FC931115

Overview
NameFC931115
Unique NameFC931115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_RALPJ (Phosphoserine aminotransferase OS=Ralstonia pickettii (strain 12J) GN=serC PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.510e-35
Identity = 73/163 (44.79%), Postives = 108/163 (66.26%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLN----LCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTG-ILVADMSSNFCSKPVD 495
            +W  SGM VMEMSHRG+EF++I+  A SDLR LL +P  Y +LFLQGGA  + A VPLN    L       DY+VTG+W  K+ +EA+K+    +  + + E++ KIP+  + + + DA Y+H+C NETI GVE++E P    + G ++V+D+SS+  S+P+D
Sbjct:   39 SWHGSGMSVMEMSHRGREFENILAAAFSDLRQLLAVPDNYEILFLQGGAIAENAIVPLNLMRRLSADAPKADYVVTGTWSVKSQQEARKYGEVNIAATSETERFHKIPDVSSWKLSSDAAYVHLCTNETIVGVEYQETPDVGQAHGRVVVSDVSSHILSRPID 201          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_HERAR (Phosphoserine aminotransferase OS=Herminiimonas arsenicoxydans GN=serC PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.510e-35
Identity = 74/164 (45.12%), Postives = 102/164 (62.20%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPND---PVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NWR  G+ VMEMSHRG+EF  I+   + DLR+L++IP  Y +L +QGGA  + A VP+NL         +D++ TG W  K+ +EA+K+ N  V  S + + +T +P  D  +  PDA Y+H+C NETI GVEF   P   N    LVADMSSN  S+ +DV+R
Sbjct:   28 NWRGCGLSVMEMSHRGREFTEILATTKDDLRSLMSIPDNYKILLMQGGAIAENAIVPMNLVGMKPQPATIDFVNTGHWSIKSIEEARKYANVNVAASSEDQNFTYVPARDTWKLTPDAAYVHVCTNETIGGVEFDFTPDVGNVP--LVADMSSNILSREIDVSR 189          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BURA4 (Phosphoserine aminotransferase OS=Burkholderia ambifaria (strain MC40-6) GN=serC PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.510e-35
Identity = 77/162 (47.53%), Postives = 104/162 (64.20%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGK-AEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRGKEF SI E A +DLR LL++P  + +LFLQGG   + A VP+NL       D++VTGSW  K+F EA+K+  P +  SGK A+ +T+ P     + + D  Y+H+C NETI GVE  E P   +    LVAD+SS+  S+P+DV +
Sbjct:   27 DWHGSGMSVMEMSHRGKEFMSIHEAALADLRELLDVPASHRILFLQGGGIAENAIVPMNLLGSRKTADFVVTGSWSQKSFNEAKKYGTPHLAASGKTADGFTRAPARAEWQLSDDPAYVHLCTNETIDGVETFEIPDLGDVP--LVADVSSHILSRPMDVAK 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BACCR (Phosphoserine aminotransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=serC PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.278e-35
Identity = 76/161 (47.20%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            N+  +GM +MEMSHR   F+SIIE+A + LR L++IP EY VLFLQGGA+ QF+ +PLNL        Y++TGSW  KA +EA+K    QVI S + EK+T IP  D L  +    Y+HI  N TI G ++ + P  +     LVADMSSN  S+  DV++
Sbjct:   28 NYNGTGMSIMEMSHRSSYFQSIIEEASNLLRELMSIPDEYEVLFLQGGASLQFSMIPLNLMNTYKKAGYVLTGSWSKKALQEAEKVGEVQVIASSEQEKFTTIPKLDGLLSDEKLDYVHITTNNTIEGTKYVDIPHVEKVP--LVADMSSNILSERYDVSK 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_PSESM (Phosphoserine aminotransferase OS=Pseudomonas syringae pv. tomato GN=serC PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.592e-35
