FC931115

Overview
NameFC931115
Unique NameFC931115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_PSEE4 (Phosphoserine aminotransferase OS=Pseudomonas entomophila (strain L48) GN=serC PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.873e-36
Identity = 77/161 (47.83%), Postives = 104/161 (64.60%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +WR  G+ VMEMSHR  ++ +I EKAE DLR LL++P  Y VLFLQGGA+ QFA +PLNL   N   DY+ TG W  KA +EA++F +  V  S KA  Y  IP  +  + + +A YLH  +NETI G++F   P A +    LV DMSS+  S+P+DV++
Sbjct:   29 DWRGKGLSVMEMSHRSDDYVAIAEKAEQDLRDLLSVPSNYKVLFLQGGASQQFAEIPLNLLPENGVADYVETGIWSKKAIEEARRFGSVNVAASAKAYDYLAIPGQNEWKLSKNAAYLHYASNETIGGLQFDWVPEAGDVP--LVVDMSSDILSRPIDVSQ 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_MOUSE (Phosphoserine aminotransferase OS=Mus musculus GN=Psat1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.873e-36
Identity = 78/163 (47.85%), Postives = 105/163 (64.42%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            ++R  G+ V+EMSHR  +F  II   E+ +R LL +P  Y V+F+QGG + QF+AVPLNL         DY+VTG+W  KA +EA+KF    ++   K   YTKIP+      NPDA Y++ CANET+HGVEF   P  K +  +LV DMSSNF S+PVDV++
Sbjct:   31 DYRGLGISVLEMSHRSSDFAKIIGNTENLVRELLAVPNNYKVIFVQGGGSGQFSAVPLNLIGLKAGRSADYVVTGAWSAKAAEEAKKFGTVNIV-HPKLGSYTKIPDPSTWNLNPDASYVYFCANETVHGVEFDFVPDVKGA--VLVCDMSSNFLSRPVDVSK 190          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_HUMAN (Phosphoserine aminotransferase OS=Homo sapiens GN=PSAT1 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 5.058e-36
Identity = 79/163 (48.47%), Postives = 104/163 (63.80%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +++  G+ V+EMSHR  +F  II   E+ +R LL +P  Y V+FLQGG   QF+AVPLNL         DY+VTG+W  KA +EA+KF    ++   K   YTKIP+      NPDA Y++ CANET+HGVEF   P  K +  +LV DMSSNF SKPVDV++
Sbjct:   31 DYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIV-HPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGA--VLVCDMSSNFLSKPVDVSK 190          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_MARMS (Phosphoserine aminotransferase OS=Marinomonas sp. (strain MWYL1) GN=serC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 6.606e-36
Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  +G+ VMEMSHR  EF SI+  A++ L  L+NI  +Y +LF+QGGA+T F+ +P NL    +   ++ TG+W  KA KEA+K+    V+ S KA+ YT +P+F  LE +  A YLHIC NETI G+EF + P        +VAD+SS   S+ VDV++
Sbjct:   28 DWHGAGVSVMEMSHRSSEFMSILASAKARLSRLMNISDDYEILFVQGGASTLFSQIPANLANGFESACFLDTGAWSSKAIKEAKKYTKVNVVGSSKAQNYTTVPDFSTLELDESAAYLHICPNETIGGLEFADLPETNLP---IVADLSSTILSRKVDVSK 185          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_DICDI (Probable phosphoserine aminotransferase OS=Dictyostelium discoideum GN=serC PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 8.627e-36
Identity = 74/164 (45.12%), Postives = 106/164 (64.63%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK-EYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            N++  G  +ME+SHRGKEF+ +I + +S+L+ LL+I  +Y +LFLQGGA++ FA +P+NLC     D VD+IVTGSW  +A  + + FC    +   + EK+  +    + + +PDAKY+H C NETIHG+E     P    S  I V DMSSNF SKP+DV +
Sbjct:   34 NFQGCGKSIMEVSHRGKEFEGVINETKSNLKKLLSISDDYDILFLQGGASSLFAGIPMNLCENGVEDIVDFIVTGSWSKQASNDGKYFCKVNKVVDMEKEKFLTVTEPQSWKFSPDAKYVHYCDNETIHGIEMPISTPDHLPSNLIKVCDMSSNFLSKPIDVNK 197          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_THIDA (Phosphoserine aminotransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=serC PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.127e-35
Identity = 77/161 (47.83%), Postives = 101/161 (62.73%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRGKEF  I  +AE+DLR L+ IP  Y VLFLQGGA++QFA VP+NL       DY+ TG W  KA KEA+K+    V+ S +   ++  P  D  + +P+A Y+H   NETI GVE    P A +    + ADMSS   S+P+DV++
Sbjct:   27 DWHGSGMSVMEMSHRGKEFMGIAAEAEADLRELMAIPANYKVLFLQGGASSQFAMVPMNLLRGKASADYLNTGEWSKKAIKEAKKYAAVNVVASSEDRNFSYAPTQDRWKLDPNAAYVHYTPNETIGGVEIFWTPEAGDVP--IAADMSSTILSRPIDVSK 185          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_PSEFS (Phosphoserine aminotransferase OS=Pseudomonas fluorescens (strain SBW25) GN=serC PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.127e-35
Identity = 79/165 (47.88%), Postives = 100/165 (60.61%), Query Frame = 1
