FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.848e-26
Identity = 70/207 (33.82%), Postives = 112/207 (54.11%), Query Frame = 1
Query:  112 IVEGFDFHEKELESEEGLWDLYERWRSHHT-VSRSLDEKHKRFN--VFKQNVMHVHQTNKMDKP----YKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFM-YGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +V+ F    ++   +  +  L   W+ + T + +  D+K   F   +F+ N +   + NK  +     Y   LN  AD+T+ EF     G ++ +    +G R    F  Y K   +P  VDWR KG+VT V++QG+CGSC+AF+T AA+E  +  MT +L+ LS Q +VDC  +  N GC+GG M  AF++  +  G+  E++YPY
Sbjct:   67 VVQEFLKKTEDNGEQRAMEKLETEWKDYVTALGKHYDQKENNFRMAIFESNELMTERINKKYEQGLVSYTTALNDLADLTDEEFM-VRNGLRLPNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLGNNGCSGGYMPTAFQYASRY-GIAMESRYPY 271          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.269e-26
Identity = 67/185 (36.22%), Postives = 103/185 (55.68%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQN--VMHVHQTNKMD--KPYKLKLNKFADMTNHEFASTYAG---SKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-DTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +  WR+ H  + +++E+  R  V+++N  ++ +H    ++    + + +N F D+TN EF     G    KIK   +FQ  +    F+Y     +P  VDWR  G VT VK+QG C S WAFS   ++EG     T +LV LSEQ L+DC  ++    C+GG M+ AF+++K  GG+ TE  YPY
Sbjct:   29 WNEWRTKHGKAYNVNEERLRRAVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVFQDHQ----FLY-----VPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPY 204          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.080e-25
Identity = 69/188 (36.70%), Postives = 100/188 (53.19%), Query Frame = 1
Query:  175 YERW-RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAG----------SKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            YE + + H+    + D++   F  FK+N+  ++  N +       +NKF+D+    F + +AG          S    +R+ +        + G     P S DWRK   VT VK+QG CGSCWAF+ I  +E    IM + L+ LSEQ+L+DCD   +QGC+GGLM LAF+ I + GGV  E  YPY
Sbjct:   33 YENFIKQHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDIDKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVT-----VAGPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDR-VDQGCDGGLMHLAFQEIIRIGGVEHEIDYPY 214          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.410e-25
Identity = 73/170 (42.94%), Postives = 94/170 (55.29%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNKMDKPYKLKLN-KFADMTNHEFASTYAGSK-----IKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKK--KGGVNTEAKYPY 705
            E+  RFN FKQN+   +  N  +      ++ KFAD+T  EFA  Y         +K+H+           +     S   SVDWR KG+VT VK+QG CGSCWAFS I  +EG      + LVSLSEQ LV CD + ++GCNGGLM+ A  +I +   G V TEA YPY
Sbjct:   58 EEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKNHK-------EDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY 219          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.406e-25
Identity = 73/170 (42.94%), Postives = 93/170 (54.71%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNKMDKPYKLKLN-KFADMTNHEFASTYAGSK-----IKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKK--KGGVNTEAKYPY 705
            E+  RFN FKQN+   +  N  +      ++ KFAD+T  EFA  Y         +K H+           +     S   SVDWR KG+VT VK+QG CGSCWAFS I  +EG      + LVSLSEQ LV CD + ++GCNGGLM+ A  +I +   G V TEA YPY
Sbjct:   58 EEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKDHK-------EDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY 219          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.406e-25
Identity = 71/196 (36.22%), Postives = 99/196 (50.51%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNK------------MDKPYKLKLNKFADMTNHEFASTYAGSKI---KHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTF-SRKFPSSVN 759
            E   R+NVFK N+  ++  N+            +    +  +NKF+D T  E   +  G  +   +H+ + +     G         +P   DWR    VT +KDQG CGSCWAF  I  +E    I  NKL+ LSEQ+L+DCD + + GCNGGLM LAF+ +   GGV TEA YPY    +  T  +RK    +N
Sbjct:   73 EYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGA----PDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD-EVDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSEQMCTLDNRKIAVKLN 263          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.406e-25
Identity = 59/167 (35.33%), Postives = 94/167 (56.29%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            S  EK +RF +F+ N+  +   N+ D   + ++NKF+D++  E  S Y G  +   +           +       P   DWR+   VT+VK+QG CG+CWAF+T+ ++E    I  ++L++LSEQ+L+DCD   + GC+GGL+  A+E +   GG+  E  YPY A
Sbjct:   41 SESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGLSLPLQKQ---NFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF-VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEA 203          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.142e-25
Identity = 73/190 (38.42%), Postives = 100/190 (52.63%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFI--KKKGGVNTEAKYPY 705
            L +EE L   +  ++  H  V  S  E+  R +VF++N+         +      +  F+D+T  EF S Y           +  R     +  +V   P++VDWR +G+VTAVKDQGQCGSCWAFS I  VE    +  + L +LSEQ LV CD   + GC+GGLM  AFE+I  +  G V TE  YPY
Sbjct:   28 LHAEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERAR---VPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCD-KTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPY 213          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.142e-25
Identity = 67/183 (36.61%), Postives = 96/183 (52.46%), Query Frame = 1
Query:  190 SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK-PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            +++    S +E   R +VF  N++   +   +D+   +  + KF+D+T  EF + Y  + ++      G +       G +   P   DWR KG+VT VKDQG CGSCWAFS    VEG   +    L+SLSEQEL+DCD   ++ C GGL   A+  IK  GG+ TE  Y Y   M+   FS
Sbjct:  193 TYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLLRKE---PGNKMKQAKSVGDLA--PPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD-KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFS 369          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.104e-25
Identity = 62/172 (36.05%), Postives = 94/172 (54.65%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSS-----VDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            S  EK  RF +F+ N+  +   N  D   + ++NKF+D++  E  S Y G  +           N  F    V + P        DWR+   VT+VK+QG CG+CWAF+T+ ++E    I  ++L++LSEQ+L+DCD   + GC+GGL+  A+E +   GG+  E  YPY A
Sbjct:   41 SKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISKYTGLSLPLQ--------NQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF-VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEA 203          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATL_BRUPA4.848e-2633.82Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
TEST2_MOUSE8.269e-2636.22Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATV_NPVST1.080e-2536.70Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
LMCPA_LEIME1.410e-2542.94Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP1_LEIPI2.406e-2542.94Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATV_NPVHZ2.406e-2536.22Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATV_NPVAP2.406e-2535.33Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CYSP_TRYCR3.142e-2538.42Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATF_HUMAN3.142e-2536.61Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATV_NPVCD4.104e-2536.05Viral cathepsin OS=Choristoneura fumiferana defect... [more]

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Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
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