FC931128

Overview
NameFC931128
Unique NameFC931128
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.084e-29
Identity = 74/165 (44.85%), Postives = 106/165 (64.24%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF---FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            ++L ++ SCSLLH  V L +E +LD E+KSWLAFA +K+ E++ L +AL  Q D       +A+ AAQASR++S RV   RVQ+  AA+      RA+  + R++ Q++ L LP+LPTTTIGSFPQT  +R+ R  +K  +I   EY+  I+ EI   V+ QE L
Sbjct:  313 ERLWLAPSCSLLHVPVSLAHEVRLDVELKSWLAFATEKLDELSVLGRAL-NQSDAVVAEALAASDAAQASRRASRRVVKPRVQQRLAAVSAGMADRASPFAERIERQRQALQLPLLPTTTIGSFPQTAAIRQTRAAFKRGEIGALEYLERIRAEIAVAVRKQEAL 476          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_NITEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosomonas europaea GN=metE PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.643e-29
Identity = 67/167 (40.12%), Postives = 105/167 (62.87%), Query Frame = 3
Query:   15 RWQDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            R+  +L ++ SCSLLH  VDL  E KL+ EIK+WLAF+AQK+ E+  L + L   ++  E   +A+  A+ SR  S R+ N  V +    L   D +R    + R   QQ++ NLP+LPTTTIGSFPQT  +R+ R  ++  ++S  EY+++++ EI ++++ QEE+
Sbjct:  311 RFAGELWIAPSCSLLHCPVDLALETKLEPEIKNWLAFSAQKLEEMTTLGRGLNQGRESVEAILTASDEARRSRTESSRIHNPIVHQRVDNLTERDSQRNHPFATRKHLQQQRFNLPLLPTTTIGSFPQTATIRQARAAFRKNELSHLEYLSAMRAEIREMIRKQEEI 477          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.063e-29
Identity = 72/163 (44.17%), Postives = 93/163 (57.06%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKAL---AGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L + TSCSLLH+ +DL  E KLDDE+KSW AFA QK  EV  LAKAL    G+ DE     +A  +  R+ S RV N +V     A+   D  R +    R   Q+ + N P+ PTTTIGSFPQT E+R VR ++K  +I    Y  +I E I + +  QE L
Sbjct:  317 LWIGTSCSLLHSPIDLSAETKLDDEVKSWFAFAVQKCAEVALLAKALNAPEGEYDEQLAQYSAPIR-QREHSSRVHNAKVAARLQAINAQDGERTSPYQQRAKVQRARFNFPLWPTTTIGSFPQTTEIRTVRLDFKKGRIDTTAYRTNISEHIKQAIDEQERL 478          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_MARAV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metE PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.063e-29
Identity = 69/163 (42.33%), Postives = 105/163 (64.42%), Query Frame = 3
Query:   27 KLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            +L ++ SCSLLH  VDL  E +LD +I++WLAFA QK+ E+  LA+AL   +       + N  A  SR++S RVTN  V+KA A++      R +    R+  Q+++LNLP  PTTTIGSFPQT E+R+ R +++  ++SE+ Y+  ++ EI + V+ QE+L
Sbjct:  317 RLWLAPSCSLLHAPVDLSREQELDSDIRNWLAFAVQKLDELQILARALNEGRSSVRAELADNQLAIDSRRNSHRVTNPEVRKAVASVTPELGNRHSPYPQRIARQRERLNLPAFPTTTIGSFPQTREIRQARLQFRKGELSEQAYIEQMRAEIVRCVEAQEKL 479          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_ERWCT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia carotovora subsp. atroseptica GN=metE PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 7.919e-29
Identity = 69/160 (43.12%), Postives = 98/160 (61.25%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L + +SCSLLH+ +DL  E +LDDE+KSW AFA QK  E++ L++AL     +   + +A  +A R++S RV N  V +  AA+   D +R    S R DAQ+++ NLP  PTTTIGSFPQT E+R +R ++K  ++    Y   I E I + V  QE L
Sbjct:  317 LWLGSSCSLLHSPIDLSVEVRLDDEVKSWFAFAIQKCAELSLLSQALNSGNGQALEAYSAPIRA-RRTSTRVNNVAVAQRLAAITAQDSQRQNVYSVRADAQRERFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGNNYRTGIAEHIKQAVAEQERL 475          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_PSEMY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas mendocina (strain ymp) GN=metE PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.351e-28
Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = 3
Query:   15 RWQDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSA---NAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            R  ++L V+ SCSLLH+ VDL  E++LD E+KSWLAFA QK  EV  L +AL    D    +A   +   +A+R +S R+    VQ   AA++    +R +  + R+  Q++ L LP+LPTTTIGSFPQT  +R  R+ +K  K+S  EY  ++  EI   V++QE L
