FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BUCBP (Chaperone protein htpG OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=htpG PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.223e-16
Identity = 59/220 (26.82%), Postives = 102/220 (46.36%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            F   L  G  EDS N+T ++ L+R+ S  +  +    SL++YV  MK+ Q  IY+IT ++  +  +SP LE  KKK  +VL + D IDE+ +  L E+  KK  S +K+   +++   ++    ET +E         K  L                P  ++T     +  M ++  A      ++      K  +EINP + ++    K+ + +KN+K
Sbjct:  379 FGLILKEGPAEDSENRTSISNLIRFSSLLNNTQKPTMSLENYVKNMKQNQEKIYFITADNYASAVSSPHLEFFKKKNIDVLILSDKIDEWMMNYLIEYNEKKFQSVSKDDKSIEKLVHEQNSQNETYQENMNDFLNRAKKTLSDKIKDIRFTHKLTNTPAMVITDSNEMSTQMAKLFSAAGQTVPTI------KYILEINPNHLLI----KKINNEKNEK 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJR (Chaperone protein htpG OS=Campylobacter jejuni (strain RM1221) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.515e-16
Identity = 60/208 (28.85%), Postives = 98/208 (47.12%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F K L  G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K ++       +++ ED+ ++ +  K  F  L    K++L                P C+V  +      M++++K      N        K  +EINP++ I   L+
Sbjct:  373 TFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFIA-------INQVEDKNELSDEEKNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQN-------FKPILEINPKHAIFTGLK 564          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_RHIEC (Chaperone protein htpG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16
Identity = 60/209 (28.71%), Postives = 97/209 (46.41%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE--DEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   L  GI+ED   + +L  L R+H++ S +   SL +YV   KEGQ+ IYY+ G S   ++ SP LE  + +G EVL + D++D + V    EFEGK   S T+    L +    D +   E             ++ L                  CLV  E G+   ME+I++      N+     ++K  +EIN  +P+++ +
Sbjct:  377 NFGPVLKEGIYEDYERRAQLMALARFHTSASPEGHRSLAEYVKDAKEGQDAIYYLAGGSLDQLKASPQLEGFRARGIEVLLLTDSVDSFWVVNAPEFEGKAFKSITQGTADLAQFPRLDNQTPPEQDSAGLATFIGFAREKLAGQVADVRASDRLTESAVCLVAPEDGYDRQMEKILQ------NAGRLQGATKPILEINLAHPVIKAI 579          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ANAMM (Chaperone protein htpG OS=Anaplasma marginale (strain St. Maries) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.408e-16
Identity = 61/224 (27.23%), Postives = 105/224 (46.88%), Query Frame = 2
Query:    2 SFSKNLNLGIHE--DSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATK----------EGLKLDESEDEKKMKET----LKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   L  G+ E  D+ ++  +  + R++S+ S + EL SL DY++RMK GQ  I+Y++G   ++   SP +E +   G EV+ +VD +D++    + E++G    S T+          EG     ++ +K+ K+T     KE  E     +K VLG                 CL   E+     MER      LR+     Y  S + +E+N ++P++  L
Sbjct:  369 NFGPVLKEGLCEAMDTESRESILSVCRFYSSNSKEGELISLGDYISRMKPGQEHIFYLSGNDLESAMRSPQIEGMVSNGIEVVLLVDPVDDFWTSVVLEYKGVPFKSVTRVDESDLEKFTEGDDQQSTKKKKEKKDTDDAQQKENVEAFIDYMKKVLGDSVSDIKVSRKLTTSLVCLAVPEHALDIRMERF-----LREQKQLSYKGS-RILELNIKHPVLSGL 586          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_TREPA (Chaperone protein htpG OS=Treponema pallidum GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15
Identity = 60/218 (27.52%), Postives = 104/218 (47.71%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSG---DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEY---AVGQLKEFEGKKLVS-ATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            +++ L  G++ D  ++ +L EL+R+ +       D  TS  +YV+RMK  Q  IYYI G   + +  SP  E  + +G+EVL M D ID     +V + KE+E + +    ++E L+ +E  D    +E   + F+ L + +  +L                  C+V  E   T  MER+M+A      S       K  +EIN  + ++++L++  D
Sbjct:  390 YNRPLKEGLYSDYEHREQLLELVRFRTLSESVPEDGWTSFAEYVSRMKPDQKAIYYIAGNDDRVLRQSPHAESYRLQGFEVLVMSDDIDGIVMPSVSKYKEWELRAINRLGSEEELRPNEETDAAAQRE---QGFKPLLERLTHILSDSVKEVRLSKRLSDSVSCIVIDENDPTVQMERLMRATGQTHKS-----KIKPILEINASHTLVQKLKESTD 599          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_RHIME (Chaperone protein htpG OS=Rhizobium meliloti GN=htpG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15
Identity = 56/218 (25.69%), Postives = 96/218 (44.04%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL---DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F   +  GI+ED   + +L  L R+ +T   D+  +L DYV  MKEGQ+ IYY+TG++   ++ SP LE  + +G EVL +   +D + V    +F+GK   S T+    L    +++D                   ++ LG                 CLV  E G    ++++++     +       + K  +EINP + ++  L      DK
