FC931128

Overview
NameFC931128
Unique NameFC931128
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_NITOC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metE PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 8.461e-31
Identity = 70/165 (42.42%), Postives = 104/165 (63.03%), Query Frame = 3
Query:   15 RWQDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQE 503
            R  D+L ++ SCSLLH+ +DL  E+ LD+E+KSWLAFA QK+ EV  L +AL   +D      + +AAAQASR+ S R+    ++     +     RR      R   Q+++L LP+ PTTTIGSFPQT ++R+ RR++KA +I+E EY   ++ EI + ++ QE
Sbjct:  314 RLDDRLWIAPSCSLLHSPMDLALESALDEELKSWLAFAVQKIEEVATLKRALVEGRDVVAQALADSAAAQASRRQSERIYRPEIRARMTEVNEDMTRRRHKYPVRAQVQREELKLPLYPTTTIGSFPQTPDIRKARRDFKAGRIAEPEYRRQMEAEIARAIQAQE 478          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_XYLFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M12) GN=metE PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.105e-30
Identity = 73/164 (44.51%), Postives = 100/164 (60.98%), Query Frame = 3
Query:   21 QDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD-EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            +D L ++ SCSLLH  VDL  E  LD ++++WLAFA QK+ E+  LA AL  + + E   +    A  +R+ SP+V    V +  AAL     RR T    R  AQQ  LNLP  PTTTIGSFPQT+E+R  R ++K+ K+SE +Y A +K E  + V+ QEE+
Sbjct:  317 KDHLWLAPSCSLLHVPVDLEQEKNLDADVRNWLAFAKQKLSELRVLADALDNKPEAETALTQTRQALEARRQSPKVHRPDVAQRLAALTPDTTRRNTAYPQRSQAQQHTLNLPAYPTTTIGSFPQTLEVREARAQFKSGKLSESDYEAFLKAETERCVRTQEEI 480          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_RUTMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=metE PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.105e-30
Identity = 73/165 (44.24%), Postives = 108/165 (65.45%), Query Frame = 3
Query:   21 QDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKAL-AGQKD-EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            Q++L ++ SCSLLH  VDL +E +L+D+IKSWL FA QK+ E++ LA+AL  GQ       + N  A  S+K SP V N +V++  A +      R ++  +R   Q +K NLP+ PTTTIGSFPQT+E+R+ R +YK  K+S E+Y+ +++ EI   V++QE L
Sbjct:  316 QNRLWLAPSCSLLHVPVDLDSEQELNDDIKSWLGFAVQKLEELSLLAQALNQGQASVTKEIANNIDAINSKKYSPLVHNAKVKERIAKVNDELGNRQSDYKSRTKLQSEKFNLPLYPTTTIGSFPQTLEIRQARHDYKLGKLSAEQYMQTMRSEIRYCVQVQEHL 480          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_CHRSD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metE PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.105e-30
Identity = 73/168 (43.45%), Postives = 104/168 (61.90%), Query Frame = 3
Query:   15 RWQDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQ---KDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            R  ++L +S SCSLLH  VDL  E  LD E+KSWLAFA QK+ E+  LA  L G+   +D     A  +A  +R+ SPR+    V +  AA+   D  RA+  + R  AQ + L+LP+ PTTTIGSFPQT ++R  RR +K+ ++S ++Y A +++EI   V+ QE L
Sbjct:  314 RLGERLWISASCSLLHVPVDLDAETDLDAELKSWLAFARQKLDEIVTLAHLLDGRATPEDTARLEAATSALDARRQSPRIHKPAVGERLAAVSADDAERASPYATRAKAQHRHLDLPLFPTTTIGSFPQTQDIRAARRAFKSGELSRDDYEARMRDEIAHAVERQEAL 481          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_BURP8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metE PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.443e-30
Identity = 77/164 (46.95%), Postives = 102/164 (62.20%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            D+L ++ SCSLLH+ VDL +E KLD +I+SWLAFA QK+ E+  LA AL   +   E    ANA A  SR++SPRV N  V+ A A +  S  +RA    AR   Q   L LP  PTTTIGSFPQT ++RR R ++KA ++    Y  +++ EI + VK QE L
Sbjct:  321 DRLWIAPSCSLLHSPVDLNSERKLDADIRSWLAFALQKLDELTLLASALNNGRACVEAELLANAKAIESRRASPRVHNAAVKAALARIDASLGQRANAYPARAAKQAAALALPAFPTTTIGSFPQTADIRRARSQFKAGELDYAGYKLAMEREITRAVKEQETL 484          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_SALRD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=metE PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.885e-30
Identity = 72/164 (43.90%), Postives = 102/164 (62.20%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            D+++V  SCSLLH  VDL  E  L DE+K+W AFA QK+ E+ ALA+   G +D  E  F  +  A A+R  S  + +  VQ   A +  S   R +  S+R   Q++ L+LP LPTTTIGSFPQT ++RR+R +YK  +IS++EY   I+E+I   +  QEE+
Sbjct:  325 DRVLVGPSCSLLHVPVDLDTEPGLSDEMKTWFAFATQKIEEIVALAERADGHEDATEALFEKSRRAHAARAESDWINDAAVQDRVAGIDASMTERDSPHSSRSPLQREALDLPTLPTTTIGSFPQTDDMRRMRAQYKKDEISKDEYEDFIEEQIADTIAAQEEI 488          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_PSEA7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=metE PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.462e-30
Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 3
Query:   15 RWQDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALA---GQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            R  ++L V+ SCSLLH+ VDL  E++LD+E++SWLAFA QK  EV  LA+AL      +    F  +   +ASR+ S R+    VQ   AA++  D RRA+  + R   Q+ +L LP  PTTTIGSFPQT  +R  R+ +K  ++S+ EY  ++  EI   V++QE L
Sbjct:  315 RLGERLWVAPSCSLLHSPVDLCREDQLDEELQSWLAFAVQKCEEVAILARALVEPEAPEVRQAFEVSRRVEASRRRSTRIHKREVQARLAAVRPQDSRRASAFAERAVQQRARLELPAFPTTTIGSFPQTSAIRLARQSWKQGRLSQAEYTEAMHSEIRHAVQVQERL 482          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_COXBU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii GN=metE PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.462e-30
Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALA-GQKDEGF-FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            D+L V+ SCSLLH  +DL  ENKLD E+KSW AFA QKV E   L + L  G++  G     N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP+ PTTTIGSFPQT ++R +RR+YK  KI +  Y   I++EI +V+ +Q +L
Sbjct:  316 DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVTERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSQIRCLRRDYKQGKIDDALYEEKIRQEIAEVIGIQVKL 479          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_COXBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metE PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.462e-30
Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALA-GQKDEGF-FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            D+L V+ SCSLLH  +DL  ENKLD E+KSW AFA QKV E   L + L  G++  G     N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP+ PTTTIGSFPQT ++R +RR+YK  KI +  Y   I++EI +V+ +Q +L
Sbjct:  316 DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVTERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSQIRCLRRDYKQGKIDDALYEEKIRQEIAEVIGIQVKL 479          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_COXBN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metE PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.462e-30
Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALA-GQKDEGF-FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            D+L V+ SCSLLH  +DL  ENKLD E+KSW AFA QKV E   L + L  G++  G     N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP+ PTTTIGSFPQT ++R +RR+YK  KI +  Y   I++EI +V+ +Q +L
Sbjct:  316 DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVTERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSQIRCLRRDYKQGKIDDALYEEKIRQEIAEVIGIQVKL 479          
The following BLAST results are available for this feature:
BLAST of FC931128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
METE_NITOC8.461e-3142.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFM1.105e-3044.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RUTMC1.105e-3044.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRSD1.105e-3043.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP81.443e-3046.955-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALRD1.885e-3043.905-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA72.462e-3042.865-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBU2.462e-3046.345-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBR2.462e-3046.345-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBN2.462e-3046.345-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34101G07EF PostHarvP1 Citrus clementina cDNA clone C34101G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931128 ID=FC931128; Name=FC931128; organism=Citrus clementina; type=EST; length=514bp
GGGCTTGAGGGTGTCGTTGGCAAGACAAGCTTGTGGTCTCCACCTCCTGC
TCACTTCTTCACACTGCTGTTGATCTTGTTAATGAGAACAAACTCGACGA
TGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGA
ATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGATGAGGGATTCTTCTCT
GCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAA
TGAGAGAGTTCAAAAGGCTGCTGCTGCTTTGAAGGGATCAGACCACAGAC
GTGCTACAAACGTTAGTGCTAGATTGGATGCTCAACAGAAGAAGCTCAAT
CTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCCACAAACCATTGA
ACTTAGGAGAGTCCGCCGTGAATACAAGGCTAAGAAGATTTCTGAGGAAG
AATATGTTGCTTCCATCAAGGAGGAAATCAACAAGGTTGTCAAACTCCAA
GAAGAGCTTGATAT
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