Sbjct:  320 RLGERLWVAPSCSLLHSPVDLEREDQLDAELKSWLAFAVQKCQEVALLGRALEAPDDASVQAALEQSRVVRAARAASTRIHKPEVQARLAAIRPRHAQRQSPFAERIAQQRECLQLPLLPTTTIGSFPQTSAIRLARQSFKQGKLSAAEYTEAMHAEIRHAVEVQENL 487          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_YERPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.304e-28
Identity = 68/162 (41.98%), Postives = 96/162 (59.26%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I + +  QE L
Sbjct:  317 LWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKQAIAEQERL 478          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_YERP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metE PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.304e-28
Identity = 68/162 (41.98%), Postives = 96/162 (59.26%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I + +  QE L
Sbjct:  317 LWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKQAIAEQERL 478          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_ALCBS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=metE PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.304e-28
Identity = 71/165 (43.03%), Postives = 101/165 (61.21%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELD 512
            D+L ++ SCSLLH  VDL  E+ LD+E+KSWL+FA QK+ E+  L  AL G  +   G  +  AA QA R  S R+ N  V +  A        R +  + R+  QQ  L LP  PTTTIGSFPQT E+R  RR++KA K+++ +Y   ++EEI + ++ QEE++
Sbjct:  322 DRLWLAPSCSLLHCPVDLEQEDTLDNELKSWLSFAKQKLEELALLGGALRGNSNVNSGLQTQRAALQA-RGLSSRIHNPAVAQRLADASQLSRDRVSPFAERIAQQQHALQLPAFPTTTIGSFPQTREIRTARRDWKAGKLNDAQYQQQMQEEIARCIRYQEEVE 485          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_MYCLE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium leprae GN=metE PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.009e-28
Identity = 70/162 (43.21%), Postives = 101/162 (62.35%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            + VSTSCS LH    L  E  LDD ++SWLAF A+KV EV  LA+AL   +D      +A+ AA ASR+S PR+ N +V+    ++  S   R  + + R  +Q  +L+LP LPTTTIGS+PQT  +R+ R   +  +I E EY++ +K+E+   +KLQE+L
Sbjct:  321 VAVSTSCSTLHVPYSLEPETDLDDNLRSWLAFGAEKVAEVVVLARALRDGRDAVADEIAASNAAVASRRSDPRLHNGQVRARIDSIVASGTHRG-DAAQRRTSQDARLHLPPLPTTTIGSYPQTSAIRKARAALQDAEIDEAEYISRMKKEVADAIKLQEQL 481          
The following BLAST results are available for this feature:
BLAST of FC931128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
METE_RALEU2.084e-2944.855-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITEU4.643e-2940.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PROMH6.063e-2944.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MARAV6.063e-2942.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWCT7.919e-2943.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEMY1.351e-2842.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPS2.304e-2841.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERP32.304e-2841.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ALCBS2.304e-2843.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCLE3.009e-2843.215-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34101G07EF PostHarvP1 Citrus clementina cDNA clone C34101G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931128 ID=FC931128; Name=FC931128; organism=Citrus clementina; type=EST; length=514bp
GGGCTTGAGGGTGTCGTTGGCAAGACAAGCTTGTGGTCTCCACCTCCTGC
TCACTTCTTCACACTGCTGTTGATCTTGTTAATGAGAACAAACTCGACGA
TGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGA
ATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGATGAGGGATTCTTCTCT
GCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAA
TGAGAGAGTTCAAAAGGCTGCTGCTGCTTTGAAGGGATCAGACCACAGAC
GTGCTACAAACGTTAGTGCTAGATTGGATGCTCAACAGAAGAAGCTCAAT
CTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCCACAAACCATTGA
ACTTAGGAGAGTCCGCCGTGAATACAAGGCTAAGAAGATTTCTGAGGAAG
AATATGTTGCTTCCATCAAGGAGGAAATCAACAAGGTTGTCAAACTCCAA
GAAGAGCTTGATAT
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