FC931115

Overview
NameFC931115
Unique NameFC931115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_PSEAB (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=serC PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.625e-34
Identity = 76/161 (47.20%), Postives = 99/161 (61.49%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +WR  G+ VMEMSHR  ++ +I  KAE DLR LL+IP +Y VLFLQGGA+ QFA +PLNL   +   DYI TG W  KA +EA+++    V  S K   Y  IP  +      DA Y+H  +NETI G+EF   P   +    LV DMSS+  S+P+DV+R
Sbjct:   29 DWRGKGLSVMEMSHRSDDYVAIASKAEQDLRDLLDIPSDYKVLFLQGGASQQFAEIPLNLLPEDGVADYIDTGIWSKKAIEEARRYGTVNVAASAKEYDYFAIPGQNEWTLTKDAAYVHYASNETIGGLEFDWIPETGDVP--LVTDMSSDILSRPLDVSR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_PSEA8 (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=serC PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.625e-34
Identity = 76/161 (47.20%), Postives = 99/161 (61.49%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +WR  G+ VMEMSHR  ++ +I  KAE DLR LL+IP +Y VLFLQGGA+ QFA +PLNL   +   DYI TG W  KA +EA+++    V  S K   Y  IP  +      DA Y+H  +NETI G+EF   P   +    LV DMSS+  S+P+DV+R
Sbjct:   29 DWRGKGLSVMEMSHRSDDYVAIASKAEQDLRDLLDIPSDYKVLFLQGGASQQFAEIPLNLLPEDGVADYIDTGIWSKKAIEEARRYGTVNVAASAKEYDYFAIPGQNEWTLTKDAAYVHYASNETIGGLEFDWIPETGDVP--LVTDMSSDILSRPLDVSR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_PSEA7 (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa (strain PA7) GN=serC PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.734e-34
Identity = 76/161 (47.20%), Postives = 98/161 (60.87%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +WR  G+ VMEMSHR  ++ +I  KAE DLR LL+IP +Y VLFLQGGA+ QFA +PLNL   +   DYI TG W  KA +EA+++    V  S K   Y  IP  +      DA Y+H  +NETI G+EF   P        LV DMSS+  S+P+DV+R
Sbjct:   29 DWRGKGLSVMEMSHRSDDYVAIASKAEHDLRDLLDIPSDYKVLFLQGGASQQFAEIPLNLLPEDGVADYIDTGIWSKKAIEEARRYGRVNVAASAKEYDYFAIPGQNEWNLTKDAAYVHYASNETIGGLEFDWIPETGGVP--LVTDMSSDILSRPLDVSR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_ACIF5 (Phosphoserine aminotransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=serC PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.734e-34
Identity = 77/161 (47.83%), Postives = 97/161 (60.25%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRG EF  I  +AE DLR LL+IP  Y +LFLQGGAT QFA VPLNL   +    Y+ TG W  KA  EA++F   ++  S +    + +P     + +PD  Y+HI  NETI GVEF   P   +    LV+D SS+  SKP DV+R
Sbjct:   29 DWHGSGMSVMEMSHRGPEFMKIAAEAEQDLRDLLDIPANYKILFLQGGATLQFAMVPLNLMRGHGKASYVQTGIWSKKAIAEARRFTAVEIAASNEDRHASYVPMQADWQVSPDTAYVHITGNETIGGVEFDFIPDLGDIP--LVSDASSHILSKPTDVSR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_ACIF2 (Phosphoserine aminotransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=serC PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.734e-34
Identity = 77/161 (47.83%), Postives = 97/161 (60.25%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRG EF  I  +AE DLR LL+IP  Y +LFLQGGAT QFA VPLNL   +    Y+ TG W  KA  EA++F   ++  S +    + +P     + +PD  Y+HI  NETI GVEF   P   +    LV+D SS+  SKP DV+R
Sbjct:   29 DWHGSGMSVMEMSHRGPEFMKIAAEAEQDLRDLLDIPANYKILFLQGGATLQFAMVPLNLMRGHGKASYVQTGIWSKKAIAEARRFTAVEIAASNEDRHASYVPMQADWQVSPDTAYVHITGNETIGGVEFDFIPDLGDIP--LVSDASSHILSKPTDVSR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_LEPBP (Phosphoserine aminotransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=serC PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 6.183e-34
Identity = 70/160 (43.75%), Postives = 105/160 (65.62%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDV 498
            N+R +GM VMEMSHR K F+SI++++ SDLR LLN+P  Y+V++  GGAT QF+A+P N  +  D  D+ +TG W  KAF+EA+KF  N + I++G   KY ++P       N  AKY++I +N TI+G  +K +P  K +   L+ADM+S   S+ + +
Sbjct:   32 NFRGTGMSVMEMSHREKHFQSILDESISDLRELLNLPSRYAVVYFPGGATLQFSAIPFNYLSSGDSCDFALTGVWAKKAFEEAKKFYPNVKSIFNGADSKYMELPTITDESVNDGAKYMYITSNNTIYGTRYKTFPKLKKAP--LIADMTSELLSRKLPI 189          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_LEPBA (Phosphoserine aminotransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=serC PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 6.183e-34
Identity = 70/160 (43.75%), Postives = 105/160 (65.62%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDV 498
