FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39
Identity = 89/210 (42.38%), Postives = 130/210 (61.90%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGK-KLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKR 631
            F  ++ LG  ED  NK +L + L + S+K  +ELT+   YV RMKEGQ+ IY+ITG+SK +VE SP +E+  KKGYEVL++VD IDEY V QL +F+ K K  +  + G+K +E ++E+  ++   E+F+ L   +K  L                P  LV+  +G TAN ERIMKAQA + N+   + +SKK MEINP +P++++L  R
Sbjct:  470 FGSSMKLGAIEDQANKKRLTKYLLFPSSK--EELTTFAGYVERMKEGQDQIYFITGKSKDSVEASPLIEQAIKKGYEVLFLVDPIDEYLVPQLDKFDDKYKFTNLARSGVKFNEDKEEEDQRKQTAEEFKPLLSYLKKTLSDKLEKVVISKVLADSPSILVSNSWGVTANQERIMKAQAHQANAQPQF-NSKKIMEINPSHPLIKKLLNR 676          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.033e-38
Identity = 87/220 (39.55%), Postives = 129/220 (58.64%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKK---MKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            F   L  G+H D  NK KL EL+ + S+K+      SLK+YV RM E Q +IYYITG S+ A+ENSP LE  +KKG+EVLYM D +DE+ V  L +++GKKL +  +  L+LD +E++K+    +E  K++++G+   +K+ L                 CCLV  EYG  ANME+I+KA             SK+ +E+NP++P+M+ L    + DK +
Sbjct:  390 FGPVLKEGVHFDHANKEKLQELILFESSKTEAGNYISLKEYVARMPEAQKEIYYITGASRSALENSPHLEIFRKKGFEVLYMTDPVDEWVVQSLTDYDGKKLHAVDRGDLELDSAEEKKEKEAKQEEAKKQYQGVLDFVKEQLKDKVKEVRFSSRLTDSACCLVADEYGLNANMEKILKAM------NQDVPESKRVLELNPDHPLMQVLSSIFEKDKEN 603          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38
Identity = 90/214 (42.06%), Postives = 128/214 (59.81%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            +F   L  G+  ++  K KL  LLRY S++  + LTSL DYV RMKEGQ  IYY+ GES+KAV +SP LE LK++G+EVLYM D +DE+A   L+EF+GK LVSA +  LKL  ++++KK +E   E  + L   +KDVL                P CLV  E G  A +ER+++ +       AG    K+ +E+NP++P++E L+   D D
Sbjct:  385 AFGTVLKEGLATEAEQKDKLGGLLRYESSRE-EGLTSLADYVGRMKEGQEAIYYVYGESRKAVADSPHLEALKQRGFEVLYMTDPVDEWAAQGLREFQGKPLVSALQADLKLQSTDEQKKEQEQHAEGLKTLTSKMKDVLQESVREVRVSDRLTDSPVCLVVPEGGSPAYLERLLQQR----GRGAGMPRVKRILEVNPKHPVIEHLKAVHDRD 593          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: H90B4_HUMAN (Putative heat shock protein HSP 90-beta 4 OS=Homo sapiens GN=HSP90AB4P PE=5 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38
Identity = 84/164 (51.22%), Postives = 107/164 (65.24%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEY 496
            FSK   LGIHEDS N   L+ELL  H+ +SGDE+TSL +YV+ MKE Q  I  I GE K+ V NS F+E+  KKG+EV+YM + IDEY V QLKEF+GK L+S TKEGL+L E E+EKK+ E    KFE LC+++K++L                PC +VT  Y
Sbjct:  341 FSKISWLGIHEDSINWRHLSELLWSHTFQSGDEMTSLSEYVSCMKEAQKSICDIIGECKEQVANSAFVEQEWKKGFEVIYMSEPIDEYCVQQLKEFDGKSLLSVTKEGLELPEDEEEKKIMEESNVKFENLCRLMKEILDKKVERVTISSRLVSSPCRIVTSTY 504          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BDEBA (Chaperone protein htpG OS=Bdellovibrio bacteriovorus GN=htpG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37
Identity = 92/212 (43.40%), Postives = 125/212 (58.96%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK 628
            F   L  G+  D+ NK KL +LL +HST S D++T++ +YV RMKE Q DIYYITG+S   V NSP+LEKLK+KG+EVL +VD +DE+ V  L EF+GKKL S  +EGL LD +E EK+ KE  K++ E   K +    K  L                P CLV      +A+M+++M   A      AG    K+ MEINP +P+ E++ K
Sbjct:  372 FGATLKEGLPSDAANKEKLQDLLLFHSTSS-DKMTTMDEYVARMKETQKDIYYITGDSLSQVSNSPYLEKLKEKGFEVLLLVDPVDEWVVDALSEFKGKKLQSIMREGLDLDTAE-EKQQKEQEKKQAEVTLKPVLESMKKTLESDVKDVVLSDRLTNTPACLVASSADPSAHMQKLM---AQMGKEYAG-QQVKRIMEINPNHPVFEKMLK 577          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_AZOSE (Chaperone protein htpG OS=Azoarcus sp. (strain EbN1) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 89/211 (42.18%), Postives = 122/211 (57.82%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLK--EKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            F   L  G+ ED  NK K+A LLR+ ST +   DE+ SL DY+ RMKEGQ+ IYY+T ES  A +NSP LE  +KKG EVL + D +DE+ +G L EF+GK LVS  K GL L + EDE + KET K  ++++ L + +K  LG               P CLV  E+    N+ RI+KA   +        +SK  +EINP++P +  L+
