FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_FRAT1 (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.049e-35
Identity = 84/218 (38.53%), Postives = 127/218 (58.26%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            SF + L  G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+       S    M  K  +E+N E+ ++++L+  AD +
Sbjct:  378 SFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDRFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG---QSFMPGMGMKPILELNAEHNLVQKLKNEADTE 592          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHELP (Chaperone protein htpG OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.182e-34
Identity = 88/217 (40.55%), Postives = 122/217 (56.22%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + L  G  ED  NK K+A LLR+ ST + +     SL DYV RMKEGQ+ IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GK+L S T+  L+L E ED  EK+ +E L+ + EGL K +K+VLG               P C+V G    ++ M ++M+A             SK   E+NPE+P+++ L    D +
Sbjct:  389 FGQVLKEGPAEDFANKEKIAGLLRFASTHTNEAAHTVSLSDYVERMKEGQSKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLSEFDGKQLHSVTRGDLELGELEDAAEKEAQEKLETESEGLVKRVKEVLGDKVAEVKVTSRLTDTPACVVAGAGEMSSQMIKLMQAAG------QAVTESKPVFELNPEHPLVKRLDTEQDEE 599          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHEDO (Chaperone protein htpG OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=htpG PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.182e-34
Identity = 88/215 (40.93%), Postives = 121/215 (56.28%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELT--SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED  NK ++A LLR+ ST  G   T  SL+DY++RMKEGQ+ IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GKKL S T+  L+L E ED  +K+ K+ + E+ +GL + +K  LG               P C+V GE   +  M ++M+A             SK T EINP +P++  L   AD
Sbjct:  387 FGQVLKEGPAEDFANKERIAGLLRFASTHEGSAATTVSLEDYISRMKEGQDKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEFKGKKLHSVTRGDLELGELEDAADKEAKDKITEEAKGLVERMKAALGAKVSEVKVTTRLTDTPACVVAGEGEMSTQMIKLMQAAG------QAVPESKPTFEINPNHPLVARLNDEAD 595          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_FRATN (Chaperone protein htpG OS=Francisella tularensis subsp. novicida (strain U112) GN=htpG PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.182e-34
Identity = 85/218 (38.99%), Postives = 128/218 (58.72%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            SF + L  G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+        M G M  K  +E+N E+ ++++L+  AD +
Sbjct:  378 SFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDKFETPENKEKFEKETKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG--QGFMPG-MGMKPILELNAEHNLVQKLKNEADTE 592          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_FRAP2 (Chaperone protein htpG OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=htpG PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.182e-34
Identity = 86/218 (39.45%), Postives = 128/218 (58.72%), Query Frame = 2
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            SF + L  G+ +D +NK K+A LLR+ +T+SGD  +  SL DYV+RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+        M G M  K  +E+N E+ ++++L+  AD +
Sbjct:  378 SFGQVLKEGVSDDYSNKEKIAGLLRFATTESGDAKQTVSLADYVSRMKEGQDTIYYITSDSYKAAVNNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG--QGFMPG-MGMKPILELNAEHNLVQKLKNEADTE 592          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPA (Chaperone protein htpG OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=htpG PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34
Identity = 88/215 (40.93%), Postives = 120/215 (55.81%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE--DEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED  NK ++A LLR+ ST +G+     SL DY+ RM+EGQ+ IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GKKL S T+  L+L E E  DEK+ +E L+ + EGL K +KD LG               P C+V GE   +  M ++M+A              K T E+NPE+P++  L    D
