FC931100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931100 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.912e-26 Identity = 66/169 (39.05%), Postives = 104/169 (61.54%), Query Frame = 2 Query: 71 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 574 L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ +M + +ERY+ A +A + +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L AN+ L+++++E Sbjct: 8 LRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK----SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172
BLAST of FC931100 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.497e-26 Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = 2 Query: 71 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 574 +K+I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ GKL+++ SSSSM + LER + + + + E L+L Y +L R + GEEL LN +EL+ LER L+ L ++ + ++ + +LQ K L E N+ L+Q++ME Sbjct: 8 IKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDY-SSSSMKQILERRDLHSKNLEKLDQPSLE-LQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVME 173
BLAST of FC931100 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.488e-26 Identity = 71/168 (42.26%), Postives = 103/168 (61.31%), Query Frame = 2 Query: 71 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-SSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLM 571 +KRIENK +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS++GKL+E+CS SM + + RY + GA P R L E K++ LQ S + G++L +EL LE+QL+ +L +IR+ + + M + L+ E++L + N + Q LM Sbjct: 11 VKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTT-GASLPVEDNRVQL----YDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLM 173
BLAST of FC931100 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.049e-24 Identity = 66/175 (37.71%), Postives = 101/175 (57.71%), Query Frame = 2 Query: 71 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQ----EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGY 580 +KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+CS + L+ L E YQ V+ E++ Q E +++ E L R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KE +L + N L + + E + Sbjct: 8 IKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ---------TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENH 173
BLAST of FC931100 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.337e-24 Identity = 64/169 (37.87%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 71 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMLKTLERYQKCNYGAPE-PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLM 571 +KRIEN +RQVTF+KRR+GL+KK +ELSVLCDA++ LI+FS +GKL E+C+ SM + ++RY K PE N + A +E ++K LQ + + G++L + +EL LE+ LD SL ++R+ + + + + + L+ E +L + N+ + LM Sbjct: 8 VKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEMYHWLM 176
BLAST of FC931100 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.052e-24 Identity = 67/169 (39.64%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 71 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELS-SQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 574 +KRIE+ RQVTF+KRR GL KKA ELSVLCDA+VALI+FS+ GKL F +SSSM + +++Y N + + + +L+L+ +Y L + R + GEEL L+ EL+ LE+ L+ L ++ T+ Q ++ ++ELQ K L+E N L+ ++ + Sbjct: 8 IKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHF-ASSSMNEIIDKY---NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQ 172
BLAST of FC931100 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.160e-23 Identity = 65/182 (35.71%), Postives = 101/182 (55.49%), Query Frame = 2 Query: 71 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAE 616 ++RI+N RQVTF+KRR GL KKA ELS+LCDAEV L++FS GKL++F +S+SM + ++RY + S + L+ +LK R + GEEL LN ++L+ LE+ L+ L + T+++ +LD + L+ K L E N LK++L ++ P + Sbjct: 27 IRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQF-ASTSMEQIIDRYNSHSKTLQRAEPSQLD-LQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEEMQPGPD 206
BLAST of FC931100 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.978e-23 Identity = 68/171 (39.77%), Postives = 102/171 (59.65%), Query Frame = 2 Query: 71 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSML-KTLERYQKCN----YGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 568 +KRIEN NRQVT++KRRNG++KKA E++VLCDA+V+LIIF N GK++E+CS S+ L L+ YQK + + A N+S E ++K + +Q R+L GE++ LN KEL LE L L I + ++ + L ++ +Q+L E +K L+ L Sbjct: 8 IKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLS----------NEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQS----EILRMVRKNDQILEEEHKQLQYAL 164
BLAST of FC931100 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23 Identity = 65/167 (38.92%), Postives = 101/167 (60.48%), Query Frame = 2 Query: 71 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQ-QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 568 +KRIENK +RQVTF+KRRNGL++KA +LS+LC++ +A+++ S GKLY+ S +M K ++RY+ + EAL+L+ + + YL LK E L+ Q L + + L SLE QL+ +L R+ +T+ M+ + LQ E LL E N+TL ++ Sbjct: 8 IKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYE-------IHHADELEALDLAEKTRNYLPLK---ELLEIVQSKLEESNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTLASQV 164
BLAST of FC931100 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23 Identity = 71/195 (36.41%), Postives = 107/195 (54.87%), Query Frame = 2 Query: 71 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLKTLERYQ----KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKP 640 +KRIEN NRQVTF+KRR+G+LKKA E+SVLCDAEV ++IFS+ GKLY++CS +S+ + LE+YQ K + ++SA E ++K + +Q R+L GE+L L KEL +E LD + + ++D +++L + NK L +L + + L+ S D G P Sbjct: 8 IKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSA----------EIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKLHQ----QDIALSGSMRDLELGYHP 184 The following BLAST results are available for this feature:
BLAST of FC931100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931100 ID=FC931100; Name=FC931100; organism=Citrus clementina; type=EST; length=712bpback to top |