Identity = 80/161 (49.69%), Postives = 96/161 (59.63%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W   G+ VMEMSHR  EF SI  KAE DLR LL+IP  Y VLFLQGGA+ QFA + LNL   N   DYI TG W  KA  EA ++    V  S KA  Y  IP  +    + DA Y+H   NETI G+EF   P   +    LVADMSS+  S+PVD++R
Sbjct:   29 DWHGKGLSVMEMSHRSDEFVSIANKAEQDLRDLLSIPSNYKVLFLQGGASQQFAQIALNLLPENGKADYIDTGIWSQKAIDEASRYGTINVAASAKAYDYFAIPGQNEWTLSRDAAYVHYAPNETIGGLEFNWIPETGDVP--LVADMSSDILSRPVDISR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_PSEPK (Phosphoserine aminotransferase OS=Pseudomonas putida (strain KT2440) GN=serC PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.592e-35
Identity = 75/161 (46.58%), Postives = 100/161 (62.11%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +WR  G+ VMEMSHR  ++ +I EKAE DLR LL++P  Y VLFLQGGA+ QFA +PLNL   N   DYI TG W  KA +EA++F N  V  + K   Y  IP  +      +A Y+H  +NETI G++F   P   +    LV DMSS+  S+P+DV++
Sbjct:   29 DWRGKGLSVMEMSHRSDDYVAIAEKAEQDLRDLLSVPSNYKVLFLQGGASQQFAEIPLNLLPENGTADYIETGIWSKKAIEEARRFGNVNVAATAKPYDYLAIPGQNEWNLTKNAAYVHYASNETIGGLQFDWVPQTGDVP--LVVDMSSDILSRPIDVSQ 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_JANMA (Phosphoserine aminotransferase OS=Janthinobacterium sp. (strain Marseille) GN=serC PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.592e-35
Identity = 73/164 (44.51%), Postives = 101/164 (61.59%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC---TPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NWR SG+ VMEMSHRG+EF  I+   ++DLR+LL+IP  Y +L +QGGA  + A VP+NL         +D++ TG W  K  +EA K+    +  S + + +T +P  D  +  PDA Y+HIC NETI GVEF   P   N    LVADMSSN  S+ +D+++
Sbjct:   28 NWRGSGLSVMEMSHRGREFTEILATTKADLRSLLSIPDNYKILLMQGGAIAENAIVPMNLVGSKAQPATIDFVNTGHWSSKTIEEAHKYAKVNIAASSEDKDFTYVPARDTWKLTPDAAYVHICTNETIGGVEFDFTPDVGNVP--LVADMSSNILSREIDISK 189          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BURS3 (Phosphoserine aminotransferase OS=Burkholderia sp. (strain 383) GN=serC PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.592e-35
Identity = 77/162 (47.53%), Postives = 102/162 (62.96%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEK-YTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRGKEF SI E A +DLR LL +P  + +LFLQGG   + A VP+NL       D++VTGSW  K+F EA+K+  P +  +GK E  YT+ P     + + D  Y+H+C NETI GVE  E P   +    LVAD+SS+  S+P+DV +
Sbjct:   27 DWHGSGMSVMEMSHRGKEFMSIHEAALTDLRDLLGVPASHRILFLQGGGIAENAIVPMNLLGSRKTADFVVTGSWSQKSFTEAKKYGTPHLAATGKTEDGYTRAPVRAEWQLSDDPAYVHLCTNETIDGVETFEIPDLGDVP--LVADVSSHILSRPMDVAK 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_GEOKA (Phosphoserine aminotransferase OS=Geobacillus kaustophilus GN=serC PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.303e-35
