FC931128

Overview
NameFC931128
Unique NameFC931128
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_VIBPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio parahaemolyticus GN=metE PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.951e-27
Identity = 71/165 (43.03%), Postives = 100/165 (60.61%), Query Frame = 3
Query:   24 DKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQA--SRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELD 512
            DKL V++SCSLLH+ VDL  E +L +E+KSW AFA QKV EV  L +AL G ++    + +  +Q   +RK++  V   +VQ     +  S   R+   + R   Q + L LP+LPTTTIGSFPQT E+R  R  Y+  ++SE +Y+ ++K  I   VK QE LD
Sbjct:  318 DKLWVASSCSLLHSPVDLELETELSEEVKSWFAFAKQKVTEVALLGRALDGDQN-AILACDTYSQPIKARKTATHVNKPQVQVRLNNITASLAERSAPYAERAAHQAEVLGLPLLPTTTIGSFPQTGEIRVQRSAYRTGQLSESDYIQALKGHIADAVKRQEALD 481          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_MYCPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium paratuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.951e-27
Identity = 70/163 (42.94%), Postives = 99/163 (60.74%), Query Frame = 3
Query:   27 KLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            ++ VSTSCS LH    L  E  LDD ++SWLAF  +KV EV  LA+AL   ++      +A+ AA ASRKS PR+ N+RV+    ++  S   R      R  +Q  +L+LP LPTTTIGS+PQT  +R+ R   ++ +I + EY   +K+EI  V+ LQE+L
Sbjct:  316 RVAVSTSCSTLHVPYSLEPETDLDDALRSWLAFGREKVAEVVTLARALRDGREAVADEIAASNAAVASRKSDPRLHNDRVRARIDSIVASGSHRGDPAQRRA-SQDARLHLPPLPTTTIGSYPQTSAIRKARAALRSGEIDQAEYERRMKKEIADVITLQEQL 477          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_MYCA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium avium (strain 104) GN=metE PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.951e-27
Identity = 70/163 (42.94%), Postives = 99/163 (60.74%), Query Frame = 3
Query:   27 KLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            ++ VSTSCS LH    L  E  LDD ++SWLAF  +KV EV  LA+AL   ++      +A+ AA ASRKS PR+ N+RV+    ++  S   R      R  +Q  +L+LP LPTTTIGS+PQT  +R+ R   ++ +I + EY   +K+EI  V+ LQE+L
Sbjct:  316 RVAVSTSCSTLHVPYSLEPETDLDDALRSWLAFGREKVAEVVTLARALRDGREAVADEIAASNAAVASRKSDPRLHNDRVRARIDSIVASGSHRGDPAQRRA-SQDARLHLPPLPTTTIGSYPQTSAIRKARAALRSGEIDQAEYERRMKKEIADVITLQEQL 477          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_KLEP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.327e-27
Identity = 69/161 (42.86%), Postives = 93/161 (57.76%), Query Frame = 3
Query:   27 KLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            +L V++SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L  AL           +A  QA R+ S RV N  V+K  AA+   D +RA+    R  AQ+++ NLP  PTTTIGSFPQT E+R +R ++K   +    Y   I E I + +  QE L
Sbjct:  316 ELWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCGELALLRDALNSGDTAAITEWSAPIQA-RRHSTRVHNAEVEKRLAAITAQDSQRASPYEVRAQAQRQRFNLPKWPTTTIGSFPQTTEIRGLRLDFKKGNLDASHYRTGIAEHIKQAIVEQERL 475          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_VIBHB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metE PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.345e-27
Identity = 72/168 (42.86%), Postives = 100/168 (59.52%), Query Frame = 3
Query:   15 RWQDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQA--SRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELD 512
            R  D+L V++SCSLLH+ VDL  E  L DE+KSW AFA QKV EV  L +AL G ++    +    +Q    RK++  V   +VQ+   ++  S  +R+   + R   Q + L LP+LPTTTIGSFPQT ++R  R  Y+  K+S+ EY  ++K  I   VK QE LD
