FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28
Identity = 74/192 (38.54%), Postives = 102/192 (53.12%), Query Frame = 1
Query:  166 WDLYERWRS-------HHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ--NQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAM 714
            W+L+++  S            R + EK+ +F V   N+ H    +     Y L +N   DMT  E  S     ++         + N T+       +P SVDWR+KG VT VK QG CG+CWAFS + A+E    + T KLVSLS Q LVDC T++  N+GCNGG M  AF++I    G+++EA YPY AM
Sbjct:   28 WNLWKKTYSKQYKEENEEVARRLIWEKNLKF-VMLHNLEHSMGMHS----YDLGMNHLGDMTGEEVISLMGSLRVPSQ-----WQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAM 209          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28
Identity = 70/179 (39.11%), Postives = 97/179 (54.19%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGS-VTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            ++ W   H    S +E + R   F  N+  ++  N  +  +K+ LN+F+DM+  E    Y  S+ ++    +     GT  Y      P S+DWRKKG+ VT VK+QG CGSCW FST  A+E    I T KL  L+EQ+LVDC  +  N GC GGL   AFE+I+   G+  E  YPY
Sbjct:   35 FQSWMVQHQKKYSSEEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSEPQNCSATKSNYLRGTGPY------PPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPY 207          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.036e-28
Identity = 67/177 (37.85%), Postives = 99/177 (55.93%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDK-PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFSR 738
            S  E+  R  +F+QN+  + + N  +    K  + +FADMT+ E+      + +      + T G+   +      +P   DWR+K +VT VK+QG CGSCWAFS    +EG+  + T +L   SEQEL+DCDT  +  CNGGLM+ A++ IK  GG+  EA+YPY A      F+R
Sbjct:  321 STAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKER---TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDT-TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNR 493          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.966e-28
Identity = 57/93 (61.29%), Postives = 72/93 (77.42%), Query Frame = 1
Query:  436 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAM 714
            +PS VDWR KG+V ++K+Q QCGSCWAFS +AAVE IN I T +L+SLSEQELVDCDT  + GCNGG M  AF++I   GG++T+  YPY A+
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT-ASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAV 92          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.966e-28
Identity = 74/196 (37.76%), Postives = 110/196 (56.12%), Query Frame = 1
Query:  166 WDLYER-WRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            WDL+++ +R  +  +  +DE  +R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+        +R N T       S  P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC   +N GC GG M  AF++++K  G+++E  YPY    E   ++
Sbjct:   27 WDLWKKTYRKQY--NSKVDELSRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYN 214          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 55/93 (59.14%), Postives = 70/93 (75.27%), Query Frame = 1
Query:  436 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAM 714
            +P  +DWRKKG+VT VK+QG CGSCWAFST++ VE IN I T  L+SLSEQELVDCD  +N GC GG    A+++I   GG++T+A YPY A+
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCD-KKNHGCLGGAFVFAYQYIINNGGIDTQANYPYKAV 92          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 75/192 (39.06%), Postives = 109/192 (56.77%), Query Frame = 1
Query:  166 WDLYERWRSHHTVSRSLDEKHK---RFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ--NQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAM 714
            WDL+++     T  +   EK++   R  ++++N+    +H  + +     Y+L +N   DMT+ E  S  +  ++      Q  R N T+       +P S+DWR+KG VT VK QG CGSCWAFS + A+E    + T KLVSLS Q LVDC T +  N+GCNGG M  AF++I    G+++EA YPY AM
Sbjct:   28 WDLWKK-----TYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPS----QWPR-NVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAM 209          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 58/92 (63.04%), Postives = 70/92 (76.09%), Query Frame = 1
Query:  439 PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            P SVDWR+KG VT VKDQGQCGSCWAFST  A+EG +     KLVSLSEQ LVDC   + NQGCNGGLM+ AF++++  GG+++E  YPY A
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTA 93          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.764e-28
Identity = 76/204 (37.25%), Postives = 111/204 (54.41%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            L  EE L   +E W+  H    +  +DE  +R  ++++N+ ++   N         Y+L +N   DMTN E      G K+        +R N T ++       P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC   +N GC GG M  AF++++K  G+++E  YPY    E   ++
Sbjct:   16 LYPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASH----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYN 213          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.764e-28
Identity = 76/204 (37.25%), Postives = 111/204 (54.41%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            L  EE L   +E W+  H    +  +DE  +R  ++++N+ ++   N         Y+L +N   DMTN E      G K+        +R N T ++       P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC   +N GC GG M  AF++++K  G+++E  YPY    E   ++
Sbjct:   16 LYPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASH----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYN 213          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATS_CANFA2.325e-2838.54Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATH_BOVIN2.325e-2839.11Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CPR1_DROME3.036e-2837.85Putative cysteine proteinase CG12163 OS=Drosophila... [more]
ERVB_TABDI3.966e-2861.29Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATK_CANFA3.966e-2837.76Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
ERVC_TABDI5.179e-2859.14Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATS_BOVIN5.179e-2839.06Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL1_CHICK5.179e-2863.04Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CATK_MACMU6.764e-2837.25Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA6.764e-2837.25Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
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