Sbjct:  388 FGQVLKEGPAEDFANKERIAGLLRFASTHTGEATPNVSLADYIERMQEGQSKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEFDGKKLHSVTRGDLELGELEDDDEKEAQEKLQTESEGLVKRVKDSLGDKVSEVKVTTRLTDTPACVVAGEGEMSTQMIKLMQAAG------QDVPEPKPTFELNPEHPLVARLNDEQD 596          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_BORA1 (Chaperone protein htpG OS=Bordetella avium (strain 197N) GN=htpG PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34
Identity = 83/217 (38.25%), Postives = 127/217 (58.53%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + L  G+ ED +N+ ++A+LLR+ ST +GD  + TSL+DY+ R+KEGQ+ IYY+T +S  A  NSP LE  +KKG EVL + D +DE+ +  L+EFEGK LVS  K GL L +   E+EKK +  + E F+ L + ++  LG               P C+V G+   + ++ R++KA       +      K  +EINPE+ ++  +R  +DAD
Sbjct:  383 FGQVLKEGVGEDPSNQERIAKLLRFASTHAGDASQTTSLQDYLGRLKEGQDKIYYVTADSYSAASNSPHLEIFRKKGIEVLLLWDRVDEWMLSHLREFEGKSLVSVAKGGLDLADLADEEEKKKQTEVAESFKPLIERLQTALGEQVKEVRVTLRLVDSPACVVVGQNDLSPHLLRMLKAAGQEVPEV------KPVLEINPEHALIARIRDVSDAD 593          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HSP90_PLAFP (Heat shock 90 kDa protein homolog (Fragment) OS=Plasmodium falciparum (isolate Palo Alto / Uganda) PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34
Identity = 74/124 (59.68%), Postives = 88/124 (70.97%), Query Frame = 2
Query:  284 KEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            K+F+GKKL   TKEGL +  SE+ KK  ETLK ++EGLCKVIKDVL                PC LVT E+GW+ANMERIMKAQALRDNSM  YM SKK MEIN  +PI+  L+++ADADK+DK
Sbjct:    1 KDFDGKKLKCCTKEGLDIHHSEEAKKDFETLKAEYEGLCKVIKDVLHKKVEKVVVGQRITDSPCVLVTSEFGWSANMERIMKAQALRDNSMTSYMLSKKIMEINARHPIISALKQKADADKSDK 124          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_CHRVO (Chaperone protein htpG OS=Chromobacterium violaceum GN=htpG PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.016e-34
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE--KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G+ ED  NK ++A+LLR+ ST S D     SL DY+ RMKEGQ+ IYYIT ++  A +NSP LE  KKKG EVL + D +DE+  G L EF+GK L S  K  L L   EDE  K+ ++ ++E  + + + ++  LG               P CLV GE+  +A++ER++KA   +         SK T+EINPE+ +++ L + +D
Sbjct:  381 FGQVLKEGVGEDFANKERIAKLLRFVSTASEDAEPTVSLADYIGRMKEGQDKIYYITADTLAAAKNSPHLEVFKKKGVEVLLLTDRVDEWVTGSLFEFDGKALQSVAKGALDLGALEDEADKEAQKQVEEASKPVVEKVQKALGDKVKEVRATARLVESPACLVAGEHDMSAHLERMLKAAGQK------IEGSKPTLEINPEHVLVKRLAEESD 589          
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HTPG_SHESH (Chaperone protein htpG OS=Shewanella sediminis (strain HAW-EB3) GN=htpG PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.491e-34
Identity = 88/215 (40.93%), Postives = 121/215 (56.28%), Query Frame = 2
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + L  G  ED  NK ++A LLR+ ST + D     SL DYV+RM+EGQ+ IYYI  +S +A  NSP LE L+KKG EV+ M + IDE+ +  L +F+GK+L S T+  L+L + ED  EK+ +E L+ + EGL K IKD LG               P C+V GE   +  M ++M+A             SK T EINPE+P++  L    D
Sbjct:  388 FGQVLKEGPAEDMVNKERIAGLLRFASTHTEDAAPTVSLADYVSRMQEGQSKIYYIVADSHEAAANSPHLELLRKKGIEVVLMSERIDEWLINHLTDFDGKQLHSVTRGDLELGDLEDAGEKEAQEKLETESEGLVKRIKDSLGEKVSAVKVTTRLTDTPACVVAGEGEMSTQMIKLMEAAG------QAVPESKPTFEINPEHPLVARLNDEQD 596          
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_FRAT19.049e-3538.53Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_SHELP1.182e-3440.55Chaperone protein htpG OS=Shewanella loihica (stra... [more]
HTPG_SHEDO1.182e-3440.93Chaperone protein htpG OS=Shewanella denitrificans... [more]
HTPG_FRATN1.182e-3438.99Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRAP21.182e-3439.45Chaperone protein htpG OS=Francisella philomiragia... [more]
HTPG_SHEPA1.543e-3440.93Chaperone protein htpG OS=Shewanella pealeana (str... [more]
HTPG_BORA11.543e-3438.25Chaperone protein htpG OS=Bordetella avium (strain... [more]
HSP90_PLAFP1.543e-3459.68Heat shock 90 kDa protein homolog (Fragment) OS=Pl... [more]
HTPG_CHRVO2.016e-3439.53Chaperone protein htpG OS=Chromobacterium violaceu... [more]
HTPG_SHESH4.491e-3440.93Chaperone protein htpG OS=Shewanella sediminis (st... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
back to top