Query:   10 GGAFNWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            G   +W   G+ VMEMSHR  EF SI  KAE DLR LL IP  Y VLFLQGGA+ QFA +PLNL   +   DYI TG WG KA +EA ++ +  V  + K   Y  IP  +  + + DA Y+H  ANETI G+EF   P   +    LV DMSS+  S+P+DV++
Sbjct:   25 GELLDWHGKGLSVMEMSHRSDEFVSIATKAEQDLRDLLGIPSHYKVLFLQGGASQQFAQIPLNLLPEDGTADYIDTGIWGQKAIEEASRYGHVNVAGTAKPYDYFAIPGQNEWKLSKDAAYVHYVANETIGGLEFDWVPEVGDVP--LVCDMSSDILSRPIDVSK 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BURPP (Phosphoserine aminotransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=serC PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.472e-35
Identity = 78/162 (48.15%), Postives = 104/162 (64.20%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGK-AEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W+ SGM VMEMSHRGKEF SI E+A  DLR LL +P  + +LFLQGG   + A VP+NL       D++VTGSW  K+FKEAQK+    +  SG+ AE +T+ P     + + D  Y+H+C NETIHGVE  E P   +    LVAD SS+  S+P+D+ +
Sbjct:   27 DWQGSGMSVMEMSHRGKEFMSIHEEALVDLRDLLEVPASHRILFLQGGGLGENAIVPMNLMGAKPRADFVVTGSWSQKSFKEAQKYGTVHLAASGQTAEGFTRAPARSEWQLSDDPAYVHLCTNETIHGVETFEIPDLGDIP--LVADASSHILSRPMDIAK 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BACHK (Phosphoserine aminotransferase OS=Bacillus thuringiensis subsp. konkukian GN=serC PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.472e-35
Identity = 78/161 (48.45%), Postives = 101/161 (62.73%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            N+  +GM +MEMSHR   F+SII++A S LR L+NIP EY VLFLQGGA+ QF+ +PLNL        Y++TGSW  KA +EA+K    QVI S + EK+T IP  D L  N    Y+HI  N TI G ++ + P        LVADMSSN  S+  DV++
Sbjct:   28 NYNGTGMSIMEMSHRSSYFQSIIDEAGSLLRELMNIPDEYEVLFLQGGASLQFSMIPLNLMNTYKKAGYVLTGSWSKKALQEAEKVGEVQVIASSENEKFTTIPKLDGLLGNEKLDYVHITTNNTIEGTKYVDIPHVDKVP--LVADMSSNILSERYDVSK 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BURCM (Phosphoserine aminotransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=serC PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.922e-35
Identity = 77/162 (47.53%), Postives = 104/162 (64.20%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGK-AEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRGKEF SI E A +DLR LL++P  + +LFLQGG   + A VP+NL       D++VTGSW  K+F EA+K+  P +  SGK A+ +T+ P     + + D  Y+H+C NETI GVE  E P   +    LVAD+SS+  S+P+DV +
Sbjct:   27 DWHGSGMSVMEMSHRGKEFMSIHEAALADLRELLDVPASHRILFLQGGGIAENAIVPMNLLGSRQTADFVVTGSWSQKSFNEAKKYGTPHLAASGKTADGFTRAPARAEWQLSDDPAYVHLCTNETIDGVETFEIPDLGDIP--LVADVSSHILSRPMDVAK 186          
The following BLAST results are available for this feature:
BLAST of FC931115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_PSEE43.873e-3647.83Phosphoserine aminotransferase OS=Pseudomonas ento... [more]
SERC_MOUSE3.873e-3647.85Phosphoserine aminotransferase OS=Mus musculus GN=... [more]
SERC_HUMAN5.058e-3648.47Phosphoserine aminotransferase OS=Homo sapiens GN=... [more]
SERC_MARMS6.606e-3644.72Phosphoserine aminotransferase OS=Marinomonas sp. ... [more]
SERC_DICDI8.627e-3645.12Probable phosphoserine aminotransferase OS=Dictyos... [more]
SERC_THIDA1.127e-3547.83Phosphoserine aminotransferase OS=Thiobacillus den... [more]
SERC_PSEFS1.127e-3547.88Phosphoserine aminotransferase OS=Pseudomonas fluo... [more]
SERC_BURPP1.472e-3548.15Phosphoserine aminotransferase OS=Burkholderia phy... [more]
SERC_BACHK1.472e-3548.45Phosphoserine aminotransferase OS=Bacillus thuring... [more]
SERC_BURCM1.922e-3547.53Phosphoserine aminotransferase OS=Burkholderia amb... [more]

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Properties
Property NameValue
Genbank descriptionC34101F03EF PostHarvP1 Citrus clementina cDNA clone C34101F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931115 ID=FC931115; Name=FC931115; organism=Citrus clementina; type=EST; length=505bp
ATCTGGCCGGGAGGAGCTTTCAACTGGCGCGCATCTGGCATGGGCGTGAT
GGAAATGAGCCATAGAGGTAAAGAATTCAAGTCCATTATTGAAAAAGCTG
AATCGGATCTTAGAGCCCTCTTGAATATTCCCCAAGAATATTCTGTTTTG
TTCTTGCAAGGCGGCGCTACGACACAGTTCGCCGCCGTTCCATTGAATTT
GTGTACACCTAATGACCCGGTCGATTATATCGTCACCGGGTCGTGGGGTG
ACAAAGCTTTTAAAGAAGCGCAAAAATTTTGCAACCCACAAGTGATTTGG
TCTGGAAAAGCTGAAAAGTACACAAAGATTCCAAATTTTGATGCTTTGGA
GCAAAACCCAGATGCCAAGTATTTGCATATTTGTGCTAATGAGACAATTC
ATGGTGTTGAGTTTAAGGAGTATCCGTCGGCTAAGAATTCAACTGGTATT
CTAGTCGCTGATATGTCTTCCAATTTTTGTTCAAAGCCTGTTGATGTTAC
CAGGT
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