FC931117

Overview
NameFC931117
Unique NameFC931117
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12725 contig Ccv1_Contig12725:169..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931117 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 4.927e-99
Identity = 174/210 (82.86%), Postives = 193/210 (91.90%), Query Frame = 3
Query:   84 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 713
            MEGKEEDVRVGAN++ E QPIGT+AQ+   KDY EPPPAP FEPGELSSWSF+RAGIAEF+ATFLFLYITVLTVMGV +S + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA++Y++MQCLGAICGA VVKGFQ  QY+ LGGGAN ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKRNARDSHVP
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVP 208          
BLAST of FC931117 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 4.927e-99
Identity = 174/210 (82.86%), Postives = 193/210 (91.90%), Query Frame = 3
Query:   84 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 713
            MEGKEEDVRVGAN++ E QPIGT+AQ+   KDY EPPPAP FEPGELSSWSF+RAGIAEF+ATFLFLYITVLTVMGV +S + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA++Y++MQCLGAICGA VVKGFQ  QY+ LGGGAN ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKRNARDSHVP
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVP 208          
BLAST of FC931117 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 356.295 bits (913), Expect = 9.292e-98
Identity = 172/210 (81.90%), Postives = 191/210 (90.95%), Query Frame = 3
Query:   84 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 713
            MEGKEEDV VGAN++ E QPIGTAAQT+  KDY EPPPAP FEPGEL SWSFYRAGIAEF+ATFLFLY+TVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FY++MQCLGAICGA VVKGFQ   Y+  GGGAN+++ GY+KG GLGAEIVGTFVLVYTVFSATDAKR+ARDSHVP
Sbjct:    1 MEGKEEDVNVGANKFPERQPIGTAAQTES-KDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVP 209          
BLAST of FC931117 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 347.436 bits (890), Expect = 4.316e-95
Identity = 171/212 (80.66%), Postives = 190/212 (89.62%), Query Frame = 3
Query:   84 MEGKEEDVRVGANRYRESQPIGTAAQTQDV-KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQ-KSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 713
            ME KE+DV +GAN++ E QP+G AAQ+QD  KDY EPPPAPLFEP EL+SWSFYRAGIAEF+ATFLFLYITVLTVMGV +  SKC TVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FYM+MQ LGAICGA VVKGF+ K ++  L GGAN ++ GY+KGDGLGAEIVGTF+LVYTVFSATDAKR+ARDSHVP
Sbjct:    1 MEAKEQDVSLGANKFPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVP 212          
BLAST of FC931117 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.256e-94
Identity = 172/210 (81.90%), Postives = 186/210 (88.57%), Query Frame = 3
Query:   84 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 713
            MEGKEEDVR+GAN++ E   IGTAAQ  D KDY EPPPAPLFEPGEL SWSFYR GIAEFVATFLFLYI++LTVMGVSKS SKC+TVGIQGIAW+FGGMI ALVYCTAGIS GHINPAVTFGLFLARKLSLTRAVFY+IMQCLGAICG  VVKGFQ+  Y   GG  N+++ GY+KGDGLGAEIVGTF+LVYTVFSATDAKR ARDSHVP
Sbjct:    1 MEGKEEDVRLGANKFSERHAIGTAAQGTDDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS-GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVP 209          
BLAST of FC931117 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.368e-93
Identity = 168/207 (81.16%), Postives = 183/207 (88.41%), Query Frame = 3
Query:   93 KEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 713
            +EEDVRVG +R+ E QPIGTAA     +DY+EPP APLFE  ELSSWSFYRAGIAEFVATFLFLY+TVLTVMGVSKS SKC TVGIQGIAWAFGGMIFALVYCTAG+SGGHINPAVTFGL LARKLSLTRAV+Y++MQCLGA+CGA VVK F  + YE  GGGAN +S GY+KGDGLGAE+VGTFVLVYTVFSATDAKR ARDSHVP
Sbjct:   11 EEEDVRVGVDRFPERQPIGTAADDLG-RDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVP 216          
BLAST of FC931117 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 8.463e-75
Identity = 135/193 (69.95%), Postives = 152/193 (78.76%), Query Frame = 3
Query:  135 SQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 713
            S+ +    +T   KDY +PPPAPL + GEL SWSFYRA IAEF+AT LFLY+TV TV+G  K    C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMI QCLGAICG   VK F K+ Y  LGGGAN ++ GYSKG  LGAEI+GTFVLVYTVFSATD KR+ARDSH+P
Sbjct:    2 SKEVSEEGKTHHGKDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIP 194          
BLAST of FC931117 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.216e-74
Identity = 139/188 (73.94%), Postives = 152/188 (80.85%), Query Frame = 3
Query:  174 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 713
            KDYT+PPPAPL +  EL+ WS YRA IAEF+AT LFLYITV TV+G        V+ + + CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+I QCLGAICG  +VKGFQ S Y   GGGAN LS GYSKG GLGAEI+GTFVLVYTVFSATD KRNARDSH+P
Sbjct:   18 KDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIP 205          
BLAST of FC931117 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 6.065e-73
Identity = 133/187 (71.12%), Postives = 148/187 (79.14%), Query Frame = 3
Query:  174 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSK-------SKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 713
            KDY +PPPAPL +P EL+ WS YRA IAEF+AT LFLYITVLT++G  +         ++C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YMI QC GAICGA + KGFQKS Y   GGG N +S GY+KG  LGAEI+GTFVLVYTVFSATD KRNARDSHVP
Sbjct:   17 KDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVP 203          
BLAST of FC931117 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 2.305e-72
Identity = 132/188 (70.21%), Postives = 150/188 (79.79%), Query Frame = 3
Query:  174 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 713
            KDYT+PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S + + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAICG  +VK FQ + ++  GGGAN L+ GYS+G GLGAEI+GTFVLVYTVFSATD KRNARDSHVP
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVP 206          
The following BLAST results are available for this feature:
BLAST of FC931117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
PIP11_VICFA4.927e-9982.86Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH4.927e-9982.86Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP15_ARATH9.292e-9881.90Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP2_PEA4.316e-9580.66Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP11_MAIZE1.256e-9481.90Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP16_MAIZE2.368e-9381.16Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP27_ARATH8.463e-7569.95Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP22_ORYSJ3.216e-7473.94Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP27_MAIZE6.065e-7371.12Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP21_MAIZE2.305e-7270.21Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34101F05EF PostHarvP1 Citrus clementina cDNA clone C34101F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931117 ID=FC931117; Name=FC931117; organism=Citrus clementina; type=EST; length=713bp
GGAGCCCGTTGTGCCATTTATTTATTCAATTCACTCCCAAGAAACTTGAA
CCTATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGA
GGATGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAA
CCGCGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCG
CCGCTCTTCGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGG
CATTGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAA
CAGTGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATC
CAGGGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTG
CACTGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGC
TGTTCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATA
ATGCAGTGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCTTTCA
GAAAAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAG
GCTACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTTGTT
CTTGTTTACACTGTCTTCTCGGCCACTGATGCCAAGCGCAATGCCCGCGA
TTCTCATGTTCCT
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