Sbjct:  395 FGPVLKEGVGEDFANKDKIAGLLRFASTHADTPDEVVSLADYLARMKEGQDKIYYVTAESFNAAKNSPHLEIFRKKGIEVLLLTDRVDEWVIGNLPEFDGKALVSVAKGGLDLGKLEDEAEKKETEKAADEYKELLEKMKASLGERVKEVRVTHRLTDSPACLVADEHDVGMNLARILKAAGQQ------APASKPILEINPQHPAVMRLK 599          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_THIDA (Chaperone protein htpG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=htpG PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.381e-35
Identity = 91/218 (41.74%), Postives = 123/218 (56.42%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F K +  G  ED  NK K+A LLR+ ST +  +  + SLKDYV RMKEGQ  IYYIT +S  A ++SP LE  +KKG EVL + D +DE+  G L EF+GK L S  K GL L E ED  EK  ++  +E  + L + IK +LG               P CLVTGE   +AN+ER++KA      ++      K T+EINP + ++  L   +D D+
Sbjct:  383 FGKVMKEGPGEDFANKEKIAGLLRFASTHTDTDAQVVSLKDYVGRMKEGQTAIYYITADSFAAAQHSPHLEIFRKKGIEVLLLSDRVDEWLTGNLHEFDGKPLKSVAKGGLDLGELEDEAEKTAQKEAEESMKPLVERIKAMLGERVKDVRVTHRLTDSPACLVTGEGDMSANLERLLKAAGQAAPTV------KPTLEINPSHALVTRLDSESDEDR 594          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHEHH (Chaperone protein htpG OS=Shewanella halifaxensis (strain HAW-EB4) GN=htpG PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 90/218 (41.28%), Postives = 122/218 (55.96%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELT--SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F + L  G  ED  NK ++A LLR+ ST +G+     SL DYV RMKEGQ+ IY+I  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GKKL S T+  L+L E ED  EK+ +E L+ + EGL K +KD LG               P C+V GE   +  M ++M+A             SK T E+NPE+P++  L    D  +
Sbjct:  389 FGQVLKEGPAEDFANKERVAGLLRFASTHTGEATANVSLADYVERMKEGQSKIYFIVADSYEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEFDGKKLHSVTRGDLELGELEDASEKEAQEKLETESEGLVKRVKDSLGDKVSAVKVTTRLTDTPACVVAGEGEMSTQMIKLMQAAG------QDVPESKPTFELNPEHPLVARLNDEQDEQR 600          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_FRATW (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.049e-35
Identity = 84/218 (38.53%), Postives = 127/218 (58.26%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            SF + L  G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+       S    M  K  +E+N E+ ++++L+  AD +
Sbjct:  378 SFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG---QSFMPGMGMKPILELNAEHNLVQKLKNEADTE 592          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_FRATT (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis GN=htpG PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.049e-35
Identity = 84/218 (38.53%), Postives = 127/218 (58.26%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            SF + L  G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+       S    M  K  +E+N E+ ++++L+  AD +
Sbjct:  378 SFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDRFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG---QSFMPGMGMKPILELNAEHNLVQKLKNEADTE 592          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
ENPL_DICDI6.056e-3942.38Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HTPG_GEOUR1.033e-3839.55Chaperone protein htpG OS=Geobacter uraniireducens... [more]
HTPG_MYXXD8.744e-3842.06Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
H90B4_HUMAN8.744e-3851.22Putative heat shock protein HSP 90-beta 4 OS=Homo ... [more]
HTPG_BDEBA7.402e-3743.40Chaperone protein htpG OS=Bdellovibrio bacteriovor... [more]
HTPG_AZOSE8.184e-3642.18Chaperone protein htpG OS=Azoarcus sp. (strain EbN... [more]
HTPG_THIDA2.381e-3541.74Chaperone protein htpG OS=Thiobacillus denitrifica... [more]
HTPG_SHEHH4.062e-3541.28Chaperone protein htpG OS=Shewanella halifaxensis ... [more]
HTPG_FRATW9.049e-3538.53Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATT9.049e-3538.53Chaperone protein htpG OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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