FC931115

Overview
NameFC931115
Unique NameFC931115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_ACIAD (Phosphoserine aminotransferase OS=Acinetobacter sp. (strain ADP1) GN=serC PE=3 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 7.303e-35
Identity = 73/162 (45.06%), Postives = 106/162 (65.43%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKA-EKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W+  G+ +MEMSHR K++ ++ EKAE+DLR L+NIP+ Y VLFLQGGA+ QF+A+P+NL   N   DYI TG W +KA KEAQ++ +  VI +G + +    I N      + DA Y+H   NETI G++F + P        LV+D+SS+  S P+DV++
Sbjct:   27 DWQGKGLSIMEMSHRSKDYVAVAEKAEADLRKLMNIPENYQVLFLQGGASLQFSAIPMNLLGKNSKADYIHTGIWSEKALKEAQRYGDINVIEAGTSIDGKLAIKNQSEWNLSQDAAYVHYAENETIGGIQFADIPDVNVP---LVSDLSSSILSAPLDVSK 185          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BACC1 (Phosphoserine aminotransferase OS=Bacillus cereus (strain ATCC 10987) GN=serC PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 9.539e-35
Identity = 77/161 (47.83%), Postives = 101/161 (62.73%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            N+  +GM +MEMSHR   F+SII++A S LR L+NIP EY VLFLQGGA+ QF+ +PLN+        YI+TGSW  KA +EA+K    QVI S + EK+T IP  D L  +    Y+HI  N TI G ++ + P        LVADMSSN  S+  DV++
Sbjct:   28 NYNGTGMSIMEMSHRSSYFQSIIDEAGSLLRELMNIPDEYEVLFLQGGASLQFSMIPLNVMNTYKKAGYILTGSWSKKAMQEAEKVGEVQVIASSENEKFTTIPRLDGLLGDEKLDYVHITTNNTIEGTKYVDIPHVDKVP--LVADMSSNILSERYDVSK 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_PSEU2 (Phosphoserine aminotransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=serC PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.246e-34
Identity = 79/161 (49.07%), Postives = 97/161 (60.25%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W   G+ VMEMSHR  EF SI  KAE DLR LL+IP  Y VLFLQGGA+ QFA + LNL   N   DYI TG W  KA  EA ++    V  S KA  Y  IP  +  + + DA Y+H   NETI G+EF   P   +    LVADMSS+  S+P+D++R
Sbjct:   29 DWHGKGLSVMEMSHRSDEFVSIATKAEQDLRDLLSIPSNYKVLFLQGGASQQFAQIALNLLPENGKADYIDTGIWSQKAIDEASRYGAINVAASAKAYDYFAIPGQNEWKLSKDAAYVHYAPNETIGGLEFNWIPETGDVP--LVADMSSDILSRPLDISR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_VIBVU (Phosphoserine aminotransferase OS=Vibrio vulnificus GN=serC PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.627e-34
Identity = 79/163 (48.47%), Postives = 99/163 (60.74%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQ--NPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW+  G  VME+SHR KEF ++ E++E DLR LLNIP  Y VLF QGGA  QFAAVPLNL        YI  G W + A +EA+K+C P V +  KAEK  K     A E   +PDA Y+H C NETI G+E  + P        +VADMSS   S+ +DV++
Sbjct:   32 NWQGLGTSVMEISHRSKEFIAVAEQSEQDLRDLLNIPDNYKVLFCQGGARAQFAAVPLNLLGDATTATYIDAGYWAESAVEEAKKYCQPDV-FVAKAEKEGKQAVLPASEWQIHPDAAYVHFCPNETIDGIEINDLPVTDKP---IVADMSSTILSREIDVSK 190          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_RHOFD (Phosphoserine aminotransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=serC PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.627e-34
Identity = 74/169 (43.79%), Postives = 104/169 (61.54%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDP------VDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYP--SAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRG+EF SI E+A  DLR LL +P  + +LF+QGG   + A VPLNL     P       D++VTG W  K+ +EA+K+C   +  S +++ +T +P   + + +  A Y+HIC+NETIHGVE+   P   A  S   LV D SS+  S+P+D +R
Sbjct:   28 DWHGSGMSVMEMSHRGREFVSIYEQAHLDLRELLAVPDSFKILFMQGGGLAENAIVPLNLSARVSPAGAAGSADFVVTGGWSLKSQQEARKYCTVNIAASNESDGHTTLPGPASWQLSHGASYVHICSNETIHGVEYHTLPDLQALGSEAALVVDCSSHVASRPIDWSR 196          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_XYLFT (Phosphoserine aminotransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=serC PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.125e-34
Identity = 72/160 (45.00%), Postives = 98/160 (61.25%), Query Frame = 1
Query:   25 WRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            W A G  VME+SHR  EF ++ +  ESDLR LL +P +Y+VLFL GGATTQ A +PLN   P    DY+VTG W   A K+A  + N  V+  G+ + +  IPN      + DA Y+H+ ANETIHGVEF++ P   +    L AD SS+  +  +DV++
Sbjct:   30 WNAVGASVMEISHRSAEFIALAKGIESDLRCLLGVPDDYAVLFLSGGATTQQALLPLNFAAPGQTADYVVTGHWSKTALKQASPYVNINVVADGERDGFQDIPNRAGWRLSKDAAYVHMTANETIHGVEFRQTPDVGDVP--LFADFSSSIAADLIDVSK 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_VIBVY (Phosphoserine aminotransferase OS=Vibrio vulnificus (strain YJ016) GN=serC PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.125e-34
