FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_COLP3 (Chaperone protein htpG OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25
Identity = 76/219 (34.70%), Postives = 117/219 (53.42%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA--QALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + L  G  ED  NK ++A LLR+ ST   S  +  SL  Y+ RMKEGQ+ IY++  +S +A +NSP LE  +KKG EVL M D IDE+ V  L EF+GK+L S T+ GL L + +D   K+ +E L+++++ + K IK  L                P C+V  +   ++ M ++M +  Q + D        +    EIN E+ +++ +    D D
Sbjct:  403 FGQVLKEGPAEDHANKEQVAGLLRFASTHEDSTTQNVSLASYIERMKEGQDKIYFVVADSFEAAKNSPHLEVFRKKGIEVLLMSDRIDEWLVSHLTEFDGKQLQSVTRGGLDLGDMDDAETKEAQEKLEKEYDSVVKRIKASLDGKVKEVKLSQRLTDSPACIVADDDDMSSQMAKLMASVGQEVPD--------TLPIFEINGEHALVKHVADEQDDD 613          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_HAES2 (Chaperone protein htpG OS=Haemophilus somnus (strain 2336) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.310e-25
Identity = 76/217 (35.02%), Postives = 112/217 (51.61%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  NK  +A+LLR+ S+K  S ++  SL+DYV RMKEGQ  IYYIT +S  A +NSP LE   KK  EVL + D IDE+ +  L EF+GK+L   TK  L L +  D+++ ++  ++K F    + +K +LG               P  + T     T  M ++  A              K T E+NPE+ +++++   AD D+
Sbjct:  381 FGLVLKEGPSEDFANKENIAKLLRFASSKNDSSEQTVSLEDYVARMKEGQKAIYYITADSYIAAKNSPHLELFNKKDIEVLLLSDRIDEWMLSYLTEFDGKQLQPITKADLDLGDLADKEQEEQKEQDKTFSSFIERVKTLLGERVKDVRLTHRLTDTPAVVSTDNDQMTTQMAKLFAAAG------QPVPEVKYTFELNPEHHLVKKVADFADEDE 591          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BACSU (Chaperone protein htpG OS=Bacillus subtilis GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.310e-25
Identity = 72/217 (33.18%), Postives = 116/217 (53.46%), Query Frame = 2
Query:    2 SFSKNLNLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVT-GEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            SF + L  G++ D   NK +L +LL ++S+K   +L SL +YV+RM E Q  IYY TG+S   +E  P  E +  KGYE+LY  + IDE+A+  L  ++ K+  S +   L +D  ED+K+ +E  + K++ L + +K++L                P CL   GE   T  ME+I+ A     N     + ++K +EINP + + + L+   + DK
Sbjct:  382 SFGRQLKFGVYNDFGANKDQLKDLLLFYSSKE-KKLVSLDEYVSRMPEEQKFIYYATGDSYDRIEKLPQTEMVADKGYEILYFTEDIDEFAIKMLASYQEKEFKSVSSGDLGIDTDEDQKQSEEE-ESKYKDLFEEMKNILSDKVKNVRISKRLKSHPVCLAADGEV--TIEMEKILNAMPDSQN-----VKAEKVLEINPNHEVFQTLQDAFEQDK 589          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_AGGAC (Chaperone protein htpG OS=Aggregatibacter actinomycetemcomitans GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.710e-25
Identity = 78/214 (36.45%), Postives = 109/214 (50.93%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL-DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   L  G  ED  NK  +A+LLR+ ST   S ++  SL+DYV+RMKEGQ  IYYIT +S  A  NSP LE   KKG EVL + D IDE+ +  L EF+GK L S TK  L L D ++ E + ++   E F    + +K +LG               P  + T     T  M ++  A              K T E+NPE+ +++++ + AD
Sbjct:  381 FGLVLKEGPAEDFANKEAIAKLLRFASTHNDSSEQNVSLEDYVSRMKEGQKAIYYITADSYVAARNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKPLQSITKADLDLGDLADKEAEEQKAQDESFGSFVERVKTLLGGRVKEVRLTHRLTDTPAVVSTDNDQMTTQMAKLFAAAG------QPVPEVKYTFELNPEHHLVKKVAEIAD 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ROSDO (Chaperone protein htpG OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=htpG PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25
Identity = 70/215 (32.56%), Postives = 111/215 (51.63%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE----KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRA 634
            +F   L  G+ ED   + ++ E+ R+ STKSGD +TSL DY++R KEGQ+ IYYI G+  + +  SP LE  + K  EVL + D +DE+ +  + EFEGK   S T+    LD+  + +K  +  +E        L   +K  LG               P CL+  E     N+ER++K      ++M       + +E+NP++ I+ +L +RA
Sbjct:  366 NFGPVLKEGLIEDPALRDRILEICRFSSTKSGD-VTSLADYISRCKEGQDAIYYIAGDDARKIAQSPHLEGFRAKDVEVLLLSDHVDEFWLQHITEFEGKPFKSITRGAADLDKINEGEKADDAEEEAQAPDLNDLIAALKLELGASVKDVRPSKRLTDSPVCLIADEGDIDVNLERMLKRHGQLQDAM------PRVLELNPDHRIITKLAERA 573          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_RALEH (Chaperone protein htpG OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=htpG PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25
Identity = 71/217 (32.72%), Postives = 117/217 (53.92%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + L  GI ED  N  ++A+LLR+ ST +   ++  +L  YV RMKEGQ+ IYY+T ++  A +NSP LE  +KKG EVL + D +DE+ +  L+EF+GK+LVS  +  L L +   E EK  +E  +  ++ +    K VL                  CLV+ E   +  ++R++K    +         ++  +E+NPE+ ++++LR   + D
