FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSA (Chaperone protein htpG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=htpG PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23
Identity = 73/222 (32.88%), Postives = 108/222 (48.65%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEG-----LKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            +F   L  GI+ED   KT + EL R+ ST  GD LT+L DYV RMK+GQ+ IY ITG+    ++ SP LE    KG EVL + D IDE+ V  ++ +  K   S    G     +K  E  ++KK  E   ++   L + +K  LG                 CLV  E   + ++E++++A     N   G     + +EINP + +++ L  R  A   D
Sbjct:  367 AFGPVLKEGIYEDFERKTDILELCRFRSTH-GDGLTTLADYVARMKDGQDAIYTITGDDLDQLKKSPQLEGFAAKGVEVLLLTDPIDEFWVSAVRSYAEKDFRSVAAAGADLSKVKAPEGAEDKKADEAPADELTTLIEAVKLALGERVKDVRPSERLTESAVCLVAAEGEMSMHLEKMLRAH----NQAPG--ERARILEINPRHALIKGLAARVKAGGTD 581          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_PELLD (Chaperone protein htpG OS=Pelodictyon luteolum (strain DSM 273) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.658e-23
Identity = 70/219 (31.96%), Postives = 114/219 (52.05%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            +F   + +G++ D TN+ KL ELLR+ STK+G+ E  +LK+Y  RM   Q +IYY +G  +  +  +P LE  + KG EVL + D +D + +  + E++ K+L S  K    +D S+  K   E + E     L K+ ++ LG               P  LV+G+    + MER+MK   ++    AG    +K +E+NP +PI+  L     A+ N+
Sbjct:  373 AFGPIVKIGLNTDFTNRDKLIELLRFESTKTGEGEYVTLKEYAARMAPDQKEIYYHSGAGRAQLLANPNLEYFQDKGIEVLLLSDPVDVFVIPSIHEYDKKQLKSIEK--ADIDFSKATKDKTEPIAENLLVPLLKIFRETLGEGIEDVVESHRLVSSPVTLVSGKDAMDSQMERMMK--MMQQEMPAG----RKILEVNPSHPIIRNLSGMMMANDNN 583          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_DESDG (Chaperone protein htpG OS=Desulfovibrio desulfuricans (strain G20) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.658e-23
Identity = 69/215 (32.09%), Postives = 115/215 (53.49%), Query Frame = 2
Query:   32 HEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEY---AVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK----FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK--RADAD 643
            + D  N+ K   LLR++S+   DE  L SL DY+ R +EGQ  ++Y++  +++A   +P +E  ++KG EVLY+ +A DE+   ++G+  EFE +    A  + LK  +  ++K   E L E+       L   +K +LG               P CL + + G TA+ME++M+    +D S+      +K +EINP++P+   L +  RADAD
Sbjct:  379 YNDYINRDKFIPLLRFNSSALDDEKGLCSLDDYIGRAREGQKTVWYVSAPNREAARLNPHVEIFRRKGIEVLYLYEAADEFIMESLGKWNEFEFRSAEHADADALKDFDDVEKKDAPEALDEEGRKTLSSLLSHMKTLLGDKVEDVRESARLSDSPACLASKDGGMTASMEKLMRVMN-KDESV-----PRKVLEINPDHPLTRNLLRLYRADAD 587          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_CLOPE (Chaperone protein htpG OS=Clostridium perfringens GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23
Identity = 68/219 (31.05%), Postives = 112/219 (51.14%), Query Frame = 2
Query:    2 SFSKNLNLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            SF + L  G+++D   NK +L +LL ++S+K   ++ SL +YV RM E Q  IYY  GES + +E  P  E +  KGYE+LY  + +DE+A+  L  ++ K+  S +   L ++  E+ KK  E  K    G+ + +K+ LG               P CL + E   +  ME+I+ A           + ++K +E+N  + +   L+   DA +NDK
Sbjct:  382 SFGRQLKYGVYDDFGMNKDELKDLLMFYSSKE-KKMVSLAEYVERMAEDQKYIYYAVGESNERIEKMPQTEMVLDKGYEILYFTEDVDEFAIKMLMNYKEKEFKSVSSGDLGIESEEENKKENEENK----GIFEAMKEALGEKISAVKASSRLKNYPVCL-SSEGEVSIEMEKILSAMPNNQG-----VKAQKVLEVNTNHEVFNSLK---DALENDK 586          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_CLOP1 (Chaperone protein htpG OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23
Identity = 68/219 (31.05%), Postives = 112/219 (51.14%), Query Frame = 2
Query:    2 SFSKNLNLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            SF + L  G+++D   NK +L +LL ++S+K   ++ SL +YV RM E Q  IYY  GES + +E  P  E +  KGYE+LY  + +DE+A+  L  ++ K+  S +   L ++  E+ KK  E  K    G+ + +K+ LG               P CL + E   +  ME+I+ A           + ++K +E+N  + +   L+   DA +NDK
Sbjct:  382 SFGRQLKYGVYDDFGMNKDELKDLLMFYSSKE-KKMVSLAEYVERMAEDQKYIYYAVGESNERIEKMPQTEMVLDKGYEILYFTEDVDEFAIKMLMNYKEKEFKSVSSGDLGIESEEENKKENEENK----GIFEAMKEALGEKISAVKASSRLKNYPVCL-SSEGEVSIEMEKILSAMPNNQG-----VKAQKVLEVNTNHEVFNSLK---DALENDK 586          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_CHLTE (Chaperone protein htpG OS=Chlorobium tepidum GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23
