FC931099
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931099 vs. ExPASy Swiss-Prot
Match: RS6_CHICK (40S ribosomal protein S6 OS=Gallus gallus GN=RPS6 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.933e-60 Identity = 124/202 (61.39%), Postives = 146/202 (72.28%), Query Frame = 1 Query: 82 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKQR 687 MK NI+ P TGCQK +E+DD++ +R F++KR++ EV D+LGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIVKKGE D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RIA KKQR Sbjct: 1 MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQR 198
BLAST of FC931099 vs. ExPASy Swiss-Prot
Match: RS6_ONCMY (40S ribosomal protein S6 OS=Oncorhynchus mykiss GN=rps6 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.636e-59 Identity = 122/202 (60.40%), Postives = 146/202 (72.28%), Query Frame = 1 Query: 82 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKQR 687 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV D LG+E+KGY+ +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CI +LSVLNLVI+KKGE D+PGLTD+ PR GPKRASKIRKLFNL+KEDDVR+YV RR T + K +KAP+IQRLVTP LQ KR RIA KKQR Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQGFPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGEKDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV--VRRPLTKEGKKPRTKAPRIQRLVTPRVLQHKRRRIALKKQR 198
BLAST of FC931099 vs. ExPASy Swiss-Prot
Match: RS6_XENLA (40S ribosomal protein S6 OS=Xenopus laevis GN=rps6 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.137e-59 Identity = 122/202 (60.40%), Postives = 145/202 (71.78%), Query Frame = 1 Query: 82 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKQR 687 MK NI+ P TGCQK +E++D++KLR F++KR++ EV D LG+E+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIV+KGE D+PGLTD PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RIA KKQR Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGEKDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLAKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQR 198
BLAST of FC931099 vs. ExPASy Swiss-Prot
Match: RS6_GLOMM (40S ribosomal protein S6 OS=Glossina morsitans morsitans GN=RpS6 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.875e-58 Identity = 120/203 (59.11%), Postives = 142/203 (69.95%), Query Frame = 1 Query: 82 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLVTPLTLQRKRGRIAEKKQR 687 MK N++ P TGCQK E++D+ KLR F++K + Q V D LG+E+KGY+ +I GG DKQGFPMKQGVLT RVRLLL +G C+ CIV ++SVL LVIVKKGE D+PGLTDT PR GPKRASKIRKL+NLSK DDVR YV RR K KK +SKAPKIQRL+TP+ LQRKR RIA KK+R Sbjct: 1 MKLNVSYPATGCQKLFEVNDEHKLRVFYEKHMGQVVEADILGDEWKGYMLRISGGNDKQGFPMKQGVLTHDRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVIVKKGEKDIPGLTDTSVPRRLGPKRASKIRKLYNLSKVDDVRPYV--IRRPLPAKDNKKAISKAPKIQRLITPVVLQRKRRRIALKKKR 199
BLAST of FC931099 vs. ExPASy Swiss-Prot
Match: RS6_DROME (40S ribosomal protein S6 OS=Drosophila melanogaster GN=RpS6 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.532e-57 Identity = 119/203 (58.62%), Postives = 142/203 (69.95%), Query Frame = 1 Query: 82 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLVTPLTLQRKRGRIAEKKQR 687 MK N++ P TGCQK E+ D+ KLR F++KR+ Q V D LG+E+KGY +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV ++SVL LV++KKGE D+PGLTDT PR GPKRASKIRKL+NLSKEDDVR++V RR K KK SKAPKIQRL+TP+ LQRK RIA KK+R Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKR 199
BLAST of FC931099 vs. ExPASy Swiss-Prot