Sbjct:  387 FGQALKEGIGEDQANLERVAKLLRFASTHNDTAEQNVALAAYVGRMKEGQDKIYYVTADTWSAAKNSPHLEVFRKKGIEVLLLTDRVDEWMLSFLREFDGKELVSVARGDLDLGKLADEAEKAEQEKAEADWKDVVDRAKTVLDGKAKDVRVTLRLTASASCLVSDEGDMSGYLQRLLKQAGQK------APDAQPILELNPEHALVQKLRDLPEGD 597          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIN (Chaperone protein htpG OS=Haemophilus influenzae GN=htpG PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25
Identity = 76/214 (35.51%), Postives = 110/214 (51.40%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL-DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   L  G  ED  NK  +A+LLR+ ST +   ++  SL+DY+ RMKEGQ  IYYIT +S  A +NSP LE   KKG EVL + D IDE+ +  L EF+GK+L S TK  L L D ++ E + ++   E F    + +K++LG               P  + T     T  M ++  A              K T E+NPE+ +++++   AD
Sbjct:  381 FGLVLKEGPAEDFANKETVAKLLRFASTHNDGSEQTVSLEDYILRMKEGQKAIYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKQLQSITKADLDLGDLADKESETQKQQDEAFGSFIERVKNLLGERVKTVRLTHNLTDTPAVVSTDNDQMTTQMAKLFAAAG------QPVPEVKYTFELNPEHHLVKKVADIAD 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIG (Chaperone protein htpG OS=Haemophilus influenzae (strain PittGG) GN=htpG PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25
Identity = 76/214 (35.51%), Postives = 110/214 (51.40%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL-DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   L  G  ED  NK  +A+LLR+ ST +   ++  SL+DY+ RMKEGQ  IYYIT +S  A +NSP LE   KKG EVL + D IDE+ +  L EF+GK+L S TK  L L D ++ E + ++   E F    + +K++LG               P  + T     T  M ++  A              K T E+NPE+ +++++   AD
Sbjct:  381 FGLVLKEGPAEDFANKETIAKLLRFASTHNDGCEQTVSLEDYILRMKEGQKAIYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKQLQSITKADLDLGDLADKESETQKQRDEAFGSFIERVKNLLGERVKTVRLTHNLTDTPAVVSTDNDQMTTQMAKLFAAAG------QPVPEVKYTFELNPEHHLVKKVADIAD 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIE (Chaperone protein htpG OS=Haemophilus influenzae (strain PittEE) GN=htpG PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25
Identity = 76/214 (35.51%), Postives = 110/214 (51.40%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL-DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   L  G  ED  NK  +A+LLR+ ST +   ++  SL+DY+ RMKEGQ  IYYIT +S  A +NSP LE   KKG EVL + D IDE+ +  L EF+GK+L S TK  L L D ++ E + ++   E F    + +K++LG               P  + T     T  M ++  A              K T E+NPE+ +++++   AD
Sbjct:  381 FGLVLKEGPTEDFANKETVAKLLRFASTHNDGSEQAVSLEDYILRMKEGQKAIYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKQLQSITKADLDLGDLADKESETQKQQDEAFGSFIERVKNLLGERVKTVRLTHNLTDTPAVVSTDNDQMTTQMAKLFAAAG------QPVPEVKYTFELNPEHHLVKKVADIAD 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_POLSJ (Chaperone protein htpG OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=htpG PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.811e-25
Identity = 70/210 (33.33%), Postives = 110/210 (52.38%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK--AQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F   L  G+ ED  N+ +LA+LLR+ S+ +        DY  RMKEGQ+ IYY+T ++  A ++SP LE  +KKG EVL M D +DE+A+  L EF+G  L S  K  + L   + EDEKK  E  +  F+ +   +K+ L                P CLV  +   +  + R++K   QA+ +         K  +E+N ++P++++L
Sbjct:  385 FGAVLKEGLGEDFANRERLAKLLRFASSTTDTVSVGFADYKARMKEGQDAIYYVTADTLAAAKSSPQLEIFRKKGIEVLLMADRVDEWALNYLHEFDGTPLQSVAKGAVDLGKLQDEDEKKAAEEAQTHFKPILDKLKEALKDKAKDVRATTRLVDSPACLVVQDGDMSTQLARMLKQAGQAVPE--------VKPILEVNAQHPLVKKL 586          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_COLP31.003e-2534.70Chaperone protein htpG OS=Colwellia psychrerythrae... [more]
HTPG_HAES21.310e-2535.02Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_BACSU1.310e-2533.18Chaperone protein htpG OS=Bacillus subtilis GN=htp... [more]
HTPG_AGGAC1.710e-2536.45Chaperone protein htpG OS=Aggregatibacter actinomy... [more]
HTPG_ROSDO2.918e-2532.56Chaperone protein htpG OS=Roseobacter denitrifican... [more]
HTPG_RALEH2.918e-2532.72Chaperone protein htpG OS=Ralstonia eutropha (stra... [more]
HTPG_HAEIN2.918e-2535.51Chaperone protein htpG OS=Haemophilus influenzae G... [more]
HTPG_HAEIG2.918e-2535.51Chaperone protein htpG OS=Haemophilus influenzae (... [more]
HTPG_HAEIE2.918e-2535.51Chaperone protein htpG OS=Haemophilus influenzae (... [more]
HTPG_POLSJ3.811e-2533.33Chaperone protein htpG OS=Polaromonas sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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