Identity = 69/208 (33.17%), Postives = 110/208 (52.88%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   L +G++ D TN+ KL +LLR+ +TK+ + E  +LK+YV RM EGQ +IYY +G S+  +   P LE  +K+  EVL + D +D + +  + E++ K L S  K   ++D S  E + +    E   G+  + K+VLG               P  LV+G+    +  E++MK      N  A   S+KK +EIN  +PI+  L
Sbjct:  376 AFGTILKIGLNTDFTNRDKLIDLLRFETTKTVEGEYVTLKEYVGRMAEGQTEIYYHSGSSRAQMLAHPNLEYFRKRDIEVLLLSDPVDVFVIPSIFEYDKKPLKSIEK--AEIDMSTVEPEGERLSAEGTVGVISLFKEVLGERVADVVESRRLVSSPVTLVSGKDALDSQFEKMMKMM----NKDADMPSTKKILEINTAHPIIRNL 577          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ARCB4 (Chaperone protein htpG OS=Arcobacter butzleri (strain RM4018) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.946e-23
Identity = 76/216 (35.19%), Postives = 112/216 (51.85%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYM----VDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            + + L  G+++D TNK  + ELLRY S+K+   ++TSL+ Y  R    Q  IYYI GE++K + NSP LE  KK   EVL +    +D I   A+G  KE+E K + +   E  K+++SE+EKK    ++EKF+ +   IKD LG               P C+V       A+ +    A   R    A    S   +EINPE+ I+++L   AD
Sbjct:  390 YIRPLKEGVYQDYTNKEAILELLRYKSSKTEAGKMTSLEAYKERANSEQKAIYYIVGENEKVLRNSPLLESYKKNDIEVLILDDKEIDEIITPAIGAFKEWEFKDITAI--EPPKVEQSEEEKK---EVEEKFQDILSKIKDKLGDAVKDVKVTSRLSESPSCVVKD----AADAQMAAMAHMFRAMGQA-MPESAPILEINPEHEIVKKLNGCAD 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_YERPS (Chaperone protein htpG OS=Yersinia pseudotuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.355e-22
Identity = 71/214 (33.18%), Postives = 107/214 (50.00%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   L  G  ED +NK  +A+LLR+ ST   S  +  SL+DYV+RM EGQ  IYYIT +S  A ++SP LE  +KKG EVL + D IDE+ +  L EFEGK   S +K    L++  DE+  ++   EK  E   + +K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++   +  D
Sbjct:  378 FGMALKEGPAEDGSNKETIAKLLRFASTHTDSSAQTVSLEDYVSRMAEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQQAPEV------KYIFELNPDHGLVKRAAEVTD 585          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_YERPP (Chaperone protein htpG OS=Yersinia pestis (strain Pestoides F) GN=htpG PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.355e-22
Identity = 71/214 (33.18%), Postives = 107/214 (50.00%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   L  G  ED +NK  +A+LLR+ ST   S  +  SL+DYV+RM EGQ  IYYIT +S  A ++SP LE  +KKG EVL + D IDE+ +  L EFEGK   S +K    L++  DE+  ++   EK  E   + +K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++   +  D
Sbjct:  378 FGMALKEGPAEDGSNKETIAKLLRFASTHTDSSAQTVSLEDYVSRMAEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQQAPEV------KYIFELNPDHGLVKRAAEVTD 585          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_YERPN (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=htpG PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.355e-22
Identity = 71/214 (33.18%), Postives = 107/214 (50.00%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   L  G  ED +NK  +A+LLR+ ST   S  +  SL+DYV+RM EGQ  IYYIT +S  A ++SP LE  +KKG EVL + D IDE+ +  L EFEGK   S +K    L++  DE+  ++   EK  E   + +K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++   +  D
Sbjct:  378 FGMALKEGPAEDGSNKETIAKLLRFASTHTDSSAQTVSLEDYVSRMAEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQQAPEV------KYIFELNPDHGLVKRAAEVTD 585          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_MAGSA3.567e-2332.88Chaperone protein htpG OS=Magnetospirillum magneti... [more]
HTPG_PELLD4.658e-2331.96Chaperone protein htpG OS=Pelodictyon luteolum (st... [more]
HTPG_DESDG4.658e-2332.09Chaperone protein htpG OS=Desulfovibrio desulfuric... [more]
HTPG_CLOPE6.084e-2331.05Chaperone protein htpG OS=Clostridium perfringens ... [more]
HTPG_CLOP16.084e-2331.05Chaperone protein htpG OS=Clostridium perfringens ... [more]
HTPG_CHLTE6.084e-2333.17Chaperone protein htpG OS=Chlorobium tepidum GN=ht... [more]
HTPG_ARCB47.946e-2335.19Chaperone protein htpG OS=Arcobacter butzleri (str... [more]
HTPG_YERPS1.355e-2233.18Chaperone protein htpG OS=Yersinia pseudotuberculo... [more]
HTPG_YERPP1.355e-2233.18Chaperone protein htpG OS=Yersinia pestis (strain ... [more]
HTPG_YERPN1.355e-2233.18Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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