FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.346e-18
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 1
Query:  433 SIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            ++P S+DWR  G+VT+VK+Q  CG+CWAF+ IA VE I  I    L  LSEQ+++DC   +  GC GG    AFEFI    GV + A YPY A
Sbjct:    1 AVPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC--AKGYGCKGGWEFRAFEFIISNKGVASGAIYPYKA 91          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.016e-17
Identity = 58/184 (31.52%), Postives = 99/184 (53.80%), Query Frame = 1
Query:  208 RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAG-----SKIKHHRMFQGTRGNGTFMYGKVTS---------IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNK-LVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAM 714
            + ++E+ +++  FK N + + + N+ ++ YK+K+N+F+D +  +F S +         +K   +   +  N       VTS         +P  +D+R+KG V   KDQG CGSCWAF+++  VE +     NK +++LSEQE+VDC +  N GC+GG    +F +   + G+     Y Y AM
Sbjct:  249 KDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC-SKLNFGCDGGHPFYSFIY-AIENGICMGDDYKYKAM 430          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.563e-16
Identity = 56/146 (38.36%), Postives = 77/146 (52.74%), Query Frame = 1
Query:  283 MDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRM---FQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            ++K  K ++N+F+DM+  EF + Y  S   +  +   F    G      G V +IP+ +D R  G VT +K+Q  CGSCWAFS +A VE       N  + LSEQELVDC +    GC G  +     +I+K G V  E  YPY A
Sbjct:   57 IEKAGKGRINQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAV-NIPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDCAS--QHGCGGDTVLNGLRYIQKNGVVE-EQSYPYKA 198          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 57/200 (28.50%), Postives = 94/200 (47.00%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKM-DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIP----SSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFSRKFPSSVN 759
            +ERW   +    +  EK  R  ++  N   + + N+  D  Y++  N+F  +++ EF   Y           Q +  +   M   +  +      +VDWR   + T VK+QGQC S WAFS   ++E    I   + ++ S Q++VDCD + N GC+GG    A E++ + G V++   YPY A  +    SR     +N
Sbjct:   29 FERWALKNNKFYTESEKLYRMEIYNSNKRMIEEHNQREDVTYQMGENQFMTLSHEEFVDLY----------LQKSDSSVNIMGASLPEVQLEGLGAVDWR---NYTTVKEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN-NTGCSGGYNAYAMEYVLRVGLVSS-TNYPYVAKNQTCKQSRNGTYFIN 213          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.911e-14
Identity = 49/137 (35.77%), Postives = 71/137 (51.82%), Query Frame = 1
Query:  307 LNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSI--PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            +N  +D++  EF + Y  S     ++      N      ++ S+  PS +D R   +VT ++ QG CGSCWAFS +AA E       N  + LSEQELVDC +    GC+G  +    E+I++ G V  E  YPY A
Sbjct:   64 INHLSDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACRINSVNVPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDCAS--QHGCHGDTIPRGIEYIQQNGVVE-ERSYPYVA 197          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14
Identity = 58/179 (32.40%), Postives = 86/179 (48.04%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYA-------GSKIKHHRMFQGTRGNGTFMY--GKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGIN-HIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            ++DE+ +RF  FK   M   + N+M       Y  K+N+++D +  EF + +          K K+    +    N   +    K    P S D+R K +    KDQG CGSCWAF+ I   E +  H      +S SEQ++VDC T +N GC+GG    AF ++    GV    +YPY
Sbjct:  175 NMDEQLQRFENFKIRYMKTQKHNEMVGKNGLTYVQKVNQYSDFSKEEFDNYFKKLLSVPMDLKSKYIVPLKKHLANTNLISVDNKSKDFPDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCST-ENYGCDGGNPFYAFLYM-INNGVCLGDEYPY 351          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14
Identity = 49/164 (29.88%), Postives = 83/164 (50.61%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNKMDK-PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRK-KGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            E  +R ++F  N+    +  + D    +     F+D+T  EF   Y G +    R    T+   +  +G+  S+P + DWRK K  +++VK+QG C  CWA +    ++ +  I   + V +S QEL+DC+   N GCNGG +  A+  +    G+ +E  YP+
Sbjct:   56 EYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLY-GQERSPERTPNMTKKVESNTWGE--SVPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGN-GCNGGFVWDAYLTVLNNSGLASEKDYPF 215          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14
Identity = 52/175 (29.71%), Postives = 82/175 (46.86%), Query Frame = 1
Query:  217 DEKHKRFNVFKQNVMHVHQTNKMDK-PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGT-----RGNGTFMYGKVTSIPSSVDWRK-KGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMME 720
            +E  +R ++F  N+    Q  + D    +  +  F+D+T  EF   Y       HR   G      R  G+  +G+  S+P + DWRK  G +++VK Q  C  CWA +    +E +  I   + V LS QEL+DC      GC GG +  AF  +    G+ +E  YP+   ++
Sbjct:   57 EEYARRLDIFAHNLAQAQQLEEEDLGTAEFGVTPFSDLTEEEFGRLYG------HRRMDGEAPKVGREVGSEEWGE--SVPPTCDWRKLDGVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDCGR-CGDGCRGGFVWDAFITVLNNSGLASEKDYPFQGQVK 222          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.603e-13
Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 1
Query:  433 SIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            S+PS +D R   +VT ++ QG CGSCWAFS +A+ E       N  + L+EQELVDC   QN GC+G  +    E+I++ G V  E  YPY A
Sbjct:  108 SLPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC-ASQN-GCHGDTIPRGIEYIQQNGVVQ-EHYYPYVA 197          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13
Identity = 46/136 (33.82%), Postives = 68/136 (50.00%), Query Frame = 1
Query:  307 LNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKK-KGGVNTEAKYPYXA 711
            +N+F+ +   EF + Y  SK      +         M     S+P   DWR K  VT V++Q  CG CWAFS + AVE    I    L  LS Q+++DC  + N GCNGG    A  ++ K +  +  +++YP+ A
Sbjct:   69 INQFSYLFPEEFKAIYLRSKPSKFPRYSAE----VHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYN-NYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKA 199          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
BROM2_ANACO6.346e-1849.46Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP_PLAVS7.016e-1731.52Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
PEPT1_PSOOV1.563e-1638.36Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CATL3_PARTE8.577e-1528.50Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
PEPT1_DERFA1.911e-1435.77Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
CYSP_PLAVN2.495e-1432.40Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
CATW_MOUSE2.495e-1429.88Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATW_FELCA4.257e-1429.71Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
PEPT1_EURMA3.603e-1345.16Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
CATO_HUMAN4.706e-1333.82Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
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