FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14473 contig Ccv1_Contig14473:1..766. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 130.568 bits (327), Expect = 9.439e-30
Identity = 73/179 (40.78%), Postives = 99/179 (55.31%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGS-VTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            ++ W S H  + S +E H R   F  N   ++  N  +  +K+ LN+F+DM+  E    Y  S+ ++    +     GT  Y      P SVDWRKKG+ V+ VK+QG CGSCW FST  A+E    I T K++SL+EQ+LVDC  D  N GC GGL   AFE+I    G+  E  YPY
Sbjct:   35 FKSWMSKHRKTYSTEEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPY------PPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPY 207          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.610e-29
Identity = 74/208 (35.58%), Postives = 109/208 (52.40%), Query Frame = 1
Query:  112 IVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS--IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD--------QNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +V G D ++ EL +E       +R+   +   +  DE   R +VFK N+    +   +D   +  + KF+D+T  EF  TY G + K  R      G        + +  +P   DWR  G+V  VK+QG CGSCW+FS   A+EG +++ T KL  LSEQ+ VDCD +         + GCNGGLM  AF +++K GG+ +E  YPY
Sbjct:   31 VVPGGDDNDLELNAESHFLSFVQRFGKSY---KDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLR-KSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPY 234          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.684e-29
Identity = 72/197 (36.55%), Postives = 110/197 (55.84%), Query Frame = 1
Query:  169 DLYERW-RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFSRK 741
            DL+ +W R ++      D++H+R N++++NV H+ + N         Y L LN+F DMT  EF + Y     +   +      +G        ++P  +DWR+ G VT VKDQG CGSCWAFST   +EG         +S SEQ+LVDC     N GC+GGLME A++++ K+ G+ TE+ YPY A+     ++++
Sbjct:   19 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILS----HGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYL-KQFGLETESSYPYTAVEGQCRYNKQ 209          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.044e-28
Identity = 71/189 (37.57%), Postives = 107/189 (56.61%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHTVSRSLDEKH-KRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            L  EE   +L++ +++ +    S  ++H +RF  FK     +   N  +  YKL +N +AD++N EF +T    K+    +   T  +       + SIPS+VDWR +  VT VKDQG CGSCW F +  ++EG N +   +LVSLSEQ+LVDC     +QGC GG    AF+++ + G + TE+ YPY
Sbjct:  215 LAKEEQASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEF-NTLVKPKVARPSV---TGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPY 399          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.044e-28
Identity = 72/188 (38.30%), Postives = 104/188 (55.32%), Query Frame = 1
Query:  187 RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ--NQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFSRKF 744
            ++   V R + EK+ +F V   N+ H    +     Y L +N   DMT+ E  S  +  ++         + N T+       +P SVDWR+KG VT VK QG CG+CWAFS + A+E    + T KLVSLS Q LVDC T++  N+GCNGG M  AF++I    G++++A YPY AM +   +  K+
Sbjct:   42 KNEEAVRRLIWEKNLKF-VMLHNLEHSMGMHS----YDLGMNHLGDMTSEEVMSLMSSLRVPSQ-----WQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKY 219          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.044e-28
Identity = 74/203 (36.45%), Postives = 111/203 (54.68%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHH--TVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            L  EE L   +E W+  H    +  +DE  +R  ++++N+    +H  + +     Y+L +N   DMT+ E      G ++   R F           G+V   P S+D+RKKG VT VK+QGQCGSCWAFS+  A+EG     T KL++LS Q LVDC   +N GC GG M  AF+++++ GG+++E  YPY    E   ++
Sbjct:   16 LSPEETLDTQWELWKKTHGKQYNSKVDEISRRL-IWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSFSNDTLYTPEWEGRV---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC-VSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYN 213          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.363e-28
Identity = 79/191 (41.36%), Postives = 104/191 (54.45%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSI--PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-DTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFSR-----KFPSSVN 759
            S++E  +RF +F  N+  +   N+    YKL +N+F D+T  EF     G+          T+GN      K+T++  P + DWRK G V+ VK QG+CGSCW FST  A+E        K +SLSEQ+LVDC     N GCNGGL   AFE+IK  GG++TE  YPY        FS+     K  SSVN
Sbjct:   70 SVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGAS---QNCSATTKGNL-----KLTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVKVISSVN 252          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.363e-28
Identity = 70/199 (35.18%), Postives = 109/199 (54.77%), Query Frame = 1
Query:  166 WDLYERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ---NQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFSRK 741
            WDL+++  +H    +  +E+  R  ++++N+    +H  + +     Y++ +N   DMTN E +      +I        +    TF      ++P +VDWR+KG VT VK QG CG+CWAFS + A+EG   + T KL+SLS Q LVDC  ++   N+GC GG M  AF++I   GG+  +A YPY A  E   ++ K
Sbjct:   36 WDLWKK--THEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISCRMGALRISRQ-----SPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYNSK 227          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.363e-28
Identity = 75/203 (36.95%), Postives = 110/203 (54.19%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            L  EE L   +E W+  H    +  +DE  +R  ++++N+  +   N         Y+L +N   DMT+ E      G +I   R +           G+V   P S+D+RKKG VT VK+QGQCGSCWAFS+  A+EG     T KL++LS Q LVDC T +N GC GG M  AF+++++ GG+++E  YPY    E   ++
Sbjct:   16 LSPEEMLDTQWELWKKTHQKQYNSKVDEISRRL-IWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSYSNDTLYTPEWEGRV---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVT-ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYN 213          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28
Identity = 57/90 (63.33%), Postives = 69/90 (76.67%), Query Frame = 1
Query:  436 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +P S+DWR+ G+V  VK+QG CGSCWAFST+AAVEGIN I+T  L+SLSEQ+LVDC T  N GC GG M  AF+FI   GG+N+E  YPY
Sbjct:    3 LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDC-TTANHGCRGGWMNPAFQFIVNNGGINSEETYPY 91          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATH_HUMAN9.439e-3040.78Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CYSP1_MAIZE1.610e-2935.58Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CATLL_FASHE4.684e-2936.55Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CFAD_DICDI1.044e-2837.57Counting factor associated protein D OS=Dictyostel... [more]
CATS_HUMAN1.044e-2838.30Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATK_RAT1.044e-2836.45Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CYSP3_SOLLC1.363e-2841.36Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATS_MOUSE1.363e-2835.18Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATK_MOUSE1.363e-2836.95Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CPGP2_ZINOF2.325e-2863.33Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
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