FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ECOK1 (Chaperone protein htpG OS=Escherichia coli O1:K1 / APEC GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ECOHS (Chaperone protein htpG OS=Escherichia coli O9:H4 (strain HS) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ECO57 (Chaperone protein htpG OS=Escherichia coli O157:H7 GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ECO24 (Chaperone protein htpG OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   L  G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE  + E+ KE  + L   I   K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++      D  K
Sbjct:  378 FGLVLKEGPAEDFANQEAIAKLLRFASTYTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE--VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEV------KYIFELNPDHVLVKRAADTEDEAK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_NATTJ (Chaperone protein htpG OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21
Identity = 65/217 (29.95%), Postives = 117/217 (53.92%), Query Frame = 2
Query:    2 SFSKNLNLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 649
            SF   L  GI+ +   NK  L +LL ++S+K  +++ SL +Y++RM E Q  IYY TGES + ++  P  E +K KGYEVLY+ + +DE+A+  +  ++  +  S + + L LD SEDE+   E  KE ++G+   + ++L                P CL   E   +  ME+++++     N     + ++K +EIN  + + ++L +  + D++
Sbjct:  384 SFGTLLKYGIYSEFGQNKETLQDLLLFYSSKE-NKMVSLDEYISRMGEDQKYIYYATGESVERIDKLPQTEFVKDKGYEVLYLTEDVDEFAIKMMGSYQDVEFKSVSSKDLGLD-SEDEETSDEKEKE-YKGMFDKMAEILSDKVNTVRASERLKDHPVCL-ANEGEISIEMEKVLQSMPNNQN-----VQAEKALEINVNHDVFDKLTEAYEQDED 591          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_KLEP7 (Chaperone protein htpG OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21
Identity = 77/221 (34.84%), Postives = 110/221 (49.77%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE---KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            F   L  G  ED +N+  +A+LLR+ +T   S  +  SL++YV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S  K    LD+  DE  + E+ KE     E   + +K++LG               P  + T     +  M ++  A       +      K   E+NP +    +L KRA AD  D
Sbjct:  378 FGLVLKEGPAEDPSNQEAIAKLLRFATTHTDSSAQTVSLEEYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMSYLTEFDGKAFQSVAKADESLDKLADE--VDESTKEAEKALEPFVERVKNLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQAAPEV------KYIFELNPAH----QLVKRA-ADTQD 585          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BACHD (Chaperone protein htpG OS=Bacillus halodurans GN=htpG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21
Identity = 68/219 (31.05%), Postives = 112/219 (51.14%), Query Frame = 2
Query:    2 SFSKNLNLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKL--VSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 649
            SF + L  G++ D   NK  L +LL ++S+    ++ +L +YV+RMKE Q  IYY TGES   +E  P  E +  KGYE+LY  + +DE+A+  L  ++ K+   VS+   G + DE +D     +  KE FE +    K +L                P CL T E   +  ME++++A     N     + ++K +EIN  + + + L+   ++DK+
Sbjct:  382 SFGRQLKYGVYSDFGANKEDLQDLLLFYSSTE-KKMVTLDEYVSRMKEDQPYIYYATGESYARIEKLPQTEMVADKGYEILYFTEDVDEFAIKMLASYKEKEFRSVSSGDLGFEDDEQKDTAADTDEQKELFEHM----KTILDGKVKDVRASKRLKSHPVCL-TAEGEVSIEMEKVLRAMPDNQN-----VQAEKVLEINVNHDVFDVLKASFESDKD 589          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BORGA (Chaperone protein htpG OS=Borrelia garinii GN=htpG PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.360e-21
Identity = 64/217 (29.49%), Postives = 110/217 (50.69%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            F + +  G++ D  N+ KL  L+R+ S+ S D   S K+Y  RMKE Q  IYYITG  +  ++ +P +   K+KG+E+L M D +DE  +  + E+EG KL +  K     +E +DE   K  ++E+F+ +   +K++L                P  ++      T  M++IM +       +      K  +E+NP N I++ L K  +++K +K
Sbjct:  375 FGRCIKEGVYSDFENREKLISLIRFKSS-SVDGFVSFKEYKERMKESQKSIYYITGGKENILKENPIVSAYKEKGFEILIMDDELDEAILNLIPEYEGLKLKAINKNETS-NELKDENFKK--IEEEFKDILTKVKEILKDHIKEVNLSATLIKEPSAIIVDSNDPTYQMQKIMLSMGQEVKEI------KPILELNPNNKIVQNL-KNLESEKLEK 580          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_RICBR (Chaperone protein htpG OS=Rickettsia bellii (strain RML369-C) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.437e-21
Identity = 64/211 (30.33%), Postives = 108/211 (51.18%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLK--EKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   L  G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT+  + +D+  S  E+K K+  K  ++++ L    K+VLG               P CL   E      MER +  Q    N      +S K +E+NP+N I+E++
Sbjct:  369 NFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIKGFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHTIKSATRSDIDVDQATSSSEEKNKDDKKSDDEYKSLTDYFKEVLGILVKDVKISKKLTSSPACLAVSEAAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKI 572          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_RICB8 (Chaperone protein htpG OS=Rickettsia bellii (strain OSU 85-389) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.437e-21
Identity = 64/211 (30.33%), Postives = 108/211 (51.18%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLK--EKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   L  G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT+  + +D+  S  E+K K+  K  ++++ L    K+VLG               P CL   E      MER +  Q    N      +S K +E+NP+N I+E++
Sbjct:  369 NFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIKGFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVDQATSSSEEKNKDDKKSDDEYKSLTDYFKEVLGILVKDVKISKKLTSSPACLAVSEAAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKI 572          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_ECOK12.556e-2133.79Chaperone protein htpG OS=Escherichia coli O1:K1 /... [more]
HTPG_ECOHS2.556e-2133.79Chaperone protein htpG OS=Escherichia coli O9:H4 (... [more]
HTPG_ECO572.556e-2133.79Chaperone protein htpG OS=Escherichia coli O157:H7... [more]
HTPG_ECO242.556e-2133.79Chaperone protein htpG OS=Escherichia coli O139:H2... [more]
HTPG_NATTJ3.338e-2129.95Chaperone protein htpG OS=Natranaerobius thermophi... [more]
HTPG_KLEP73.338e-2134.84Chaperone protein htpG OS=Klebsiella pneumoniae su... [more]
HTPG_BACHD3.338e-2131.05Chaperone protein htpG OS=Bacillus halodurans GN=h... [more]
HTPG_BORGA4.360e-2129.49Chaperone protein htpG OS=Borrelia garinii GN=htpG... [more]
HTPG_RICBR7.437e-2130.33Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_RICB87.437e-2130.33Chaperone protein htpG OS=Rickettsia bellii (strai... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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