FC931128

Overview
NameFC931128
Unique NameFC931128
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931128_ssr267 microsatellite FC931128_ssr267:267..278. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15279 contig Ccv1_Contig15279:1..514. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_ACIF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metE PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.009e-28
Identity = 73/164 (44.51%), Postives = 100/164 (60.98%), Query Frame = 3 
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            D+L V+ SCSLLHT VDL  E +LD E+KSWL+F+ QK+ EV  + +AL    +      +A  AA ASRKSSPR+ N  V +    L   D RR +    R  AQ+ +  LP  PTT+IGSFPQT E+R+ R + +  ++S  +Y  +++ EI  VVK QE L
Sbjct:  341 DRLWVAPSCSLLHTPVDLEQETELDAELKSWLSFSVQKLDEVAIIGRALKEGVESVAQELAAARAAVASRKSSPRIHNPAVAQRLEGLGQDDGRRKSPFPIREAAQRARFKLPAFPTTSIGSFPQTPEIRKARLQNRKGELSNADYQKAMEAEIALVVKEQERL 504
[Close]
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_ACIF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metE PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.009e-28
Identity = 73/164 (44.51%), Postives = 100/164 (60.98%), Query Frame = 3 
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            D+L V+ SCSLLHT VDL  E +LD E+KSWL+F+ QK+ EV  + +AL    +      +A  AA ASRKSSPR+ N  V +    L   D RR +    R  AQ+ +  LP  PTT+IGSFPQT E+R+ R + +  ++S  +Y  +++ EI  VVK QE L
Sbjct:  341 DRLWVAPSCSLLHTPVDLEQETELDAELKSWLSFSVQKLDEVAIIGRALKEGVESVAQELAAARAAVASRKSSPRIHNPAVAQRLEGLGQDDGRRKSPFPIREAAQRARFKLPAFPTTSIGSFPQTPEIRKARLQNRKGELSNADYQKAMEAEIALVVKEQERL 504
[Close]
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_YERPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis (strain Pestoides F) GN=metE PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.930e-28
Identity = 68/162 (41.98%), Postives = 95/162 (58.64%), Query Frame = 3 
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L
Sbjct:  317 LWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERL 478
[Close]
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_YERPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metE PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.930e-28
Identity = 68/162 (41.98%), Postives = 95/162 (58.64%), Query Frame = 3 
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L
Sbjct:  317 LWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERL 478
[Close]
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_YERPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis GN=metE PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.930e-28
Identity = 68/162 (41.98%), Postives = 95/162 (58.64%), Query Frame = 3 
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L
Sbjct:  317 LWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERL 478
[Close]
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_YERPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metE PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.930e-28
Identity = 68/162 (41.98%), Postives = 95/162 (58.64%), Query Frame = 3 
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L
Sbjct:  317 LWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERL 478
[Close]
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_CORGB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum (strain R) GN=metE PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.930e-28
Identity = 73/160 (45.62%), Postives = 98/160 (61.25%), Query Frame = 3 
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            + VSTSCSLLH    L  EN ++ E++ WLAF ++K+ EV  LA ALAG  D   F A +AA ASR++SPR T    Q+     +GS + R T        Q+K L LP LPTTTIGSFPQT  +R  R   + + I+ E+Y  +++EEI+ V+  QEEL
Sbjct:  312 IAVSTSCSLLHVPYTLEAEN-IEPEVRDWLAFGSEKITEVKLLADALAGNIDAAAFDAASAAIASRRTSPR-TAPITQELPGRSRGSFNTRVT-------LQEKSLELPALPTTTIGSFPQTPSIRSARARLRKESITLEQYEEAMREEIDLVIAKQEEL 462
