FC931115

Overview
NameFC931115
Unique NameFC931115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_PSEMY (Phosphoserine aminotransferase OS=Pseudomonas mendocina (strain ymp) GN=serC PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.068e-33
Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W+  G+ VMEMSHR  E+ +I  +AE DLR LL +P +Y VLFLQGGA+ QFA +PLNL   +   DY+ TG W  KA +EA+++    V  S K+  Y  IP  +  + + +A Y+H C+NETI G++F   P   +    LV DMSS+  S+P+DV++
Sbjct:   29 DWQGKGLSVMEMSHRSDEYVAIASQAEQDLRDLLAVPNDYKVLFLQGGASQQFAEIPLNLLPEDGVADYVETGIWSKKAIEEARRYGAINVAASAKSYDYFAIPGQNDWQLSKNAAYVHYCSNETIGGLQFDWVPQTGDIP--LVVDMSSDILSRPIDVSQ 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_ACIBT (Phosphoserine aminotransferase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=serC PE=3 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 3.068e-33
Identity = 72/162 (44.44%), Postives = 103/162 (63.58%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG-KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W+  G+ +MEMSHR  ++ ++ EKAE+DLR L+NIP+ Y VLFLQGGA+ QF+A+PLNL   N+  DYI TG W +KA KEA+++ +  V+ +G K +    I        + DA Y+H   NETI G++F   P  K     LV D SS+  S P+DV++
Sbjct:   27 DWQGKGLSIMEMSHRSADYVAVAEKAEADLRKLMNIPENYKVLFLQGGASLQFSAIPLNLLGKNNKADYIHTGIWSEKALKEAKRYGDINVVEAGIKVDGKFAISEQSEWNLSDDAAYVHYADNETIGGLQFAGVPDVK---APLVCDFSSSILSAPLDVSK 185          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_ACIBC (Phosphoserine aminotransferase OS=Acinetobacter baumannii (strain ACICU) GN=serC PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.068e-33
Identity = 72/162 (44.44%), Postives = 103/162 (63.58%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG-KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W+  G+ +MEMSHR  ++ ++ EKAE+DLR L+NIP+ Y VLFLQGGA+ QF+A+PLNL   N+  DYI TG W +KA KEA+++ +  V+ +G K +    I        + DA Y+H   NETI G++F   P  K     LV D SS+  S P+DV++
Sbjct:   27 DWQGKGLSIMEMSHRSADYVAVAEKAEADLRKLMNIPENYKVLFLQGGASLQFSAIPLNLLGKNNKADYIHTGIWSEKALKEAKRYGDINVVEAGIKVDGKFAISEQSEWNLSDDAAYVHYADNETIGGLQFAGVPDVK---APLVCDFSSSILSAPLDVSK 185          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_ACIB5 (Phosphoserine aminotransferase OS=Acinetobacter baumannii (strain AB0057) GN=serC PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.068e-33
Identity = 72/162 (44.44%), Postives = 103/162 (63.58%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG-KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W+  G+ +MEMSHR  ++ ++ EKAE+DLR L+NIP+ Y VLFLQGGA+ QF+A+PLNL   N+  DYI TG W +KA KEA+++ +  V+ +G K +    I        + DA Y+H   NETI G++F   P  K     LV D SS+  S P+DV++
Sbjct:   27 DWQGKGLSIMEMSHRSADYVAVAEKAEADLRKLMNIPENYKVLFLQGGASLQFSAIPLNLLGKNNKADYIHTGIWSEKALKEAKRYGDINVVEAGIKVDGKFAISEQSEWNLSDDAAYVHYADNETIGGLQFAGVPDVK---APLVCDFSSSILSAPLDVSK 185          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_ACIB3 (Phosphoserine aminotransferase OS=Acinetobacter baumannii (strain AB307-0294) GN=serC PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.068e-33
