  N+ ++A+LLR+ ST    +    SL DYV+RMK  Q+ IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L E +++EKK +E   E  + + + +K+ LG               P CLV  +   +  ++R++KA      +M      +  +EINPE+ ++++L
Sbjct:  384 AFGQVLKEGLGEDHANRERIAKLLRFASTHGDTDAQDVSLADYVSRMKPEQSKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGELNDEEKKAQEQAGEAIKPVVEKMKEALGDKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAM------QPILEINPEHALVKQL 587          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_ALISL2.159e-2835.48Chaperone protein htpG OS=Aliivibrio salmonicida (... [more]
HTPG_ACIAD2.159e-2835.48Chaperone protein htpG OS=Acinetobacter sp. (strai... [more]
HTPG_VIBVU2.819e-2836.02Chaperone protein htpG OS=Vibrio vulnificus GN=htp... [more]
HTPG_MYCPA2.819e-2834.56Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_BURS32.819e-2834.55Chaperone protein htpG OS=Burkholderia sp. (strain... [more]
HTPG_MAGSM3.682e-2835.40Chaperone protein htpG OS=Magnetococcus sp. (strai... [more]
HTPG_PSYIN4.809e-2835.48Chaperone protein htpG OS=Psychromonas ingrahamii ... [more]
HTPG_PHOPR8.203e-2835.48Chaperone protein htpG OS=Photobacterium profundum... [more]
HTPG_BURCM8.203e-2834.29Chaperone protein htpG OS=Burkholderia ambifaria (... [more]
HTPG_BURCH8.203e-2834.29Chaperone protein htpG OS=Burkholderia cenocepacia... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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