FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BURCA (Chaperone protein htpG OS=Burkholderia cenocepacia (strain AU 1054) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.203e-28
Identity = 72/210 (34.29%), Postives = 118/210 (56.19%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F + L  G+ ED  N+ ++A+LLR+ ST    +    SL DYV+RMK  Q+ IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L E +++EKK +E   E  + + + +K+ LG               P CLV  +   +  ++R++KA      +M      +  +EINPE+ ++++L
Sbjct:  384 AFGQVLKEGLGEDHANRERIAKLLRFASTHGDTDAQDVSLADYVSRMKPEQSKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGELNDEEKKAQEQAGEAIKPVVEKMKEALGDKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAM------QPILEINPEHALVKQL 587          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_VIBF1 (Chaperone protein htpG OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=htpG PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.071e-27
Identity = 77/218 (35.32%), Postives = 119/218 (54.59%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE---KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + L  G+ ED  NK K+A LLR+ +T+  S ++   L  YV RMKE Q+ I+Y+T +S  A +NSP LE+ K KG EV+ M D IDE+ +  L EF+GK+  S TK GL L + EDE   +K KET +E+F+ + +  K  LG               P  +VT ++     M ++++A       +      K   EINP++ +++++   AD +
Sbjct:  384 FGQVLKEGLAEDLANKEKIAGLLRFATTEKDSSEQALGLAGYVERMKEEQDKIFYLTADSYAAAKNSPHLEQFKAKGIEVVLMYDRIDEWLMSYLTEFDGKQFQSITKAGLDLSKFEDEAEKEKHKET-EEEFKSVVERTKSYLGDRVKEVRTTFKLATTPAVVVTDDFEMGTQMAKLLEAAGQAAPEV------KYIFEINPDHALVKQMADEADEE 594          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_TREDE (Chaperone protein htpG OS=Treponema denticola GN=htpG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27
Identity = 72/217 (33.18%), Postives = 121/217 (55.76%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK---SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD-ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F++ L  G++ D  ++ +LA+L+R+ +T      DE TS  DYV+RMK  Q  IYYITGE +K +  SP LE  K+KG+EVL M D ID+  +  L +++  +L +A + G   +  +E+E K  E  ++ F+ + + IK+VLG               P C+V  E   +  MER+M+A    + S     + K  +E+N ++P++++L+   D +
Sbjct:  390 FNRPLKEGLYSDYEHREELADLVRFKTTSPEVKEDEWTSFADYVSRMKSDQKAIYYITGEDEKTLRQSPHLEVYKQKGFEVLIMPDEIDDIIIPSLGKYKDWELKAANRAGSDKELNTEEETKEAEKKEKDFKPVLEKIKEVLGDKVKEVRFSKRLSDSPSCIVVDETDPSLQMERMMRAMGQFNTS-----AVKPILEVNADHPLVQKLKDSKDKE 601          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_MYCUA (Chaperone protein htpG OS=Mycobacterium ulcerans (strain Agy99) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27
Identity = 75/219 (34.25%), Postives = 116/219 (52.97%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD-ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK-RADADKNDK 655
            F K +  G+  D  N+  L E+  + ST S +E T+L  YV RMKE Q  I++ TG+S++ +  SP LE  + KGYEVL + + +DE  VG + EF+GK L S  K  + LD + E  +  +E  +++F  L   +K+ LG               P CL+T  +G T  + RI +A              K+T+E+NP +P++  LR+ +A AD + K
Sbjct:  395 FGKVVKEGLLADFDNRETLLEISSFASTHSEEEPTTLAGYVERMKEDQTQIFFATGDSRQQILKSPHLEAFRAKGYEVLLLTEPVDEVWVGVVNEFDGKPLQSVAKGEVDLDSDGEGSEAEREEQQKEFADLLGWLKETLGEQVKEVRLSTRLTESPACLITDTFGITPALARIYRATG------QDVPVGKRTLELNPTHPLVIGLRQAQASADDDAK 607          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_MYCGI (Chaperone protein htpG OS=Mycobacterium gilvum (strain PYR-GCK) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27
Identity = 75/212 (35.38%), Postives = 114/212 (53.77%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE----KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK 628
            F + L  G+  D+ N+  L  +  + ST+S DE T+L +YV RM EGQ  I+Y  GES++ + NSP LE  K KGYEVL + D +DE  V  + EF+GK L S  K  + LD SE +K+ +ET ++    +F  +   + +VLG               P CL+T  +G T  + R+ +A      S       K+ +E+NP +P++  LR+
Sbjct:  395 FGRVLKEGLLSDTDNQETLLRVSSFASTRSDDEPTTLAEYVERMPEGQTQIFYAAGESRQQLLNSPHLEAFKAKGYEVLLLTDPVDEVWVESIHEFDGKPLQSVAKGEVDLD-SEADKEAQETERQQREKEFADVIAWLTEVLGDHVKEVRLSTRLTDSPACLITDTFGITPALARMYRA------SGQPVPVEKRILELNPTHPLVVGLRE 599          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BURTA (Chaperone protein htpG OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27