[Close]
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_VIBFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain MJ11) GN=metE PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.704e-28
Identity = 70/165 (42.42%), Postives = 100/165 (60.61%), Query Frame = 3 
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQA--SRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELD 512
            DKL +++SCSLLH+ VDL  E +L  E   W AFA QK+ EV  LA AL G ++    + +  +Q    R+S+  +    VQ+  AA+  +   RA   S R   Q +KL LP+LPTTTIGSFPQT ++R+ R  Y+  K++E++YV ++K  I   V+ QE LD
Sbjct:  328 DKLWIASSCSLLHSPVDLEQETELSKETLQWFAFAKQKLREVTLLADALDGNQN-AILACHQYSQPLRERESAEHINKPAVQQRLAAITPALAERAEAYSVRAQHQAEKLGLPLLPTTTIGSFPQTSDIRQQRSAYRTGKLNEQDYVTAMKGHIADAVERQERLD 491
[Close]
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_CORGL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum GN=metE PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.704e-28
Identity = 73/160 (45.62%), Postives = 97/160 (60.62%), Query Frame = 3 
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            + VSTSCSLLH    L  EN ++ E++ WLAF ++K+ EV  LA ALAG  D   F A +AA ASR++SPR T    Q+     +GS   R T        Q+K L LP LPTTTIGSFPQT  +R  R   + + I+ E+Y  +++EEI+ V+  QEEL
Sbjct:  312 IAVSTSCSLLHVPYTLEAEN-IEPEVRDWLAFGSEKITEVKLLADALAGNIDAAAFDAASAAIASRRTSPR-TAPITQELPGRSRGSFDTRVT-------LQEKSLELPALPTTTIGSFPQTPSIRSARARLRKESITLEQYEEAMREEIDLVIAKQEEL 462
[Close]
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_VIBF1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=metE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.755e-28
Identity = 70/165 (42.42%), Postives = 100/165 (60.61%), Query Frame = 3 
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQA--SRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELD 512
            DKL +++SCSLLH+ VDL  E +L  E   W AFA QK+ EV  LA AL G ++    + +  +Q    R+S+  +    VQ+  AA+  +   RA   S R   Q +KL LP+LPTTTIGSFPQT ++R+ R  Y+  K++E++YV ++K  I   V+ QE LD
Sbjct:  328 DKLWIASSCSLLHSPVDLDQETELSKETLQWFAFAKQKLREVTLLADALDGNQN-AILACHQYSQPLRERESAEHINKPAVQQRLAAITPALAERAEAYSVRAQHQAEKLGLPLLPTTTIGSFPQTSDIRQQRSAYRTGKLNEQDYVTAMKGHIADAVERQERLD 491
The following BLAST results are available for this feature:
BLAST of FC931128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
METE_ACIF53.009e-2844.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF23.009e-2844.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPP3.930e-2841.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPN3.930e-2841.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPE3.930e-2841.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPA3.930e-2841.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGB3.930e-2845.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBFM6.704e-2842.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGL6.704e-2845.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBF18.755e-2842.425-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34101G07EF PostHarvP1 Citrus clementina cDNA clone C34101G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931128 ID=FC931128; Name=FC931128; organism=Citrus clementina; type=EST; length=514bp
GGGCTTGAGGGTGTCGTTGGCAAGACAAGCTTGTGGTCTCCACCTCCTGC
TCACTTCTTCACACTGCTGTTGATCTTGTTAATGAGAACAAACTCGACGA
TGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGA
ATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGATGAGGGATTCTTCTCT
GCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAA
TGAGAGAGTTCAAAAGGCTGCTGCTGCTTTGAAGGGATCAGACCACAGAC
GTGCTACAAACGTTAGTGCTAGATTGGATGCTCAACAGAAGAAGCTCAAT
CTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCCACAAACCATTGA
ACTTAGGAGAGTCCGCCGTGAATACAAGGCTAAGAAGATTTCTGAGGAAG
AATATGTTGCTTCCATCAAGGAGGAAATCAACAAGGTTGTCAAACTCCAA
GAAGAGCTTGATAT
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