FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SODGM (Chaperone protein htpG OS=Sodalis glossinidius (strain morsitans) GN=htpG PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21
Identity = 72/214 (33.64%), Postives = 102/214 (47.66%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   L  G  ED TN   +A+LLR+ ST   S  +  SL++YV RM EGQ  IYYIT +S  A ++SP LE L+KKG EVL   D IDE+ +  L EF+GK   S +K    LD+  DE+  ++   EK  E   + +K  LG               P  + T     T  M ++  A       +      K   E+NP++ +++      D
Sbjct:  382 FGLVLKEGAGEDPTNGEAVAKLLRFASTHGDSPAQTVSLEEYVGRMVEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLFSDRIDEWMMSYLTEFDGKAFQSVSKADPSLDKLADEEDEEQKEVEKALEPFVERVKTYLGERVKEVRLTHRLTDTPAVVTTDADDMTTQMAKLFAAAGQAAPEI------KYIFELNPDHALVKRTANLGD 589          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHISS (Chaperone protein htpG OS=Shigella sonnei (strain Ss046) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHIFL (Chaperone protein htpG OS=Shigella flexneri GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTYTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHIDS (Chaperone protein htpG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHIBS (Chaperone protein htpG OS=Shigella boydii serotype 4 (strain Sb227) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ECOUT (Chaperone protein htpG OS=Escherichia coli (strain UTI89 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLI (Chaperone protein htpG OS=Escherichia coli (strain K12) GN=htpG PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLC (Chaperone protein htpG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL6 (Chaperone protein htpG OS=Escherichia coli O6 GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL5 (Chaperone protein htpG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_SODGM1.957e-2133.64Chaperone protein htpG OS=Sodalis glossinidius (st... [more]
HTPG_SHISS2.556e-2133.79Chaperone protein htpG OS=Shigella sonnei (strain ... [more]
HTPG_SHIFL2.556e-2133.79Chaperone protein htpG OS=Shigella flexneri GN=htp... [more]
HTPG_SHIDS2.556e-2133.79Chaperone protein htpG OS=Shigella dysenteriae ser... [more]
HTPG_SHIBS2.556e-2133.79Chaperone protein htpG OS=Shigella boydii serotype... [more]
HTPG_ECOUT2.556e-2133.79Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLI2.556e-2133.79Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLC2.556e-2133.79Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOL62.556e-2133.79Chaperone protein htpG OS=Escherichia coli O6 GN=h... [more]
HTPG_ECOL52.556e-2133.79Chaperone protein htpG OS=Escherichia coli O6:K15:... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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