            N+R +GM VMEMSHR K F+SI++++ SDLR LLN+P  Y+V++  GGAT QF+A+P N  +  D  D+ +TG W  KAF+EA+KF  N + I++G   KY ++P       N  AKY++I +N TI+G  +K +P  K +   L+ADM+S   S+ + +
Sbjct:   32 NFRGTGMSVMEMSHREKHFQSILDESISDLRELLNLPSRYAVVYFPGGATLQFSAIPFNYLSSGDSCDFALTGVWAKKAFEEAKKFYPNVKSIFNGADSKYMELPTITDESVNDGAKYMYITSNNTIYGTRYKTFPKLKKAP--LIADMTSELLSRKLPI 189          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_AZOVD (Phosphoserine aminotransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=serC PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 6.183e-34
Identity = 75/161 (46.58%), Postives = 97/161 (60.25%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W+  G+ VMEMSHR  E+ +I  KAE DLR LL IP  Y VLFLQGGA+ QFA +PLNL       DY+ TG W  K+ +EA++F    V  S KA  Y  +P  +    + DA YLH  +NETI G++F   P        LV DMSS+  S+P+DV+R
Sbjct:   29 DWQGKGLSVMEMSHRSDEYVAIAAKAEQDLRDLLGIPSNYKVLFLQGGASQQFAEIPLNLLPEGGVADYVDTGIWSRKSMEEARRFGTVNVAASAKAYDYFALPGQNEWRLSKDAAYLHYASNETIGGLQFDWVPETGEVP--LVVDMSSDILSRPIDVSR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_ERWT9 (Phosphoserine aminotransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=serC PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.055e-33
Identity = 77/162 (47.53%), Postives = 94/162 (58.02%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKA-EKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NWR  G  VME+SHR KEF  + E+AE D R LL IP  Y VLF  GGA  QFAAVPLNL   +   DY+  G W   A KEAQK+C P VI +         I   ++ E + DA Y+H C NETI G+   E P   + T  +VAD+SS   S P+DV+R
Sbjct:   28 NWRGLGTSVMEISHRSKEFIQVAEEAEKDFRDLLKIPSNYKVLFCHGGARGQFAAVPLNLLGQHGKADYVDGGYWAASAIKEAQKYCTPNVIDAKTTLNGLRAISPMNSWELSDDAAYVHFCPNETIDGIAIHETPDFGDKT--VVADLSSTILSTPIDVSR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_XANCP (Phosphoserine aminotransferase OS=Xanthomonas campestris pv. campestris GN=serC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.377e-33
Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 1
Query:   25 WRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            W   G  ++E+SHR  +F ++   AE+DLR LL+IP +Y+VLF  GGATT  A +PLN   P   VDY+V+G WG  A K+A  + + +V   G+   Y  IP   +   +P A Y+HI ANETIHGVEF++ P     T  L AD SS+  S+P+D+ R
Sbjct:   29 WNGVGASIVEISHRSADFMAVAAAAEADLRTLLSIPDDYAVLFTSGGATTIQALLPLNFAAPGQAVDYVVSGHWGKTAIKQATPYVDVRVAADGQPGGYVDIPPVASWTLSPHAAYVHITANETIHGVEFRDTPDV--GTLPLFADFSSSIASEPLDIRR 186          
The following BLAST results are available for this feature:
BLAST of FC931115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_PSEAB3.625e-3447.20Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_PSEA83.625e-3447.20Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_PSEA74.734e-3447.20Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_ACIF54.734e-3447.83Phosphoserine aminotransferase OS=Acidithiobacillu... [more]
SERC_ACIF24.734e-3447.83Phosphoserine aminotransferase OS=Acidithiobacillu... [more]
SERC_LEPBP6.183e-3443.75Phosphoserine aminotransferase OS=Leptospira bifle... [more]
SERC_LEPBA6.183e-3443.75Phosphoserine aminotransferase OS=Leptospira bifle... [more]
SERC_AZOVD6.183e-3446.58Phosphoserine aminotransferase OS=Azotobacter vine... [more]
SERC_ERWT91.055e-3347.53Phosphoserine aminotransferase OS=Erwinia tasmanie... [more]
SERC_XANCP1.377e-3344.38Phosphoserine aminotransferase OS=Xanthomonas camp... [more]

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Properties
Property NameValue
Genbank descriptionC34101F03EF PostHarvP1 Citrus clementina cDNA clone C34101F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931115 ID=FC931115; Name=FC931115; organism=Citrus clementina; type=EST; length=505bp
ATCTGGCCGGGAGGAGCTTTCAACTGGCGCGCATCTGGCATGGGCGTGAT
GGAAATGAGCCATAGAGGTAAAGAATTCAAGTCCATTATTGAAAAAGCTG
AATCGGATCTTAGAGCCCTCTTGAATATTCCCCAAGAATATTCTGTTTTG
TTCTTGCAAGGCGGCGCTACGACACAGTTCGCCGCCGTTCCATTGAATTT
GTGTACACCTAATGACCCGGTCGATTATATCGTCACCGGGTCGTGGGGTG
ACAAAGCTTTTAAAGAAGCGCAAAAATTTTGCAACCCACAAGTGATTTGG
TCTGGAAAAGCTGAAAAGTACACAAAGATTCCAAATTTTGATGCTTTGGA
GCAAAACCCAGATGCCAAGTATTTGCATATTTGTGCTAATGAGACAATTC
ATGGTGTTGAGTTTAAGGAGTATCCGTCGGCTAAGAATTCAACTGGTATT
CTAGTCGCTGATATGTCTTCCAATTTTTGTTCAAAGCCTGTTGATGTTAC
CAGGT
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