Sbjct:  376 NFGSVIKEGIYEDFERRGQLLALSRFRTTADDDKPRALSDYVKEMKEGQSAIYYLTGDNLAQLKASPQLEGFRARGIEVLLLTCPVDSFWVTTAPDFDGKPFKSITQGAADLAGIAKNDDAAAASPEAGAAVTDFVSFARETLGEAVSDVRTSDRLTESAVCLVAPEQGPDRQLQKMLQDAGRIEG------APKPVLEINPGHQLIAALATCPSEDK 587          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ANAPZ (Chaperone protein htpG OS=Anaplasma phagocytophilum (strain HZ) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15
Identity = 58/228 (25.44%), Postives = 104/228 (45.61%), Query Frame = 2
Query:    2 SFSKNLNLGIHE--DSTNKTKLAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLK------------LDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADA 640
            +F   L  G+ E  D+ ++  +  + ++H++  +  EL SL DY++RMK GQ  I+Y++G+  ++ + SP +EKL   G EV+ +VD +D++    + E++G    S  + G K             D++ ++     + KE      + +K VL                  CL   +      MER      LR+     Y    + +EIN ++PI + L K  +A
Sbjct:  369 NFGPVLKEGLCEAMDTESREGVLSVCKFHTSACAAGELVSLADYISRMKPGQESIFYLSGDDLESTKRSPQIEKLVSSGIEVILLVDPVDDFWTSVVSEYKGVPFKSVMRVGEKDLEKCIGASDDSGDKTSEDSGESASDKESIGSFIEYLKKVLDGVVSDVRVSKKLTTSLVCLAVPDNSMDIRMERF-----LREQKQLNY-KGNRILEINIDHPIAKSLLKEHEA 590          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_FUSNN (Chaperone protein htpG OS=Fusobacterium nucleatum subsp. nucleatum GN=htpG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.964e-15
Identity = 59/222 (26.58%), Postives = 111/222 (50.00%), Query Frame = 2
Query:    5 FSKNLNLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL----DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            F +++  G+ +    NK KL +LL + S+   D+ T+LK+YV RM + + +I Y+  ES  A +  P +EKLK++G EVL + D IDE+ +  ++++ GK+  S      K     ++ E+ KK+ +  KE  E   + +KD +                    +  + G +  ME+ + ++   +N M     ++K + INPE+ +   L+   + +  +K
Sbjct:  365 FGRSIKAGVQDMFGMNKEKLQDLLIFVSSHD-DKYTTLKEYVDRMGDNK-EILYVPAESVDAAKYLPKMEKLKEQGREVLILTDKIDEFTLMAMRDYSGKEFKSINSSDFKFSDDKEKEEEVKKIADENKELIEKAKEFLKDKVS-----EVELSNNIGNSASSLLAKGGLSLEMEKTL-SEMTNNNDMP---KAEKVLAINPEHVLFNRLKSSVNTEDFNK 575          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_ORITB (Chaperone protein htpG OS=Orientia tsutsugamushi (strain Boryong) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14
Identity = 57/228 (25.00%), Postives = 103/228 (45.18%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE-KKMKETLK-----------EKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 649
            +F   L  G+ E + +  KL ++  + S    D+  SL +Y+  +K  Q +IYYITG+  +A+++SP +E L  +  +VL + D +D++ V   +++    L S T   +++D  + +  K  +T             +  E L K  K+VLG               P CL   E       ER +  Q    +       S K +EINP + I++++ +    ++N
Sbjct:  368 NFGAVLKEGLCEGTADVDKLLKICLFRSALQ-DKFISLDEYIANLKSEQKNIYYITGDDLEALKSSPQIEGLLSRNIDVLLLTDDVDKFWVMVTRKYNDYVLKSVTSANIEIDNCDTKTAKSSDTNNDGKDDTSSSDDQNCEQLIKYFKEVLGDKVKSVEVSKKLTRSPVCLTVPEGSMDIRTERFLIEQKQLSS------HSSKILEINPNHTIIKKINENIKLNQN 588          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_METS4 (Chaperone protein htpG OS=Methylobacterium sp. (strain 4-46) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13
Identity = 57/216 (26.39%), Postives = 101/216 (46.76%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 649
            +F   L  GI ED+ ++  +A LLR+ ST + +  TS  DYV+RMK  Q  IY + G+   A+  S  +E  + +G EVL + D +D +   +L +F+GK + S T+    L     E +      +  E L K +K++L                   L     G    M+R+++       +  G+ +    +E+NP + ++  + +RA A ++
Sbjct:  366 AFGPVLKEGIWEDAEHRDDIAALLRFRST-AVEGWTSFADYVSRMKPNQEAIYILVGDDAAALARSAQIEGFRARGIEVLLLSDHVDAFWPERLDKFDGKPIRSITQSADDLSAFAPEGEAAGEAADLTELLPK-LKEILKDDVAEVRASQRLVESAVLLSASSGGPDLQMQRLLR------RAGRGFGAGLPVLELNPRHALVRRIAERARAGED 573          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_BUCBP4.223e-1626.82Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_CAMJR5.515e-1628.85Chaperone protein htpG OS=Campylobacter jejuni (st... [more]
HTPG_RHIEC7.203e-1628.71Chaperone protein htpG OS=Rhizobium etli (strain C... [more]
HTPG_ANAMM9.408e-1627.23Chaperone protein htpG OS=Anaplasma marginale (str... [more]
HTPG_TREPA2.096e-1527.52Chaperone protein htpG OS=Treponema pallidum GN=ht... [more]
HTPG_RHIME2.737e-1525.69Chaperone protein htpG OS=Rhizobium meliloti GN=ht... [more]
HTPG_ANAPZ2.737e-1525.44Chaperone protein htpG OS=Anaplasma phagocytophilu... [more]
HTPG_FUSNN7.964e-1526.58Chaperone protein htpG OS=Fusobacterium nucleatum ... [more]
HTPG_ORITB2.317e-1425.00Chaperone protein htpG OS=Orientia tsutsugamushi (... [more]
HTPG_METS41.502e-1326.39Chaperone protein htpG OS=Methylobacterium sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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