FC931127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931127 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.702e-62 Identity = 126/187 (67.38%), Postives = 143/187 (76.47%), Query Frame = 1 Query: 43 MEVATVSAPIFG-LRTRMLATPP------RTSPR---TVNCNRNLSTSFISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 573 MEVA +A F LR R A P R+ PR + + +LS F+SP+ GS+SSD G +LR + LNP +F SKP+ V+TMVIPF+ G+A EQPPPDLASYL+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTK GEKLGY+TEAFAIYDVMGYVKPPIFTLCV Sbjct: 1 MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCV 187
BLAST of FC931127 vs. ExPASy Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.137e-24 Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1 Query: 286 PFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDAEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 573 P+ ++ PPPDL S L K RI+YLGM S VTELI+A+ LYL++++ EKPIY YINSTGT+ G+ +GYETEAFAI D M Y+KPP+ T+C+ Sbjct: 11 PYYGDVSYRTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICI 117
BLAST of FC931127 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 54/101 (53.47%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 304 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDAEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 573 A++ PPPDL S L K RIVYLGM S VT+LI+A+ LYLQ++D +KPIY YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+ Sbjct: 15 AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICI 115
BLAST of FC931127 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.009e-22 Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 1 Query: 316 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCV 573 PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE +G E+E FAIYD + +K + T+CV Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCV 204
BLAST of FC931127 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.731e-18 Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 319 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGT-TKGGEKLGYETEAFAIYDVMGYVKPPIFTL 567 PPDL S L RI YLGM VP+VTEL++A+F++L Y++ KPIYLYINS GT + E +G ETEA+AI D + Y K ++T+ Sbjct: 169 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTI 252
BLAST of FC931127 vs. ExPASy Swiss-Prot
Match: CLPP2_GLOVI (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus GN=clpP2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.081e-16 Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 289 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 573 ++ + PPPDL S L RIVYLG V EL++A+ LYL+ ED KPI +YINS G G+ET AFA+YD M +V+ PI T+C+ Sbjct: 16 YSGDYGFRTPPPDLPSLLLNERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVA------GFETSAFAVYDTMRHVRMPIKTICL 104
BLAST of FC931127 vs. ExPASy Swiss-Prot
Match: CLPP_THEPX (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter sp. (strain X514) GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 325 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 573 D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G T FAIYD M Y+KP + TLCV Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GSITAGFAIYDTMQYIKPDVVTLCV 93
BLAST of FC931127 vs. ExPASy Swiss-Prot
Match: CLPP_THEP3 (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 325 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 573 D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G T FAIYD M Y+KP + TLCV Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GSITAGFAIYDTMQYIKPDVVTLCV 93
BLAST of FC931127 vs. ExPASy Swiss-Prot
Match: CLPP_PELCD (ATP-dependent Clp protease proteolytic subunit OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=clpP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 325 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 573 D+ S L K+RI++LG + V LI+A+ L+L+ ED EK I+LYINS G G T AIYD M YV+ P+ TLCV Sbjct: 19 DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPG--------GVVTAGMAIYDTMQYVRCPVSTLCV 93
BLAST of FC931127 vs. ExPASy Swiss-Prot
Match: CLPP_GEOUR (ATP-dependent Clp protease proteolytic subunit OS=Geobacter uraniireducens (strain Rf4) GN=clpP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 325 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 573 D+ S L K+RIV+LG + +++ L++A+ L+L+ ED +K I+LYINS G G T AIYD M Y+K P+ T+CV Sbjct: 18 DIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIHLYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICV 92 The following BLAST results are available for this feature:
BLAST of FC931127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931127 ID=FC931127; Name=FC931127; organism=Citrus clementina; type=EST; length=624bpback to top |