Identity = 72/162 (44.44%), Postives = 103/162 (63.58%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG-KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W+  G+ +MEMSHR  ++ ++ EKAE+DLR L+NIP+ Y VLFLQGGA+ QF+A+PLNL   N+  DYI TG W +KA KEA+++ +  V+ +G K +    I        + DA Y+H   NETI G++F   P  K     LV D SS+  S P+DV++
Sbjct:   27 DWQGKGLSIMEMSHRSADYVAVAEKAEADLRKLMNIPENYKVLFLQGGASLQFSAIPLNLLGKNNKADYIHTGIWSEKALKEAKRYGDINVVEAGIKVDGKFAISEQSEWNLSDDAAYVHYADNETIGGLQFAGVPDVK---APLVCDFSSSILSAPLDVSK 185          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_YERPS (Phosphoserine aminotransferase OS=Yersinia pseudotuberculosis GN=serC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.008e-33
Identity = 76/162 (46.91%), Postives = 94/162 (58.02%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-WSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW   G  VME+SHR KEF  + E++E DLR LL IP  Y VLF  GGA  QFAAVPLNL   ++  DYI  G W   A KEAQK+C P VI  +      T I      + + +A Y+H C NETI GV   E P   N   ++VAD SS   S+P+D++R
Sbjct:   28 NWHGLGTSVMEISHRSKEFMQVAEESEKDLRDLLQIPANYKVLFCHGGARAQFAAVPLNLLGDSNSADYIDGGYWAHSAVKEAQKYCTPHVIDVTTHDNGLTGIQPMKQWKLSDNAAYVHYCPNETIDGVAINEQPDFGNK--VVVADYSSAILSRPIDISR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_YERPB (Phosphoserine aminotransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=serC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.008e-33
Identity = 76/162 (46.91%), Postives = 94/162 (58.02%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-WSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW   G  VME+SHR KEF  + E++E DLR LL IP  Y VLF  GGA  QFAAVPLNL   ++  DYI  G W   A KEAQK+C P VI  +      T I      + + +A Y+H C NETI GV   E P   N   ++VAD SS   S+P+D++R
Sbjct:   28 NWHGLGTSVMEISHRSKEFMQVAEESEKDLRDLLQIPANYKVLFCHGGARAQFAAVPLNLLGDSNSADYIDGGYWAHSAVKEAQKYCTPHVIDVTTHDNGLTGIQPMKQWKLSDNAAYVHYCPNETIDGVAINEQPDFGNK--VVVADYSSAILSRPIDISR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_XYLFA (Phosphoserine aminotransferase OS=Xylella fastidiosa GN=serC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.008e-33
Identity = 71/160 (44.38%), Postives = 96/160 (60.00%), Query Frame = 1
Query:   25 WRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            W A G  VME+SHR  EF  + +  ESDLR LL +P +Y+VLFL GGATTQ A +PLN   P    DY+VTG W   A K+A  + N  V+  G+   +  IP+      + DA Y+H+ ANETIHGVEF++ P   +    L AD SS+  +  +DV++
Sbjct:   30 WNAVGASVMEISHRTVEFMELAKGIESDLRCLLGVPDDYAVLFLSGGATTQQALLPLNFAAPGQTADYVVTGHWSKTALKQASPYVNINVVADGERGGFQHIPSRAGWRLSKDAAYVHMTANETIHGVEFRQTPDVGDVP--LFADFSSSIAADLIDVSK 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_XANAC (Phosphoserine aminotransferase OS=Xanthomonas axonopodis pv. citri GN=serC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.008e-33
Identity = 67/160 (41.88%), Postives = 100/160 (62.50%), Query Frame = 1
