FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.360e-25
Identity = 76/199 (38.19%), Postives = 104/199 (52.26%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQ--TNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDW--RKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVNTEAK-YPYXA 711
            +E+  E    +LY  W+  +    +   DE + R+ VF  N+ ++     +  +  + L+LN+FADM+  EFA TY   K+   R  +    N  F Y       + VDW   KK    AVK+QG CGSCWAFS + A+E    I  N+   LSEQ+LVDC     N GCNGG M+ AFE++   G    EAK YPY A
Sbjct:   14 QEVSDEIDTANLYANWKMKYNRRYTNQRDEMY-RYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSLKVP--RTAKLNAANSNFQYKG-----AEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYDNDGCNGGWMDSAFEYVADNG--LAEAKDYPYTA 202          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.000e-25
Identity = 58/173 (33.53%), Postives = 102/173 (58.96%), Query Frame = 1
Query:  190 SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSI-PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +++ +     EK +RF++F+Q +  ++  N+++     ++NKFAD++ +E  S Y G  +      Q T    T +  +     P + DWR++  VT++K+Q  CG+CWAF+T+A++E    I  N  + LSEQ+++DCD   + GC+GGL+  AFE + + G +  E +YPY
Sbjct:   37 NYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLNMP----VQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY-VDMGCDGGLLHTAFEQMIQMGELVQEHEYPY 204          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.142e-25
Identity = 61/169 (36.09%), Postives = 94/169 (55.62%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHR-------MFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            EK +R+ +F+ N+  +   N+ D     K+NKF+D++  E  + Y G  +  H        +     G G          P   DWR+   +T+VK+QG CG+CWAF+T+A++E    I  ++L++LSEQ+++DCD+  + GC GGL+  AFE I   GGV  E  YPY
Sbjct:   44 EKLRRYKIFQHNLNDIITKNRNDTAV-YKINKFSDLSKDETIAKYTGLSLPLHTQNFCEVVVLDRPPGKG----------PLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCDS-VDVGCEGGLLHTAFEAIISMGGVQIENDYPY 200          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.559e-24
Identity = 66/204 (32.35%), Postives = 104/204 (50.98%), Query Frame = 1
Query:  109 GIVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            G+  G   H+ +L++E      ++ W++ +  S S  E+  R  V+++N+  +   NK +      + +K+NKF D T+ EF  +     I         + + +        +P   DWR++G VT V++QG+CGSCWAF+   A+EG     T  L  LS Q L+DC  T  N+GC  G    AFE++ K  G+  EA YPY
Sbjct:   13 GVASGAQAHDPKLDAE------WKDWKTKYAKSYSPKEEALRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQNHVSI------GLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPY 204          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.037e-24
Identity = 68/193 (35.23%), Postives = 105/193 (54.40%), Query Frame = 1
Query:  202 VSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTY-------AGSKIKHHRMFQGTRGNGTFMYGKVTSIPS-------------SVDWRKKGSVTAVKDQGQ-CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMM 717
            V RS D++ +RF  F++N  H+ +T+K  +PY L LNKF+D+++ EF + Y         + +  H  F+           K+                  +++W +  +V+ +KDQG  CGSCWAFS+IA+VE +  +  NK   LSEQELV+CD   + GC GGL   A E+I  K GV+ E++ PY  ++
Sbjct:  130 VHRSFDQRVQRFLTFRKNY-HIVKTHKPTEPYSLDLNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCD-KSSMGCAGGLPITALEYIHSK-GVSFESEVPYTGIV 319          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.926e-24
Identity = 66/204 (32.35%), Postives = 100/204 (49.02%), Query Frame = 1
Query:  109 GIVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            G+  G    +  L++E      ++ W+  +  S SL E+  +  V+++ +    +H  + +     + +K+N+F D T+ EF        +  HR      G         + +P  VDWRKKG VT V+ QG C +CWAF+   A+E      T KL  LS Q LVDC   Q N GC GG    AF+++   GG+ +EA YPY
Sbjct:   13 GVASGVPVLDSSLDAE------WQDWKIKYNKSYSLKEEKLKRVVWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHR-----EGKSIMKREAGSILPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPY 205          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.320e-23
Identity = 64/187 (34.22%), Postives = 98/187 (52.41%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGT--RGNGTFM---YGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            ++ W+  +    S +E+  +  V+++NV  +   N+ +      Y +++N FADMT+ EF     G ++  H   +    R  G+F    +    ++P  VDWR +G VT V+ QG C SCWAF    A+EG     T KL+ LS Q L+DC   Q N+GC  G    AF+++   GG+  EA YPY
Sbjct:   29 WQEWKIKYEKLYSPEEEVLKRVVWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGSFFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPY 215          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.320e-23
Identity = 66/184 (35.87%), Postives = 95/184 (51.63%), Query Frame = 1
Query:  190 SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK-PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSI-PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            +++    S +E   R  VF +N++   +   +D+   +  + KF+D+T  EF + Y         + Q   G        +  + P   DWRKKG+VT VK+QG CGSCWAFS    VEG   +    L+SLSEQEL+DCD   ++ C GGL   A+  IK  GG+ TE  Y Y   ++   FS
Sbjct:  171 TYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYLNP------LLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD-KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFS 347          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.724e-23
Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 1
Query:  439 PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            P S+DWR+KG+VT VK+Q  CGSCWAFST+A +EGIN I+T +L+SLSEQEL+DC+  ++ GC+GG    + +++    GV+TE +YPY
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEY-RSHGCDGGYQTPSLQYV-VDNGVHTEREYPY 88          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.552e-23
Identity = 63/204 (30.88%), Postives = 102/204 (50.00%), Query Frame = 1
Query:  109 GIVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMD----KPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            G+  G    +  L++E      ++ W++ +  S S  E+  +  V+++N+  +   NK +      + +++N FAD T  EF  + +   I           N +        +P+  DWRK+G VT V++QG+CGSCWAF+ + A+EG     T  L  LS Q L+DC  ++ N GC  G    AF ++ K  G+  EA YPY
Sbjct:   13 GVASGAPARDPNLDAE------WQDWKTKYAKSYSPVEEELKRAVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIP------AAVTNPSAQKQVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPY 204          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATL1_PARTE5.360e-2538.19Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATV_NPVBS7.000e-2533.53Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATV_NPVEP9.142e-2536.09Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATJ_MOUSE1.559e-2432.35Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CYSP_THEAN2.037e-2435.23Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CATR_MOUSE5.926e-2432.35Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATQ_RAT1.320e-2334.22Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATF_MOUSE1.320e-2335.87Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
MEX1_JACME1.724e-2355.06Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATJ_RAT6.552e-2330.88Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
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