FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14473 contig Ccv1_Contig14473:1..766. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.764e-28
Identity = 77/209 (36.84%), Postives = 115/209 (55.02%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK--------PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            E EL+++   WDL++R     T+ +++  +  R NV + ++    + ++  +         ++L +N   DMT+ E   T  G ++   R     R NGT      +S  P++VDWR+KG VT VKDQGQCGSCWAFS++ A+EG     T KL+SLS Q LV C    N GC GG M  AFE+++   G+++E  YPY    E   +S
Sbjct:   24 EPELDAQ---WDLWKR-----TIQKAVQRQGGR-NVPEVDLGEEPEVHRCPQRGARLGKHSFQLAMNYLGDMTSEEVVRTMTGLRVPRSR----PRPNGTLYVPDWSSRAPAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC-VSNNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESCMYS 218          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 6.764e-28
Identity = 75/203 (36.95%), Postives = 112/203 (55.17%), Query Frame = 1
Query:  145 LESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            L  EE L   +E W+ ++     S  ++  R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+   R    +R N T ++       P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC   +N GC GG M  AF++++K  G+++E  YPY    E+  ++
Sbjct:   16 LYPEEILDTQWELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASR----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYN 213          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.834e-28
Identity = 73/169 (43.20%), Postives = 96/169 (56.80%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNKMDKPYKLK-LNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGK-VTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMME 720
            E   RFN+FK N++         +   +  +  ++D+T  EFA T+  +      +   +R N     GK V +IP + DWR+KG+VT VK+QG CGSCWAFST   VE      T KL+SLSEQ+LVDCD   + GCNGGL   A+E I K GG+  E  YPY A  E
Sbjct:   35 EDEIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTASW----VVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD-GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNE 198          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.834e-28
Identity = 75/212 (35.38%), Postives = 117/212 (55.19%), Query Frame = 1
Query:  115 VEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            V  F  H +E+   +  W+L+++  S    S+ +DE  +R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+   R    +  N T ++       P S+D+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC   +N GC GG M  AF+++++  G+++E  YPY    E   ++
Sbjct:   11 VVSFALHPEEILDTQ--WELWKKTYSKQYNSK-VDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSR----SHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYN 213          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.154e-27
Identity = 70/201 (34.83%), Postives = 110/201 (54.73%), Query Frame = 1
Query:  169 DLYERWRSHHTVSRSLD-EKHKRFNVFKQNVMHVHQTN--KMDKPYKL-KLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFSRKFPSSVN 759
            D +E +  ++  + + D EK+KR+++FK N+  ++  N    D P    K+NKF+D++  E  + + G  I               +       P   DWR++  VT++K+QG CG+CWAF+T+A+VE    +  N+L+ LSEQ+L+DCD+  + GCNGGL+  AFE I + GGV TE  YP+          R  P  V+
Sbjct:   54 DYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPER---VSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDS-VDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVS 250          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.154e-27
Identity = 75/204 (36.76%), Postives = 110/204 (53.92%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFS 735
            L  EE L   +E W+  H    +  +DE  +R  ++++N+ ++   N         Y+L +N   DMT+ E      G K+        +R N T    +     P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC   +N GC GG M  AF++++K  G+++E  YPY    E   ++
Sbjct:   16 LYPEEILDTHWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP----LSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYN 213          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.507e-27
Identity = 69/185 (37.30%), Postives = 109/185 (58.92%), Query Frame = 1
Query:  172 LYERW-RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGK----VTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFI--KKKGGVNTEAKYPY 705
            L+E + R++     +L E+ +R   F++N+  + +    +   +  + KF D++  EFA+ Y          F   + +    Y K    ++++P +VDWR+KG+VT VKDQG CGSCWAFS +  +EG  ++  ++LVSLSEQ+LV CD D N GC+GGLM  AF+++     G ++TE  YPY
Sbjct:   37 LFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAA----YFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPY 216          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.507e-27
Identity = 69/185 (37.30%), Postives = 109/185 (58.92%), Query Frame = 1
Query:  172 LYERW-RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGK----VTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFI--KKKGGVNTEAKYPY 705
            L+E + R++     +L E+ +R   F++N+  + +    +   +  + KF D++  EFA+ Y          F   + +    Y K    ++++P +VDWR+KG+VT VKDQG CGSCWAFS +  +EG  ++  ++LVSLSEQ+LV CD D N GC+GGLM  AF+++     G ++TE  YPY
Sbjct:   37 LFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAA----YFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPY 216          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.968e-27
Identity = 62/167 (37.13%), Postives = 96/167 (57.49%), Query Frame = 1
Query:  223 KHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAG-SKIKHHRMFQGTRGNGTFMYGKVT-----SIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            K+ RF +FKQN+  +++ NK++      +NKF+D++ +E  + Y G +  K   M + T      ++          +P + DWR    +T+VKDQG CGSCWA + +  +E +  I  N L++LSEQ+L+DCD+  N  C+GGLM  AFE +   GG+  E  YPY
Sbjct:   49 KNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDS-ANMACDGGLMHTAFEQLMNAGGLMEEIDYPY 214          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.968e-27
Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 1
Query:  166 WDLYERW-------RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVNTEAKYPYXAMMEHVTFSRKF 744
            W+L+++        ++   V R + EK+ +F V   N+ H    +     Y L +N   DMT+ E  S  +  ++ +       + N T+       +P SVDWR+KG VT VK QG CG+CWAFS + A+E    + T KLVSLS Q LVDC     N+GCNGG M  AF++I    G+++EA YPY A  +   +  K+
Sbjct:   28 WNLWKKTYGKQYKEKNEEAVRRLIWEKNLKF-VMLHNLEHSMGMHS----YDLGMNHLGDMTSEEVMSLMSSLRVPNQ-----WQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQYDSKY 218          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATK_CHICK6.764e-2836.84Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CATK_BOVIN6.764e-2836.95Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATL_SCHMA8.834e-2843.20Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATK_RABIT8.834e-2835.38Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATV_NPVLD1.154e-2734.83Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATK_HUMAN1.154e-2736.76Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
LMCPB_LEIME1.507e-2737.30Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI1.507e-2737.30Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATV_NPVAH1.968e-2737.13Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATS_SAIBB1.968e-2736.32Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
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