FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.098e-37
Identity = 78/192 (40.62%), Postives = 117/192 (60.94%), Query Frame = 1
Query:  157 EGLWD-----LYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAM 714
            +G++D     ++E W   H  V  S+ EK +R  +F+ N+  +   N  +  Y+L LN+FAD++ HE+     G+  +  R       +  +       +P SVDWR +G+VT VKDQG C SCWAFST+ AVEG+N I+T +LV+LSEQ+L++C+  +N GC GG +E A+EFI   GG+ T+  YPY A+
Sbjct:   45 QGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCN-KENNGCGGGKVETAYEFIMNNGGLGTDNDYPYKAL 235          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.578e-37
Identity = 83/191 (43.46%), Postives = 113/191 (59.16%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            K+  SE    + +  W   H  S + +E   R+N+FK N+ +V Q N       L LN FAD+TN E+ +TY G+K     +  GT+    F     TS  +S DWR +G+VT VK+QGQCG CW+FST  + EG +     +LVSLSEQ L+DC T +N GC+GGLM  AFE+I    G++TE+ YPY A
Sbjct:   18 KQQFSELQYRNAFTDWMITHQKSYTSEEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDASSLI-GTQEEKVF----TTSSAASKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCST-ENSGCDGGLMTYAFEYIINNNGIDTESSYPYKA 202          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.578e-37
Identity = 76/182 (41.76%), Postives = 112/182 (61.54%), Query Frame = 1
Query:  172 LYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAM 714
            ++E W   H  V  S+ EK +R  +F+ N+  ++  N  +  Y+L L  FAD++ HE+     G+  +  R       +  +       +P SVDWR +G+VT VKDQG C SCWAFST+ AVEG+N I+T +LV+LSEQ+L++C+  +N GC GG +E A+EFI K GG+ T+  YPY A+
Sbjct:   48 IFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCN-KENNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAV 228          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 155.221 bits (391), Expect = 3.578e-37
Identity = 84/188 (44.68%), Postives = 112/188 (59.57%), Query Frame = 1
Query:  172 LYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNK-MDKPYKLKLNKFADMTNHEFASTY-----AGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQN-QGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            +YE W   +  S  SL E  +RF +FK+ +  + + N   ++ YK+ LN+FAD+T+ EF STY       +K K    ++   G           +PS VDWR  G+V  +K QG+CG CWAFS IA VEGIN I+T  L+SLSEQEL+DC   QN +GCNGG +   F+FI   GG+NTE  YPY A
Sbjct:   41 MYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQ---------VLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTA 219          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.029e-36
Identity = 84/212 (39.62%), Postives = 117/212 (55.19%), Query Frame = 1
Query:  130 FHEKELESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKV-----TSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFSRKFP 747
            + + +L S E L  L+E W   H+ + +++DEK  RF +FK N+ ++ +TNK +  Y L LN FADM+N EF   Y GS         G        Y +V      +IP  VDWR+KG+VT VK+QG CGSCWAFS +  +EGI  I T  L   SEQEL+DCD  ++ GCNGG    A + + +  G++    YPY  +  +     K P
Sbjct:   33 YSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGS-------IAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDR-RSYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGP 235          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.749e-36
Identity = 78/184 (42.39%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            + +W+S H      +E+  R  V+++N+    +H  + +     + +++N F DMTN EF     G + + H+  +       F    +  IP +VDWR+KG VT VK+QGQCGSCWAFS    +EG   + T KL+SLSEQ LVDC  DQ NQGCNGGLM+ AF++IK+ GG+++E  YPY A
Sbjct:   29 WHQWKSTHRRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGR------LFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEA 206          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.151e-35
Identity = 78/172 (45.35%), Postives = 105/172 (61.05%), Query Frame = 1
Query:  214 LDEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC--DTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            L+E+  R NVF  N+ ++ + NK     +  Y L +N+F+DMTN +F +   G K       +G R    F         + VDWR KG+VT VKDQGQCGSCWAFST   +EG + + T +LVSLSEQ+LVDC   +  NQGCNGG +E A  +++  GGV+TE+ YPY A
Sbjct:   34 LEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYK-------KGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEA 198          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.151e-35
Identity = 79/180 (43.89%), Postives = 110/180 (61.11%), Query Frame = 1
Query:  181 RWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +W++ H     ++E+  R  V+++N+    +H  + ++    + + +N F DMTN EF     G + + H+  +       F    V  +P SVDWR+KG VTAVK+QGQCGSCWAFS   A+EG     T KLVSLSEQ LVDC   Q NQGCNGGLM+ AF+++K  GG++TE  YPY
Sbjct:   31 KWKATHGRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGK------VFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPY 204          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.503e-35
Identity = 77/184 (41.85%), Postives = 111/184 (60.33%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            + +W+S H      +E+  R  ++++N+    +H  + +     + +++N F DMTN EF     G + + H+  +       F    +  IP SVDWR+KG VT VK+QGQCGSCWAFS    +EG   + T KL+SLSEQ LVDC   Q NQGCNGGLM+ AF++IK+ GG+++E  YPY A
Sbjct:   29 WHQWKSTHRRLYGTNEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGR------LFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEA 206          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.713e-35
Identity = 84/196 (42.86%), Postives = 115/196 (58.67%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPS-SVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMT---NKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            K+  SE    + +  W   H  + S +E + R+ +FK N+ +VHQ N       L LN FAD+TN E+ +TY G+       F G+   GT    K+ S P+ +VDWR +G+VT +K+QGQCG CW+FST  + EG + I +     LVSLSEQ L+DC     N GC GGLM LAFE+I    G++TE+ YPY A
Sbjct:   18 KQQFSELQYRNAFTNWMQAHQRTYSSEEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTP------FDGSALIGT-EEEKIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTA 206          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CPR4_ARATH2.098e-3740.63Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CYSP5_DICDI3.578e-3743.46Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CPR3_ARATH3.578e-3741.76Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
ACTN_ACTCH3.578e-3744.68Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
PAPA1_CARPA3.029e-3639.62Papain OS=Carica papaya PE=1 SV=1[more]
CATL1_RAT6.749e-3642.39Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CYSP1_HOMAM1.151e-3545.35Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATL1_PIG1.151e-3543.89Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_MOUSE1.503e-3541.85Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CYSP4_DICDI5.713e-3542.86Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
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