Match: RS6_BRAFL (40S ribosomal protein S6 OS=Branchiostoma floridae GN=RPS6 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.532e-57 Identity = 118/203 (58.13%), Postives = 145/203 (71.43%), Query Frame = 1 Query: 82 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVS-KAPKIQRLVTPLTLQRKRGRIAEKKQR 687 MK NI+ P TGCQK +E+DD++KLR F++KR+S ++ ++LG+E+KGY+ +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVI+KKGE D+PGLTDT PR GPKRA +IRKLFNL+KEDDVR+YV RR K GKK K PKIQRL+TP LQRKR A K++R Sbjct: 1 MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQGFPMKQGVLTNGRVRLLLGKGHSCY--RPRRTGERKRKSVRGCIVDSNLSVLNLVILKKGEQDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV--VRRPLPQKEGKKQKFKTPKIQRLITPQRLQRKRHMRAVKRRR 199
BLAST of FC931099 vs. ExPASy Swiss-Prot
Match: RS6_AEDAE (40S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 PE=2 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.532e-57 Identity = 118/204 (57.84%), Postives = 143/204 (70.10%), Query Frame = 1 Query: 82 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPKIQRLVTPLTLQRKRGRIAEKKQRI 690 MK N++ P TG QK E+ DD KLR F+DKR+ E+ D LG+E+KGYVFKI GG DKQGFPMKQGVLT RVRLLL +G C+ CIV +LS L L++VKKGE D+PGLTDT PR GPKRAS IRKL+NL+KEDDVR++V +R K GKK +KAPKIQRL+TP+ LQRKR R+A KK+R+ Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRPLPEKDGKKARTKAPKIQRLITPVVLQRKRHRLAIKKRRV 200
BLAST of FC931099 vs. ExPASy Swiss-Prot
Match: RS6_SPOFR (40S ribosomal protein S6 OS=Spodoptera frugiperda GN=RpS6 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.297e-56 Identity = 118/207 (57.00%), Postives = 144/207 (69.57%), Query Frame = 1 Query: 82 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVS----KAPKIQRLVTPLTLQRKRGRIAEKKQRI 690 MK N++ P TGCQK E+ D+ KLR F++KR+ EV D LG+E+KGYV +I GG DKQGFPMKQGVLT RVRLL+ +G C+ CIV +LSVL LVIV+KGE ++PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV +R K GK+ + KAPKIQRLVTP+ LQR+R R+A KK+R+ Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRL 203
BLAST of FC931099 vs. ExPASy Swiss-Prot
Match: RS6_AEDAL (40S ribosomal protein S6 OS=Aedes albopictus GN=RpS6 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.297e-56 Identity = 118/204 (57.84%), Postives = 142/204 (69.61%), Query Frame = 1 Query: 82 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPKIQRLVTPLTLQRKRGRIAEKKQRI 690 MK N++ P TG QK E+ DD KLR F+DKR+ E+ D LG+E+KGYVFKI GG DKQGFPMKQGVLT RVRLLL +G C+ CIV +LS L L++VKKGE D+PGLTDT R GPKRAS IRKL+NL+KEDDVR+YV +R K GKK +KAPKIQRL+TP+ LQRKR R+A KK+R+ Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VKRPLPEKDGKKPRTKAPKIQRLITPVVLQRKRHRLAIKKRRV 200
BLAST of FC931099 vs. ExPASy Swiss-Prot
Match: RS6B_SCHPO (40S ribosomal protein S6-B OS=Schizosaccharomyces pombe GN=rps6b PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 4.927e-56 Identity = 119/203 (58.62%), Postives = 139/203 (68.47%), Query Frame = 1 Query: 82 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLVTPLTLQRKRGRIAEKKQR 687 MK NI+ P G QK +EIDDD++LR F +KR+ QEV GD++G EF GYVFKI GG DKQGFPM QGVL P RVRLLL G PC+ CIV DL+VL L IVK+GE D+PGLTD P+ GPKRASKIR+ FNLSKEDDVR++V R K GKK +KAPKIQRLVTP TLQ KR R A K+++ Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQGFPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIVKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQ 200 The following BLAST results are available for this feature:
BLAST of FC931099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931099 ID=FC931099; Name=FC931099; organism=Citrus clementina; type=EST; length=691bpback to top |