Identity = 79/163 (48.47%), Postives = 99/163 (60.74%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQ--NPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW+  G  VME+SHR KEF ++ E++E DLR LLNIP  Y VLF QGGA  QFAAVPLNL        YI  G W + A +EA+K+C P V +  KAEK  K     A E   +PDA Y+H C NETI G+E  + P        +VADMSS   S+ +DV++
Sbjct:   32 NWQGLGTSVMEISHRSKEFIAVAEQSEQDLRDLLNIPDNYKVLFCQGGARAQFAAVPLNLLGDATTATYIDAGYWAESAVEEAKKYCQPDV-FVAKAEKDGKQAVLPASEWQIHPDAAYVHFCPNETIDGIEINDLPVTDKP---IVADMSSTILSREIDVSK 190          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BACAA (Phosphoserine aminotransferase OS=Bacillus anthracis (strain A0248) GN=serC PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.125e-34
Identity = 76/161 (47.20%), Postives = 100/161 (62.11%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            N+  +GM +MEMSHR   F+SII++A S LR L+NIP EY VLFLQGGA+ QF+ +PLNL        Y++TGSW  KA +EA+K    QVI S + EK+T IP  D L  +    Y+HI  N TI G ++ + P        LVADMS N  S+  DV++
Sbjct:   29 NYNGTGMSIMEMSHRSSYFQSIIDEAGSLLRELMNIPDEYEVLFLQGGASLQFSMIPLNLMNTYKKAGYVLTGSWSKKALQEAEKVGEVQVIASSENEKFTTIPKLDGLLGDEKLDYVHITTNNTIEGTKYVDIPHVDKVP--LVADMSPNILSERYDVSK 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BURP8 (Phosphoserine aminotransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=serC PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.775e-34
Identity = 76/162 (46.91%), Postives = 102/162 (62.96%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGK-AEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRGKEF +I E+A +DLR LL +P  + +LFLQGG   + A VP+NL       D++VTGSW  K+FKEAQK+    +  SG+ A  +T +P       + D  Y+H+C NETIHGVE  E P   +    LVAD SS+  S+P+D+ +
Sbjct:   27 DWGGSGMSVMEMSHRGKEFMTIHEEALTDLRELLQVPSSHHILFLQGGGLGENAIVPMNLMGRKARADFVVTGSWSQKSFKEAQKYGTVHLAASGETANGFTHVPARAEWSLSDDPAYVHLCTNETIHGVETFEIPDLGDIP--LVADASSHILSRPMDIAK 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_PSEAE (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa GN=serC PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.625e-34
Identity = 76/161 (47.20%), Postives = 99/161 (61.49%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +WR  G+ VMEMSHR  ++ +I  KAE DLR LL+IP +Y VLFLQGGA+ QFA +PLNL   +   DYI TG W  KA +EA+++    V  S K   Y  IP  +      DA Y+H  +NETI G+EF   P   +    LV DMSS+  S+P+DV+R
Sbjct:   29 DWRGKGLSVMEMSHRSDDYVAIASKAEQDLRDLLDIPSDYKVLFLQGGASQQFAEIPLNLLPEDGVADYIDTGIWSKKAIEEARRYGTVNVAASAKEYDYFAIPGQNEWTLTKDAAYVHYASNETIGGLEFDWIPETGDVP--LVTDMSSDILSRPLDVSR 187          
The following BLAST results are available for this feature:
BLAST of FC931115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_ACIAD7.303e-3545.06Phosphoserine aminotransferase OS=Acinetobacter sp... [more]
SERC_BACC19.539e-3547.83Phosphoserine aminotransferase OS=Bacillus cereus ... [more]
SERC_PSEU21.246e-3449.07Phosphoserine aminotransferase OS=Pseudomonas syri... [more]
SERC_VIBVU1.627e-3448.47Phosphoserine aminotransferase OS=Vibrio vulnificu... [more]
SERC_RHOFD1.627e-3443.79Phosphoserine aminotransferase OS=Rhodoferax ferri... [more]
SERC_XYLFT2.125e-3445.00Phosphoserine aminotransferase OS=Xylella fastidio... [more]
SERC_VIBVY2.125e-3448.47Phosphoserine aminotransferase OS=Vibrio vulnificu... [more]
SERC_BACAA2.125e-3447.20Phosphoserine aminotransferase OS=Bacillus anthrac... [more]
SERC_BURP82.775e-3446.91Phosphoserine aminotransferase OS=Burkholderia phy... [more]
SERC_PSEAE3.625e-3447.20Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]

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Properties
Property NameValue
Genbank descriptionC34101F03EF PostHarvP1 Citrus clementina cDNA clone C34101F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931115 ID=FC931115; Name=FC931115; organism=Citrus clementina; type=EST; length=505bp
ATCTGGCCGGGAGGAGCTTTCAACTGGCGCGCATCTGGCATGGGCGTGAT
GGAAATGAGCCATAGAGGTAAAGAATTCAAGTCCATTATTGAAAAAGCTG
AATCGGATCTTAGAGCCCTCTTGAATATTCCCCAAGAATATTCTGTTTTG
TTCTTGCAAGGCGGCGCTACGACACAGTTCGCCGCCGTTCCATTGAATTT
GTGTACACCTAATGACCCGGTCGATTATATCGTCACCGGGTCGTGGGGTG
ACAAAGCTTTTAAAGAAGCGCAAAAATTTTGCAACCCACAAGTGATTTGG
TCTGGAAAAGCTGAAAAGTACACAAAGATTCCAAATTTTGATGCTTTGGA
GCAAAACCCAGATGCCAAGTATTTGCATATTTGTGCTAATGAGACAATTC
ATGGTGTTGAGTTTAAGGAGTATCCGTCGGCTAAGAATTCAACTGGTATT
CTAGTCGCTGATATGTCTTCCAATTTTTGTTCAAAGCCTGTTGATGTTAC
CAGGT
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