FC931090

Overview
NameFC931090
Unique NameFC931090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length757
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15271 contig Ccv1_Contig15271:1..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931090 vs. ExPASy Swiss-Prot
Match: THIKA_CANTR (3-ketoacyl-CoA thiolase A, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21
Identity = 59/124 (47.58%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  318 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL--APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 683
            DDVVIVAAYRTAI K  +G F+   ++ +L   LK  I+KT ++PS + D+ +G VL  A G+T   E R A   AG P T     VNR CSSGL A++D+A  IK G  + G+A G ESM+ N
Sbjct:   25 DDVVIVAAYRTAIGKGFKGSFRSVRSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGAT---EHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTN 145          
BLAST of FC931090 vs. ExPASy Swiss-Prot
Match: THIK_YEAST (3-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomyces cerevisiae GN=FOX3 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 58/126 (46.03%), Postives = 73/126 (57.94%), Query Frame = 3
Query:  318 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVI----EKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 683
            +DVVIVAA R+AI K  +G FKD   D LL   L   I    E  R + + + ++  G VL  G+  A E R A   +G P + P   +NRQCSSGL AV D+A  IK G  DIG+A G+ESMT N
Sbjct:   34 EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAG-ATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNN 158          
BLAST of FC931090 vs. ExPASy Swiss-Prot
Match: THLA_STAAB (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0304 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.383e-17
Identity = 52/124 (41.94%), Postives = 78/124 (62.90%), Query Frame = 3
Query:  324 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV 695
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP+ TVN+ C SGL+++     +I  G  DI +A G+E+M+ + + V
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEINEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPVFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLV 125          
BLAST of FC931090 vs. ExPASy Swiss-Prot
Match: THLA_STAAR (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0351 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  324 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV 695
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP  TVN+ C SGL+++     +I  G  DI +A G+E+M+ + + V
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEINEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLV 125          
BLAST of FC931090 vs. ExPASy Swiss-Prot
Match: THLA_STAAW (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MW2) GN=MW0330 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.082e-17
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  324 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV 695
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP  TVN+ C SGL+++     +I  G  DI +A G+E+M+ + + V
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLV 125          
BLAST of FC931090 vs. ExPASy Swiss-Prot
Match: THLA_STAAS (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0330 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.082e-17
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  324 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV 695
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP  TVN+ C SGL+++     +I  G  DI +A G+E+M+ + + V
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLV 125          
BLAST of FC931090 vs. ExPASy Swiss-Prot
Match: THLA_STAAN (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain N315) GN=SA0342 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.082e-17
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  324 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV 695
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP  TVN+ C SGL+++     +I  G  DI +A G+E+M+ + + V
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLV 125          
BLAST of FC931090 vs. ExPASy Swiss-Prot
Match: THLA_STAAM (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0354 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.082e-17
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  324 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV 695
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP  TVN+ C SGL+++     +I  G  DI +A G+E+M+ + + V
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLV 125          
BLAST of FC931090 vs. ExPASy Swiss-Prot
Match: THLA_STAAC (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain COL) GN=SACOL0426 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.082e-17
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  324 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV 695
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP  TVN+ C SGL+++     +I  G  DI +A G+E+M+ + + V
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLV 125          
BLAST of FC931090 vs. ExPASy Swiss-Prot
Match: THLA_STAA8 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00336 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.082e-17
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  324 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV 695
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP  TVN+ C SGL+++     +I  G  DI +A G+E+M+ + + V
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLV 125          
The following BLAST results are available for this feature:
BLAST of FC931090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
THIKA_CANTR1.209e-2147.583-ketoacyl-CoA thiolase A, peroxisomal OS=Candida ... [more]
THIK_YEAST8.110e-1846.033-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomy... [more]
THLA_STAAB1.383e-1741.94Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAR2.360e-1741.94Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAW3.082e-1741.94Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAS3.082e-1741.94Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAN3.082e-1741.94Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAM3.082e-1741.94Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAC3.082e-1741.94Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA83.082e-1741.94Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionC34101C11EF PostHarvP1 Citrus clementina cDNA clone C34101C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931090 ID=FC931090; Name=FC931090; organism=Citrus clementina; type=EST; length=757bp
GAGTGTCCTATAATTTCCCAAGTATATTTCAGGGGGCCAAAAAAAAAAAA
AAAAAAAAAAACAGGTACTATAACTTCNGGAGTAGATTCAAACCAGGAAA
GAGTAAACAAGTCATCCCTGGTTCTCGATTCATCAGAACTCAAAAGCTTT
CCATTGAAACCTGAGAGTGAGAGATGGAGAAAGCTCTTCACAGACAGAGA
ATTCTGCTTCAACATCTTCAACCTTCTTCTTCCCAAACCAGTGACTCGCC
GGCTATTTCTGCTTCGATTTGTTCGGCTGGTGAAGCTGCAGGATACCATA
GGAAGCCTGCTTTCGATGATGATGTCGTAATTGTGGCTGCATACCGTACT
GCAATTTGCAAGGCGAAACGTGGAGGCTTCAAGGATACTCTTGCCGATGA
TCTGCTTGCACCTGTTCTAAAGGCAGTGATAGAGAAAACGAGGTTGAATC
CCAGTGAAGTAGGGGATATAGTTGTTGGTACAGTCTTGGCACCTGGCTCA
ACAAGAGCCATGGAGTGTAGGATGGCAGCGTTCTATGCTGGTTTCCCTGA
AACGGTGCCCCTCAGAACTGTCAACAGGCAGTGTTCATCTGGCTTGCAGG
CGGTTGCTGATGTTGCAACAGCTATAAAAGCTGGATTGTATGACATTGGT
ATTGCTGCTGGATTGGAAAGCATGACTGTGAATTCTATTAGCGTTGTTGG
CCAGTTAACCCCCAAGTGGAGATCTTTACTCAAGCTCGGGACTGTCTGCT
TCCTATG
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