FC931128

Overview
NameFC931128
Unique NameFC931128
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.755e-28
Identity = 66/169 (39.05%), Postives = 100/169 (59.17%), Query Frame = 3
Query:   21 QDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQ-----ASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELD 512
            Q  L + +SCSLLH+ +DL  E+KL++ IK+W AFA QK  E+  L  AL    ++     N   +       R +S  + N +VQ+    +   DH R T    R+  Q  + NLP+ PTTTIGSFPQT E+R++R ++K K+I+E+ Y   I++ I K+++ QE+LD
Sbjct:  318 QRSLWIGSSCSLLHSPIDLNIESKLNNNIKNWFAFAIQKCSEIKLLCDALNSNHNDNSDQQNILKKYYNTNIQRLNSNIINNPQVQERCKNIITLDHSRKTKHITRMKLQHNRFNLPLYPTTTIGSFPQTSEIRKLRLKFKNKQINEDYYYTHIQQYIKKIIQEQEKLD 486          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_YERE8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=metE PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.143e-27
Identity = 67/162 (41.36%), Postives = 96/162 (59.26%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    +      +A +A   +R++S RV N +V++  AA+   D  R     AR  AQ+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I + +  QE L
Sbjct:  317 LWLGSSCSLLHSPIDLSEETRLDAEVKSWFAFALQKCAELALLTQALNAPSEAKLAELAAYSAPIRARRASSRVHNPQVEQRLAAITAQDIERQQPYEARAAAQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKQAIAEQERL 478          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_SERP5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Serratia proteamaculans (strain 568) GN=metE PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.143e-27
Identity = 68/162 (41.98%), Postives = 95/162 (58.64%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKAL--AGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L + TSCSLLH+ +DL  E +LD+E+KSW AFA QK  E+  L+ AL   G   +    A +A   +R+ S RV N +V +  AA+   D  R    + R  AQ+++ NLP  PTTTIGSFPQT E+R +R ++K  ++    Y  SI E I + +  QE L
Sbjct:  317 LWIGTSCSLLHSPIDLSVETRLDEEVKSWFAFALQKCGELALLSAALNAPGAAKQAELDAYSAPIRARRQSSRVHNAQVGQRLAAITAQDSERQRPYAERAQAQRERFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGNNYRTSISEHIKQAIVEQERL 478          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_CITK8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=metE PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.143e-27
Identity = 70/160 (43.75%), Postives = 94/160 (58.75%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L V++SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L  AL    D     A +A   +R+ S RV N  V+K  AA+   D +RA+  +AR  AQ+ + NLP  PTTTIGSFPQT E+R +R ++K   +    Y   I E I + +  QE L
Sbjct:  317 LWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCGELALLRDAL-NSGDTAKLEAWSAPIQARRHSTRVHNAAVEKRLAAITAQDSQRASPYAARAQAQRNRFNLPSWPTTTIGSFPQTTEIRGLRLDFKKGNLDANHYRTGIAEHIKQAIVEQERL 475          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.493e-27
Identity = 71/163 (43.56%), Postives = 94/163 (57.67%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEE 506
            D++ VS SCSLLH  +D   E  +D E   WLAFA QK  E+  LA+ L    D      +AN A  ASR  +    +  V+   AA+  +D RR+   + R  AQ+  L LP+LPTTTIGSFPQT ELR  R E +A +I E EY   +K+EI +V+  QE+
Sbjct:  327 DRVDVSASCSLLHVPLDADAERGIDPETARWLAFAKQKTEEIVVLARGLGSGTDAIASELAANRADLASRTGAALTRDPAVRARTAAVTEADGRRSQPYAERSAAQRAGLGLPLLPTTTIGSFPQTTELRTARAELRAGRIDEAEYEERVKDEIREVLSFQEK 489          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.493e-27
Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            + VSTSCS LH    L  E  LDD ++SWLAF A+KV EV  LA+AL    D      +++ AA ASRK  PR+ N +++    A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQT  +R  R   +A +I E EYV  +++EI +V+ LQE L
Sbjct:  321 VAVSTSCSTLHVPYSLEPETDLDDALRSWLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQTSAIRVARAALRAGEIDEAEYVRRMRQEITEVIALQERL 481          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.493e-27
Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            + VSTSCS LH    L  E  LDD ++SWLAF A+KV EV  LA+AL    D      +++ AA ASRK  PR+ N +++    A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQT  +R  R   +A +I E EYV  +++EI +V+ LQE L
Sbjct:  321 VAVSTSCSTLHVPYSLEPETDLDDALRSWLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQTSAIRVARAALRAGEIDEAEYVRRMRQEITEVIALQERL 481          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_MYCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metE PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.493e-27
Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            + VSTSCS LH    L  E  LDD ++SWLAF A+KV EV  LA+AL    D      +++ AA ASRK  PR+ N +++    A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQT  +R  R   +A +I E EYV  +++EI +V+ LQE L
Sbjct:  321 VAVSTSCSTLHVPYSLEPETDLDDALRSWLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQTSAIRVARAALRAGEIDEAEYVRRMRQEITEVIALQERL 481          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_MYCBO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis GN=metE PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.493e-27
Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            + VSTSCS LH    L  E  LDD ++SWLAF A+KV EV  LA+AL    D      +++ AA ASRK  PR+ N +++    A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQT  +R  R   +A +I E EYV  +++EI +V+ LQE L
Sbjct:  321 VAVSTSCSTLHVPYSLEPETDLDDALRSWLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQTSAIRVARAALRAGEIDEAEYVRRMRQEITEVIALQERL 481          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_AERS4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Aeromonas salmonicida (strain A449) GN=metE PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.493e-27
Identity = 68/162 (41.98%), Postives = 99/162 (61.11%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            ++L V++SCSLLH+ VDL  E++LD + +SW AFA QK  E+  L+  L G  D    +A +     R+S  RV  + VQ   A+L  SD  R +    R  AQ+  L LP+LPTTTIGSFPQT E+R +R+E++A +I +  Y A I+ +I   ++ QE +
Sbjct:  314 ERLWVASSCSLLHSPVDLTLEHELDPQTRSWFAFALQKCYELGLLSDYLDGG-DLDKITAYSQPLVDRESDSRVHKKAVQSRLASLTNSDFDRQSAYPVRAQAQRNDLKLPLLPTTTIGSFPQTSEIRVLRQEWRAGRIDDSAYEAGIQAQIKDAIERQEAI 474          
The following BLAST results are available for this feature:
BLAST of FC931128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
METE_BLOFL8.755e-2839.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERE81.143e-2741.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SERP51.143e-2741.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CITK81.143e-2743.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG1.493e-2743.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTU1.493e-2744.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA1.493e-2744.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBP1.493e-2744.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBO1.493e-2744.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_AERS41.493e-2741.985-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34101G07EF PostHarvP1 Citrus clementina cDNA clone C34101G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931128 ID=FC931128; Name=FC931128; organism=Citrus clementina; type=EST; length=514bp
GGGCTTGAGGGTGTCGTTGGCAAGACAAGCTTGTGGTCTCCACCTCCTGC
TCACTTCTTCACACTGCTGTTGATCTTGTTAATGAGAACAAACTCGACGA
TGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGA
ATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGATGAGGGATTCTTCTCT
GCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAA
TGAGAGAGTTCAAAAGGCTGCTGCTGCTTTGAAGGGATCAGACCACAGAC
GTGCTACAAACGTTAGTGCTAGATTGGATGCTCAACAGAAGAAGCTCAAT
CTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCCACAAACCATTGA
ACTTAGGAGAGTCCGCCGTGAATACAAGGCTAAGAAGATTTCTGAGGAAG
AATATGTTGCTTCCATCAAGGAGGAAATCAACAAGGTTGTCAAACTCCAA
GAAGAGCTTGATAT
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