FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 5.508e-46
Identity = 90/194 (46.39%), Postives = 124/194 (63.92%), Query Frame = 1
Query:  151 SEEGLWDLYERWRSHHTVSRS-----LDEKHKRFNVFKQNVMHV--HQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS--IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            ++E +  +Y +W + H  + +     ++++ KRFN+FK N+  +  H  +  +  YKL L KF D+TN E+   Y G++ +  R     +         V    +P +VDWR+KG+V  +KDQG CGSCWAFST AAVEGIN I+T +L+SLSEQELVDCD   NQGCNGGLM+ AF+FI K GG+NTE  YPY
Sbjct:   41 TDEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPY 234          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 9.395e-46
Identity = 93/202 (46.04%), Postives = 127/202 (62.87%), Query Frame = 1
Query:  151 SEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKP----YKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFSRK 741
            SEE    LY  W++ H  S  ++ E+ +R+  F+ N+ ++ + N         ++L LN+FAD+TN E+  TY G + K  R     + +  ++     ++P SVDWR KG+V  +KDQG CGSCWAFS IAAVEGIN I+T  L+SLSEQELVDCDT  N+GCNGGLM+ AF+FI   GG++TE  YPY    E    +RK
Sbjct:   32 SEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRE---RKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRK 230          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.694e-42
Identity = 91/197 (46.19%), Postives = 121/197 (61.42%), Query Frame = 1
Query:  130 FHEKELESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTR--GNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            + + +L S E L  L++ W   H+ +  S+DEK  RF +F+ N+M++ +TNK +  Y L LN FAD++N EF   Y G   +    F G     N  F Y  VT+ P S+DWR KG+VT VK+QG CGSCWAFSTIA VEGIN I+T  L+ LSEQELVDCD   + GC GG    + +++    GV+T   YPY A
Sbjct:   33 YSQDDLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAED---FTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCD-KHSYGCKGGYQTTSLQYV-ANNGVHTSKVYPYQA 224          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.075e-41
Identity = 89/196 (45.41%), Postives = 124/196 (63.27%), Query Frame = 1
Query:  136 EKELE-SEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKM-DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            E E+E +E  +  +YE+W   +  +   L EK +RF +FK N+  V + N + D+ +++ L +FAD+TN EF + Y   K++  +    T     ++Y +   +P  VDWR  G+V +VKDQG CGSCWAFS + AVEGIN I T +L+SLSEQELVDCD    N GC+GG+M  AFEFI K GG+ T+  YPY A
Sbjct:   30 ETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTE---RYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNA 222          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.458e-40
Identity = 88/195 (45.13%), Postives = 122/195 (62.56%), Query Frame = 1
Query:  130 FHEKELESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            + + +L S E L  L+  W  +H+    ++DEK  RF +FK N+ ++ +TNK +  Y L LN+FAD++N EF   Y GS I    + Q    +  F+     ++P +VDWRKKG+VT V+ QG CGSCWAFS +A VEGIN I T KLV LSEQELVDC+  ++ GC GG    A E++  K G++  +KYPY A
Sbjct:   33 YSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDA-TIEQSY--DEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYV-AKNGIHLRSKYPYKA 222          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.458e-40
Identity = 98/207 (47.34%), Postives = 130/207 (62.80%), Query Frame = 1
Query:  115 VEGFDFHEKELESEEGLWDLYERWRSHHTVSRS--LDEKHKRFNVFKQNVMHVHQTN-KMDKP--YKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTA-VKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAM 714
            V G +  E E  +   LW L    R     SR+  + E  +RF VF  N+  V   N + D+   ++L +N+FAD+TN EF +TY G+        +G R    + +  V ++P SVDWR KG+V A VK+QGQCGSCWAFS +AAVEGIN I+T +LVSLSEQELV+C  + QN GCNGG+M+ AF FI + GG++TE  YPY AM
Sbjct:   48 VRGLERTEAEARAAYDLW-LARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAG----RGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAM 249          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.516e-40
Identity = 82/169 (48.52%), Postives = 116/169 (68.64%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTN-KMDKP--YKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAM 714
            E  +RF VF  N+  V   N + D+   ++L +N+FAD+TN EF +T+ G+K+       G R    + +  V  +P SVDWR+KG+V  VK+QGQCGSCWAFS ++ VE IN ++T ++++LSEQELV+C T+ QN GCNGGLM+ AF+FI K GG++TE  YPY A+
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGER----YRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAV 234          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 2.927e-39
Identity = 85/198 (42.93%), Postives = 119/198 (60.10%), Query Frame = 1
Query:  130 FHEKELESEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMME 720
            + + +L S E L  L+  W   H  + +++DEK  RF +FK N+ ++ + NKM   Y L LN+F+D++N EF   Y GS  +    +     +  F+   +  +P SVDWR KG+VT VK QG C SCWAFST+A VEGIN I T  LV LSEQELVDCD  Q+ GCN G    + +++  + G++  AKYPY A  +
Sbjct:   33 YSQDDLTSTERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGSLPED---YTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD-KQSYGCNRGYQSTSLQYV-AQNGIHLRAKYPYIAKQQ 225          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.210e-38
Identity = 82/189 (43.39%), Postives = 111/189 (58.73%), Query Frame = 1
Query:  151 SEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTN-KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            SE      +  W        S  E   R+++FK N+ +V   N K D    L LN FAD+TN E+  TY G+++  H  + G  G        + + P S+DWR K +VT +KDQGQCGSCW+FST  + EG + + T KLVSLSEQ LVDC   ++N GC+GGLM  AF++I K  G++TE+ YPY A
Sbjct:   28 SESQYRTAFTEWTLKFNRQYSSSEFSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHS-YNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCDGGLMNNAFDYIIKNKGIDTESSYPYTA 215          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.417e-38
Identity = 85/183 (46.45%), Postives = 113/183 (61.75%), Query Frame = 1
Query:  172 LYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNK-MDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQN-QGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            +YE W   +  S  SL E  +RF +FK+ +  + + N   ++ YK+ LN+FAD+T+ EF STY G     ++     R       G+V  +PS VDWR  G+V  +K QG+CG CWAFS IA VEGIN I+T  L+SLSEQEL+DC   QN +GCNGG +   F+FI   GG+NTE  YPY A
Sbjct:   41 MYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRV--GQV--LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTA 219          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
GCP1_ARATH5.508e-4646.39Germination-specific cysteine protease 1 OS=Arabid... [more]
ORYA_ORYSJ9.395e-4646.04Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
PAPA2_CARPA3.694e-4246.19Chymopapain OS=Carica papaya PE=1 SV=2[more]
CPR1_ARATH1.075e-4145.41Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
PAPA3_CARPA3.458e-4045.13Caricain OS=Carica papaya PE=1 SV=2[more]
CYSP1_ORYSJ3.458e-4047.34Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
ORYB_ORYSJ4.516e-4048.52Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
PAPA4_CARPA2.927e-3942.93Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSP2_DICDI7.210e-3843.39Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
ACTN_ACTDE9.417e-3846.45Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
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