Identity = 74/161 (45.96%), Postives = 107/161 (66.46%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            N++ +GM VME+SHR KE++++   A+  L+ LLN+P  Y +LFLQGGA+ QF+ VP+NL T      Y++TG+W +KA KEAQK     V+ S K   YT IP  D ++   +A Y+HI +N TI G ++KE+P   N+   LVADMSS+  S+P DV++
Sbjct:   28 NFQNTGMSVMELSHRSKEYEAVHHAAKERLKRLLNVPDGYDILFLQGGASLQFSMVPMNLLTEGKIGCYVLTGAWSEKALKEAQKIGLTTVVASSKEANYTYIPPLDDVQWPKNAAYVHITSNNTIFGTQWKEFP---NTPVDLVADMSSDILSRPFDVSQ 185          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BACCZ (Phosphoserine aminotransferase OS=Bacillus cereus (strain ZK / E33L) GN=serC PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.303e-35
Identity = 76/161 (47.20%), Postives = 101/161 (62.73%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            N+  +GM +MEMSHR   F+SII++A + LR L+NIP EY VLFLQGGA+ QF+ +PLNL        Y++TGSW  KA +EA+K    QVI S + EK+T IP  D L  +    Y+HI  N TI G ++ + P        LVADMSSN  S+  DV++
Sbjct:   28 NYNGTGMSIMEMSHRSSYFQSIIDEASNLLRELMNIPNEYDVLFLQGGASLQFSMIPLNLMNTYKKAGYVLTGSWSKKALQEAEKVGEVQVIASSENEKFTTIPKLDGLLGDEKLDYVHITTNNTIEGTKYVDIPRVDKVP--LVADMSSNILSERYDVSK 186          
The following BLAST results are available for this feature:
BLAST of FC931115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_RALPJ2.510e-3544.79Phosphoserine aminotransferase OS=Ralstonia picket... [more]
SERC_HERAR2.510e-3545.12Phosphoserine aminotransferase OS=Herminiimonas ar... [more]
SERC_BURA42.510e-3547.53Phosphoserine aminotransferase OS=Burkholderia amb... [more]
SERC_BACCR3.278e-3547.20Phosphoserine aminotransferase OS=Bacillus cereus ... [more]
SERC_PSESM5.592e-3549.69Phosphoserine aminotransferase OS=Pseudomonas syri... [more]
SERC_PSEPK5.592e-3546.58Phosphoserine aminotransferase OS=Pseudomonas puti... [more]
SERC_JANMA5.592e-3544.51Phosphoserine aminotransferase OS=Janthinobacteriu... [more]
SERC_BURS35.592e-3547.53Phosphoserine aminotransferase OS=Burkholderia sp.... [more]
SERC_GEOKA7.303e-3545.96Phosphoserine aminotransferase OS=Geobacillus kaus... [more]
SERC_BACCZ7.303e-3547.20Phosphoserine aminotransferase OS=Bacillus cereus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34101F03EF PostHarvP1 Citrus clementina cDNA clone C34101F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931115 ID=FC931115; Name=FC931115; organism=Citrus clementina; type=EST; length=505bp
ATCTGGCCGGGAGGAGCTTTCAACTGGCGCGCATCTGGCATGGGCGTGAT
GGAAATGAGCCATAGAGGTAAAGAATTCAAGTCCATTATTGAAAAAGCTG
AATCGGATCTTAGAGCCCTCTTGAATATTCCCCAAGAATATTCTGTTTTG
TTCTTGCAAGGCGGCGCTACGACACAGTTCGCCGCCGTTCCATTGAATTT
GTGTACACCTAATGACCCGGTCGATTATATCGTCACCGGGTCGTGGGGTG
ACAAAGCTTTTAAAGAAGCGCAAAAATTTTGCAACCCACAAGTGATTTGG
TCTGGAAAAGCTGAAAAGTACACAAAGATTCCAAATTTTGATGCTTTGGA
GCAAAACCCAGATGCCAAGTATTTGCATATTTGTGCTAATGAGACAATTC
ATGGTGTTGAGTTTAAGGAGTATCCGTCGGCTAAGAATTCAACTGGTATT
CTAGTCGCTGATATGTCTTCCAATTTTTGTTCAAAGCCTGTTGATGTTAC
CAGGT
back to top