Query:   25 WRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            W   G  ++E+SHR  +F ++   AE+DLR+LL+IP +Y+VLF  GGATT  A +PLN   P    DY++TG WG  A K+A  + + ++    +A+ +  IP   +   +P + Y+HI ANETIHGVEF++ P     T  L AD SS+  S+P+D++R
Sbjct:   29 WNGVGASIVEISHRSADFMAVAAAAEADLRSLLSIPDDYAVLFTAGGATTIQALLPLNFAAPGQAADYVITGHWGKTAIKQAATYVDARIAADAQADGFVDIPAAASWTLSPHSAYVHITANETIHGVEFRDTPDV--GTLPLFADFSSSIASEPLDISR 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_YERE8 (Phosphoserine aminotransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=serC PE=3 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 6.836e-33
Identity = 76/162 (46.91%), Postives = 94/162 (58.02%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-WSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW   G  VME+SHR KEF  + E+AE DLR L+ IP  Y VLF  GGA  QFAAVPLNL   +   DYI  G W   A KEAQK+C P VI  +      T I      + + +A Y+H C NETI G+   E P   N   ++VAD SS+  S+P+DV+R
Sbjct:   28 NWHGLGTSVMEISHRSKEFMQVAEEAEKDLRDLMQIPANYKVLFCHGGARAQFAAVPLNLLGDSRSADYIDGGYWAHSAVKEAQKYCTPNVIDVTTHDNGVTGIAPMKQWKLSDNAAYVHYCPNETIDGLAINEEPDFGNK--VVVADYSSSILSRPIDVSR 187          
The following BLAST results are available for this feature:
BLAST of FC931115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_PSEMY3.068e-3344.10Phosphoserine aminotransferase OS=Pseudomonas mend... [more]
SERC_ACIBT3.068e-3344.44Phosphoserine aminotransferase OS=Acinetobacter ba... [more]
SERC_ACIBC3.068e-3344.44Phosphoserine aminotransferase OS=Acinetobacter ba... [more]
SERC_ACIB53.068e-3344.44Phosphoserine aminotransferase OS=Acinetobacter ba... [more]
SERC_ACIB33.068e-3344.44Phosphoserine aminotransferase OS=Acinetobacter ba... [more]
SERC_YERPS4.008e-3346.91Phosphoserine aminotransferase OS=Yersinia pseudot... [more]
SERC_YERPB4.008e-3346.91Phosphoserine aminotransferase OS=Yersinia pseudot... [more]
SERC_XYLFA4.008e-3344.38Phosphoserine aminotransferase OS=Xylella fastidio... [more]
SERC_XANAC4.008e-3341.88Phosphoserine aminotransferase OS=Xanthomonas axon... [more]
SERC_YERE86.836e-3346.91Phosphoserine aminotransferase OS=Yersinia enteroc... [more]

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Properties
Property NameValue
Genbank descriptionC34101F03EF PostHarvP1 Citrus clementina cDNA clone C34101F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931115 ID=FC931115; Name=FC931115; organism=Citrus clementina; type=EST; length=505bp
ATCTGGCCGGGAGGAGCTTTCAACTGGCGCGCATCTGGCATGGGCGTGAT
GGAAATGAGCCATAGAGGTAAAGAATTCAAGTCCATTATTGAAAAAGCTG
AATCGGATCTTAGAGCCCTCTTGAATATTCCCCAAGAATATTCTGTTTTG
TTCTTGCAAGGCGGCGCTACGACACAGTTCGCCGCCGTTCCATTGAATTT
GTGTACACCTAATGACCCGGTCGATTATATCGTCACCGGGTCGTGGGGTG
ACAAAGCTTTTAAAGAAGCGCAAAAATTTTGCAACCCACAAGTGATTTGG
TCTGGAAAAGCTGAAAAGTACACAAAGATTCCAAATTTTGATGCTTTGGA
GCAAAACCCAGATGCCAAGTATTTGCATATTTGTGCTAATGAGACAATTC
ATGGTGTTGAGTTTAAGGAGTATCCGTCGGCTAAGAATTCAACTGGTATT
CTAGTCGCTGATATGTCTTCCAATTTTTGTTCAAAGCCTGTTGATGTTAC
CAGGT
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