Identity = 72/211 (34.12%), Postives = 114/211 (54.03%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F + L  G+ ED  N+ ++A+LLR+ ST    +    +L DYV RMK  Q  IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L   ++DEKK +E   E  + +   +K+ LG               P CLV  +   +  ++R++KA      S       +  +EINPE+P+++ L+
Sbjct:  384 AFGQVLKEGVGEDHANRERVAKLLRFASTHGDTDAQDVALADYVARMKPEQTKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGGKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPSF------QPILEINPEHPLVKALK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BURP6 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 668) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27
Identity = 73/211 (34.60%), Postives = 114/211 (54.03%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F + L  GI ED  N+ ++A+LLR+ ST    +    +L DYV RMK  Q  IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L   ++DEKK +E   E  + +   +K+ LG               P CLV  +   +  ++R++KA            S +  +EINPE+P+++ L+
Sbjct:  384 AFGQVLKEGIGEDHANRERVAKLLRFASTHGDTDAQDVALADYVARMKPEQTKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGEKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAG------QSAPSFQPILEINPEHPLVKALK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BURPS (Chaperone protein htpG OS=Burkholderia pseudomallei GN=htpG PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27
Identity = 72/211 (34.12%), Postives = 114/211 (54.03%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F + L  G+ ED  N+ ++A+LLR+ ST    +    +L DYV RMK  Q  IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L   ++DEKK +E   E  + +   +K+ LG               P CLV  +   +  ++R++KA            S +  +EINPE+P+++ L+
Sbjct:  384 AFGQVLKEGVGEDHANRERVAKLLRFASTHGDTDAQDVALADYVARMKPEQTKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGEKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAG------QSAPSFQPILEINPEHPLVKALK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BURP1 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 1710b) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27
Identity = 72/211 (34.12%), Postives = 114/211 (54.03%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F + L  G+ ED  N+ ++A+LLR+ ST    +    +L DYV RMK  Q  IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L   ++DEKK +E   E  + +   +K+ LG               P CLV  +   +  ++R++KA            S +  +EINPE+P+++ L+
Sbjct:  384 AFGQVLKEGVGEDHANRERVAKLLRFASTHGDTDAQDVALADYVARMKPEQTKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGEKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAG------QSAPSFQPILEINPEHPLVKALK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BURMS (Chaperone protein htpG OS=Burkholderia mallei (strain SAVP1) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27
Identity = 72/211 (34.12%), Postives = 114/211 (54.03%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F + L  G+ ED  N+ ++A+LLR+ ST    +    +L DYV RMK  Q  IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L   ++DEKK +E   E  + +   +K+ LG               P CLV  +   +  ++R++KA            S +  +EINPE+P+++ L+
Sbjct:  384 AFGQVLKEGVGEDHANRERVAKLLRFASTHGDTDAQDVALADYVARMKPEQTKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGEKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAG------QSAPSFQPILEINPEHPLVKALK 588          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_BURCA8.203e-2834.29Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_VIBF11.071e-2735.32Chaperone protein htpG OS=Vibrio fischeri (strain ... [more]
HTPG_TREDE2.387e-2733.18Chaperone protein htpG OS=Treponema denticola GN=h... [more]
HTPG_MYCUA2.387e-2734.25Chaperone protein htpG OS=Mycobacterium ulcerans (... [more]
HTPG_MYCGI2.387e-2735.38Chaperone protein htpG OS=Mycobacterium gilvum (st... [more]
HTPG_BURTA2.387e-2734.12Chaperone protein htpG OS=Burkholderia thailandens... [more]
HTPG_BURP62.387e-2734.60Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURPS3.117e-2734.12Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP13.117e-2734.12Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURMS3.117e-2734.12Chaperone protein htpG OS=Burkholderia mallei (str... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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