FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.118e-22
Identity = 67/181 (37.02%), Postives = 90/181 (49.72%), Query Frame = 1
Query:  175 YERWRS-HHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAM 714
            +++W + H+ V  +  E   RF VF  N   V      +      LN FADMT+ EF  T+ G   +        +         V + P SVDWR    +   KDQGQCGSCW F T A +EG  +    KL S SEQ+LVDCD   N GC GG    + +FI++  G+  E+ YPY A+
Sbjct:   18 FKQWAATHNKVFANRAEYLYRFAVFLDNKKFVEANANTE------LNVFADMTHEEFIQTHLGMTYEVPETTSNVKA-------AVKAAPESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCDASDN-GCEGGHPSNSLKFIQENNGLGLESDYPYKAV 182          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.460e-22
Identity = 68/214 (31.78%), Postives = 108/214 (50.47%), Query Frame = 1
Query:  118 EGFDFHEKELESEEGLWDLYERWRSHHTVSRSLD-EKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS----------------------IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTE 690
            +GF   + +LE E  ++  +E + S +    +   E+  R   F+ N + V +  K D+PY   +N+F+D+T  EF   +   K       + T  NG ++   + +                         ++DWR+  SVT+VKDQ  CG CWAFST+ +VEG      +K   LS QEL+DCD+  N GC GGL+E A+E+++K G V+ +
Sbjct:  108 DGFLSDDPKLEYE--VYREFEEFNSKYNRRHATQQERLNRLVTFRSNYLEVKE-QKGDEPYVKGINRFSDLTEREFYKLFPVMKPP-----KATYSNGYYLLSHMANKTYLKNLKKALNTDEDVDLAKLTGENLDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCDSFSN-GCQGGLLESAYEYVRKYGLVSAK 312          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.247e-22
Identity = 59/167 (35.33%), Postives = 95/167 (56.89%), Query Frame = 1
Query:  217 DEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKI---KHHRMFQGTRGNGTFMYGKVTSI-PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +E+  +   FK N+  +++ N   K     +N+++D+  +       G ++   K+   F  T  +   +  +  ++ P ++DWR K  VT VK+Q +CGSCWAFSTIA +E + +I  +K ++LSEQ LV+CD + N GC GGLM  A E I ++GGV +    PY
Sbjct:   47 EERAIKLENFKNNLKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD-NINNGCAGGLMHWALESILQEGGVVSAENEPY 212          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 58/183 (31.69%), Postives = 98/183 (53.55%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVT-SIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +++W+  +  + SL+E+ ++  V++ N+    +H  +       + +++N F DMT  EF        +        T   G  +  +++ ++P  ++W+K+G VT V+ QG+C SCWAFS   A+EG     T +L+ LS Q LVDC   Q N GC  G   LA  ++ + GG+ +EA YPY
Sbjct:   29 WQKWKIKYGKAYSLEEEGQKRAVWEDNMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKVMIEIPVP-------TVKKGKSVQKRLSVNLPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPY 204          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 65/182 (35.71%), Postives = 94/182 (51.65%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLN-KFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEG---INHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +  W S +    +  EK +R  +F  N   V   NK+   +KL ++  FA MTN E+ +     +         T  NG   Y  + + P SVDWRK+G VT ++DQ QCGSC+ F ++AA+EG   I        + LSE+ +V C  D  N GCNGGL    +++I +  GV  E+ YPY
Sbjct:   16 FNTWASKNNKHFTAIEKLRRRAIFNMNAKFVDSFNKIGS-FKLSVDGPFAAMTNEEYRTLLKSKRT--------TEENGQVKYLNIQA-PESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEH-GVAKESDYPY 186          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21
Identity = 47/93 (50.54%), Postives = 60/93 (64.52%), Query Frame = 1
Query:  433 SIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            ++P S+DWR  G+V  VK+QG CG CWAF+ IA VEGI  I    LV LSEQE++DC    + GC GG +  A++FI    GV T+  YPY A
Sbjct:    1 AVPQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDCAV--SYGCKGGWVNRAYDFIISNNGVTTDENYPYRA 91          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.510e-19
Identity = 61/182 (33.52%), Postives = 96/182 (52.75%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLN-KFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEG---INHIMTNKLVSLSEQELVDCD-TDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +  W +++    +  E  +R  +F  N   V + N+ +  +KL ++  FA MTN E+ S          ++ +     G   Y  + + P +VDWRKKG VT ++DQG CGSC+ F +IAA+EG   I     ++ + LSE+ +V C   D N GCNGGL    + +I  + G+  E+ YPY
Sbjct:   16 FNTWVANNNKHFTAVESLRRRAIFNMNARIVAENNRKET-FKLSVDGPFAAMTNEEYNSLL--------KLKRSGEEKGEVRYLNIQA-PKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYI-MENGIAKESDYPY 186          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.576e-19
Identity = 62/182 (34.07%), Postives = 92/182 (50.55%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLN-KFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEG---INHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +  W +++    +  E  +R  +F  N   V + NK    +KL ++  FA MTN E+ +     +            NG   Y  + + P SVDWR +G VT ++DQ QCGSC+ F ++AA+EG   I        + LSE+ LV C  D  N GCNGGL    +++I  + GV  E+ YPY
Sbjct:    9 FNTWAANNNKHFTAVEALRRRAIFNMNARFVAEFNKKGS-FKLSVDGPFAAMTNEEYRTLLKSKRTVEE--------NGKVTYLNIQA-PESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYI-IQNGVAKESDYPY 179          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 55/179 (30.73%), Postives = 94/179 (52.51%), Query Frame = 1
Query:  187 RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKP--YKLKLNKFADMTNHEFASTYAG-----------------SKIKHHRMFQGTRGNGTFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFI 663
            + H+ V +++DE+ ++F +FK N + +   NK++K   YK K+N+F+D +  E    +                   + +K + +      NG      + S +P  +D+R+KG V   KDQG CGSCWAF+++  +E +       ++S SEQE+VDC  D N GC+GG    +F ++
Sbjct:  230 KEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSKD-NFGCDGGHPFYSFLYV 407          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 62/181 (34.25%), Postives = 92/181 (50.83%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLN-KFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEG---INHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +  W S +    +  EK +R  +F  N   V   NK+   +KL ++  FA MTN E+ +     +         T  NG   Y  + + P SVDWRK+G VT ++DQ QCGSC+ F ++AA+EG   I        + LSE+ +     + N GCNGGL    +++I +  GV  E+ YPY
Sbjct:   12 FNTWASKNNKHFTAIEKLRRRAIFNMNAKFVDSFNKIGS-FKLSVDGPFAAMTNEEYRTLLKSKRT--------TEENGQVKYLNIQA-PESVDWRKEGKVTPLRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMQCTRDNGNNGCNGGLGSNVYDYIIEH-GVAKESDYPY 181          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
ACP1_ENTHI1.118e-2237.02Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CYSP_THEPA1.460e-2231.78Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATV_GVCP4.247e-2235.33Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATM_MOUSE3.595e-2131.69Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CPP2_ENTHI4.695e-2135.71Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
MDO1_PSEMR8.009e-2150.54Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CPP1_ENTHI1.510e-1933.52Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CPP3_ENTHI2.576e-1934.07Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CYSP_PLAFA4.395e-1930.73Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
ACP2_ENTHI4.395e-1934.25Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
back to top