FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.721e-32
Identity = 59/91 (64.84%), Postives = 73/91 (80.22%), Query Frame = 1
Query:  433 SIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            S+P S+DWR+KG +  VKDQG CGSCWAFS +AA+E IN I+T  L+SLSEQELVDCD   N+GC+GGLM+ AFEF+ K GG++TE  YPY
Sbjct:   17 SLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPY 107          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 7.721e-32
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLK----LNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGK-VTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD---------QNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            S +E  +RF +FK N+  + + N +   +K      +NKFAD+++ EF + Y  +K     +F        ++  + + SIP++ DWR +G+VT VK+QGQCGSCW+FST   VEG + I  NKLVSLSEQ LVDCD +          ++GCNGGL   A+ +I K GG+ TE+ YPY A
Sbjct:   41 SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNK---EAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTA 218          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.008e-31
Identity = 78/201 (38.81%), Postives = 113/201 (56.22%), Query Frame = 1
Query:  127 DFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD--------QNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            D  E ++ S E  + L+++      V  S++E + RF+VFK N++   +  KMD   +  + +F+D+T  EF   + G K      F+  +           ++P   DWR +G+VT VK+QG CGSCW+FST  A+EG + + T KLVSLSEQ+LVDCD +         + GCNGGLM  AFE+  K GG+  E  YPY
Sbjct:   35 DETEPKVLSSEDHFTLFKK--KFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVK----GGFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPY 229          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.317e-31
Identity = 76/188 (40.43%), Postives = 104/188 (55.32%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGS-VTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTF 732
            ++ W   H    SL+E H R  VF  N   ++  N  +  +KL LN+F+DM+  E    Y  S+ ++    +G    GT  Y      P S+DWRKKG+ V+ VK+QG CGSCW FST  A+E    I T K++SL+EQ+LVDC  +  N GC GGL   AFE+I+   G+  E  YPY    +H  F
Sbjct:   35 FKSWMVQHQKKYSLEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSEPQNCSATKGNYLRGTGPY------PPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKF 216          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.247e-31
Identity = 72/176 (40.91%), Postives = 105/176 (59.66%), Query Frame = 1
Query:  193 HHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNG----TFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            ++ V +   EK  RF +FKQN+  ++  N ++     ++N  AD++++E      G K+    + +G + N     T + G  +  +P S DWR + SVT+VK Q +CGSCWAFS +A +E + HI  N  + LSEQ+LVDCD   N GCNGGLM  AFE I + GG++ EA YPY
Sbjct:   50 YNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLS---LMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPY 221          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.832e-31
Identity = 79/186 (42.47%), Postives = 106/186 (56.99%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHK-RFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD--TDQNQ------GCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +  ++S  + S +  E+H  RF VFK N++        D   +  + KF+D+T  EF   + G K K  R+    +          T++P   DWR+KG+VT VKDQG CGSCWAFST  A+EG +++ T KLVSLSEQ+LVDCD   D  Q      GCNGGLM  AFE++ + GGV  E  Y Y
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLK-KRLRLPAHAQKAPIL---PTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAY 229          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31
Identity = 70/163 (42.94%), Postives = 95/163 (58.28%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQ-GCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            E  +RF +F +++  V  TN+   PY+L +N+FADM+  EF ++  G+         G             ++P + DWR+ G V+ VKDQG CGSCW FST  ++E      T K VSLSEQ+LVDC T  N  GC+GGL   AFE+IK  GG++TE  YPY
Sbjct:   78 EVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNH-----RMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPY 235          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.537e-31
Identity = 74/172 (43.02%), Postives = 101/172 (58.72%), Query Frame = 1
Query:  217 DEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSS--VDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQN-QGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            +E   R  +F+QN  ++ + NK     +  + L +NKF DMT  EF +   G+  +            +  Y K  + P +  VDWR KG+VT VKDQGQCGSCWAFST  ++EG + + T  L+SL+EQ+LVDC      QGCNGG M  AF++IK   G++TEA YPY A
Sbjct:   35 EEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPV-------SVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEA 199          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.115e-30
Identity = 69/166 (41.57%), Postives = 95/166 (57.23%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            S  E  +RF +F +++  V  TN+   PY+L +N+F+DM+  EF +T  G+         G       +     ++P + DWR+ G V+ VK+Q  CGSCW FST  A+E      T K +SLSEQ+LVDC     N GCNGGL   AFE+IK  GG++TE  YPY
Sbjct:   74 SAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNH-----LMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPY 234          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.439e-30
Identity = 75/198 (37.88%), Postives = 106/198 (53.54%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD--------QNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            E ++ + E  + L++R      V  S +E   RF+VFK N+    +  K+D      + +F+D+T  EF   + G +      F+  +           ++P   DWR  G+VT VK+QG CGSCW+FS   A+EG N + T KLVSLSEQ+LVDCD +         + GCNGGLM  AFE+  K GG+  E  YPY
Sbjct:   41 EPQVLTSEDHFSLFKR--KFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSG----FKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPY 232          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSPL_SOLLC7.721e-3264.84Low-temperature-induced cysteine proteinase (Fragm... [more]
CYSP1_DICDI7.721e-3241.99Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
A494_ARATH1.008e-3138.81Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CATH_PIG1.317e-3140.43Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATV_GVXN2.247e-3140.91Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CYSP_PEA3.832e-3142.47Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
ORYC_ORYSJ6.536e-3142.94Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP2_HOMAM8.537e-3143.02Digestive cysteine proteinase 2 OS=Homarus america... [more]
ALEU_HORVU1.115e-3041.57Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
RD19A_ARATH9.439e-3037.88Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
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