FC931128

Overview
NameFC931128
Unique NameFC931128
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_COXB2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuG_Q212) GN=metE PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.462e-30
Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALA-GQKDEGF-FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            D+L V+ SCSLLH  +DL  ENKLD E+KSW AFA QKV E   L + L  G++  G     N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP+ PTTTIGSFPQT ++R +RR+YK  KI +  Y   I++EI +V+ +Q +L
Sbjct:  316 DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVNERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSKIRCLRRDYKQGKIDDALYEEKIRQEIAEVIGIQVKL 479          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_COXB1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=metE PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.462e-30
Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALA-GQKDEGF-FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            D+L V+ SCSLLH  +DL  ENKLD E+KSW AFA QKV E   L + L  G++  G     N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP+ PTTTIGSFPQT ++R +RR+YK  KI +  Y   I++EI +V+ +Q +L
Sbjct:  316 DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVTERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSQIRCLRRDYKQGKIDDALYEEKIRQEIAEVIGIQVKL 479          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_PSEF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.215e-30
Identity = 74/168 (44.05%), Postives = 102/168 (60.71%), Query Frame = 3
Query:   15 RWQDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSA---NAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            R  ++L V+ SCSLLH+ VDL  E++LD E+KSWLAFA QK  EV  LA+A+   +      A   + A QASR +SPR+    VQ   AA+   D +R +  + R+  Q+  L+LP+ PTTTIGSFPQT  +R  R+ +K  K+S  EY  ++  EI   V +QE L
Sbjct:  315 RLGERLWVAPSCSLLHSPVDLDREDQLDAELKSWLAFAVQKCQEVAVLAQAVNQPQARAVLKALEQSRAVQASRAASPRIHKPAVQARVAAITTKDSQRRSAFTQRIAKQRAGLDLPLFPTTTIGSFPQTASIRLARQSFKQGKLSVAEYTEAMHSEIRHAVLVQERL 482          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_BURMS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain SAVP1) GN=metE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.215e-30
Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQ 500
            ++L V+TSCSLLH  VDL +E +LD+E+K+WLAFAAQK  EV AL  AL   +      F   A   A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP+LPTTTIGSFPQT E+RR R  +K   +    Y+ +++E++   +  Q
Sbjct:  316 ERLWVATSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAVVAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQ 476          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_BURMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei GN=metE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.215e-30
Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQ 500
            ++L V+TSCSLLH  VDL +E +LD+E+K+WLAFAAQK  EV AL  AL   +      F   A   A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP+LPTTTIGSFPQT E+RR R  +K   +    Y+ +++E++   +  Q
Sbjct:  316 ERLWVATSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAVVAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQ 476          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_BURM9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain NCTC 10229) GN=metE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.215e-30
Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQ 500
            ++L V+TSCSLLH  VDL +E +LD+E+K+WLAFAAQK  EV AL  AL   +      F   A   A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP+LPTTTIGSFPQT E+RR R  +K   +    Y+ +++E++   +  Q
Sbjct:  316 ERLWVATSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAVVAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQ 476          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_BURM7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=metE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.215e-30
Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQ 500
            ++L V+TSCSLLH  VDL +E +LD+E+K+WLAFAAQK  EV AL  AL   +      F   A   A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP+LPTTTIGSFPQT E+RR R  +K   +    Y+ +++E++   +  Q
Sbjct:  316 ERLWVATSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAVVAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQ 476          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 130.568 bits (327), Expect = 4.199e-30
Identity = 74/162 (45.68%), Postives = 97/162 (59.88%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            D++VV+TS SLLHT VDL NE KLD EIK + +FA QK+ EV  + K ++GQ       ANA +  SR  S  + +  V+   A++      RA     RL  QQK  NLP+ PTTTIGSFPQT ++R  R ++    IS EEY   I  EI KV++ QEE+
Sbjct:  327 DRVVVATSSSLLHTPVDLNNETKLDAEIKGFFSFATQKLDEVVVITKNVSGQDVAAALEANAKSVESRGKSKFIHDAAVKARVASIDEKMSTRAAPFEQRLPEQQKVFNLPLFPTTTIGSFPQTKDIRINRNKFNKGTISAEEYEKFINSEIEKVIRFQEEI 488          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.199e-30
Identity = 73/168 (43.45%), Postives = 104/168 (61.90%), Query Frame = 3
Query:   15 RWQDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAA---QASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            R+ D L V+ SCSLLH+ VDL  E++LD E+K WLAFA QK  E+  L+ AL   +      A A +   QASR  S RV N +VQ   A++  +DH+R +  + R+  Q+++L LP  PTTTIGSFPQT  +R  R+ +K  K+S  +Y  +++ EI   V++QE L
Sbjct:  322 RFGDNLWVAGSCSLLHSPVDLNREDRLDPELKGWLAFAVQKSREIAILSHALNDPEATEVVEALAQSCEIQASRAQSSRVHNPQVQARLASVTAADHQRRSAFAERITVQRERLKLPAFPTTTIGSFPQTSAIRLARQAHKQGKLSLNDYTDAMRHEIRHAVQVQENL 489          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_BUCAP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metE PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.199e-30
Identity = 68/165 (41.21%), Postives = 104/165 (63.03%), Query Frame = 3
Query:   15 RWQDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            +++ KL++ +SCSLLH+ +DL  E  LD E K W +FA QK  E++ L+KAL  + D        ++   R  S RV    VQ   + +   + +R+ + + R   Q+KK NLPILPTTTIGSFPQT+++R++RR+YK   I++ +Y   IK+ I +V+K QE+L
Sbjct:  311 KFRKKLLIGSSCSLLHSPIDLQKEKNLDKESKKWFSFAVQKCTELSLLSKAL-NKNDTDSIQKWCSSIYERNFSKRVQKIEVQNRLSEILNVNFKRSDSYNIRSREQKKKFNLPILPTTTIGSFPQTLQIRKLRRDYKQGLINDVDYEIGIKKHIKEVIKEQEKL 474          
The following BLAST results are available for this feature:
BLAST of FC931128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
METE_COXB22.462e-3046.345-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB12.462e-3046.345-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEF53.215e-3044.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURMS3.215e-3044.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURMA3.215e-3044.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURM93.215e-3044.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURM73.215e-3044.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YEAST4.199e-3045.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSESM4.199e-3043.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCAP4.199e-3041.215-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34101G07EF PostHarvP1 Citrus clementina cDNA clone C34101G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931128 ID=FC931128; Name=FC931128; organism=Citrus clementina; type=EST; length=514bp
GGGCTTGAGGGTGTCGTTGGCAAGACAAGCTTGTGGTCTCCACCTCCTGC
TCACTTCTTCACACTGCTGTTGATCTTGTTAATGAGAACAAACTCGACGA
TGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGA
ATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGATGAGGGATTCTTCTCT
GCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAA
TGAGAGAGTTCAAAAGGCTGCTGCTGCTTTGAAGGGATCAGACCACAGAC
GTGCTACAAACGTTAGTGCTAGATTGGATGCTCAACAGAAGAAGCTCAAT
CTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCCACAAACCATTGA
ACTTAGGAGAGTCCGCCGTGAATACAAGGCTAAGAAGATTTCTGAGGAAG
AATATGTTGCTTCCATCAAGGAGGAAATCAACAAGGTTGTCAAACTCCAA
GAAGAGCTTGATAT
back to top