Sbjct:  315 RLGDRLWVASSCSLLHSPVDLDLEPALSDEVKSWFAFAKQKVTEVALLGRALDGDRN-AILACETYSQPIQDRKTATHVNKPQVQERLNSITASLTQRSAPYAERAAHQAEVLGLPLLPTTTIGSFPQTGDIRVQRSAYRTGKLSQTEYNQALKGHIADAVKRQEALD 481          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_KLEP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae (strain 342) GN=metE PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.345e-27
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            L V++SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L  AL           +A  QA R+ S RV N  V+K  AA+   D +RA+    R  AQ+++ NLP  PTTTIGSFPQT E+R +R ++K   +    Y   I E I + +  QE L
Sbjct:  317 LWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCGELALLRDALNSGDTAAITEWSAPIQA-RRHSTRVHNAEVEKRLAAITAQDSQRASPYEVRAQAQRQRFNLPKWPTTTIGSFPQTTEIRGLRLDFKKGNLDASHYRTGIAEHIKQAIVEQERL 475          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_BLOPB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia pennsylvanicus (strain BPEN) GN=metE PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.345e-27
Identity = 67/166 (40.36%), Postives = 96/166 (57.83%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD-----EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELD 512
            L + +SCSLLH+ +DL  E KLD  IK W AFA QK  E+  L  AL  +       E   S    +   R  S  + N +V+K    +    + R++  + R+  Q KKLNLP+ PTTTIGSFPQT E+R++R  +K  +I++E+Y  +IK  I K++  QE+LD
Sbjct:  317 LWIGSSCSLLHSPIDLNTEIKLDKHIKEWFAFALQKCYEIKMLCAALNAENTSDATYEDTLSEYYISNNLRSYSSTIHNIQVKKRLEHIDEISYSRSSPYTTRVTLQHKKLNLPLFPTTTIGSFPQTEEIRKLRSRFKNNQINKEDYHLNIKNYIKKIIMEQEKLD 482          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_PELCD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.675e-27
Identity = 69/165 (41.82%), Postives = 94/165 (56.97%), Query Frame = 3
Query:   15 RWQDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            R  D+++++ SCSLLH  VDL  E  LD  I+SWLAFA QK  EVN +  AL G+       AN  A  +R+ S  V  + V++  A +    + R ++   R   QQ  L LP LPTTTIGSFPQ   +R  RR +K  +ISEE+Y A ++  I + +  QE L
Sbjct:  314 RGSDRVMIAPSCSLLHVPVDLAGEAVLDPRIRSWLAFARQKCQEVNVVRLALDGEDVTEVLQANDTAMENRRKSALVHRDAVRRRMADISPDMYCRRSSFEER-KKQQAWLRLPTLPTTTIGSFPQVAGVRSARRSFKQGRISEEQYRAEMQRYIREAIAQQEAL 477          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_COREF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium efficiens GN=metE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.675e-27
Identity = 74/162 (45.68%), Postives = 99/162 (61.11%), Query Frame = 3
Query:   30 LVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAA--AALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            + VSTSCSLLH    L  E  L+ E++ WLAF  +KV EV ALA ALAG+ +E  F A AAA A R+ S       V  AA  A +  +D  R+     R  AQ + L+LP LPTTTIGSFPQT E+R  R  Y+A  ++ E+Y  +++ EI +V++ QE+L
Sbjct:  314 VAVSTSCSLLHVPYALTAETGLNPEVREWLAFGEEKVREVVALADALAGEINESLFDAAAAALADRRHS-------VLTAARDADITDADRSRSP-FEVRAAAQDEALDLPPLPTTTIGSFPQTREIRSARARYRAGHLTPEQYEDAMRAEIAQVIRAQEDL 467          
BLAST of FC931128 vs. ExPASy Swiss-Prot
Match: METE_BRAJA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bradyrhizobium japonicum GN=metE PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 5.675e-27
Identity = 64/162 (39.51%), Postives = 100/162 (61.73%), Query Frame = 3
Query:   27 KLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANA-AAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEEL 509
            ++ ++ SCSLLH  VD+  E  L  ++KSWLAF+ QK+ E+  LA+ LAG ++ G   A +  A  +R++SP++ N  V     A+  +  +RAT  + R + Q+++  LP  PTTTIGSFPQT  +R  R  +    +SEE+Y   +KEEI + V+ QE++
Sbjct:  336 RVQLAPSCSLLHVPVDVELETGLASDVKSWLAFSVQKMRELAILARVLAGDQNVGLALAESECAATARRTSPKIHNANVAVRMRAIDQTMRQRATPFARRSEIQRERFGLPAFPTTTIGSFPQTTAVRNARAAHARGAMSEEQYDRFLKEEIARAVRWQEDI 497          
The following BLAST results are available for this feature:
BLAST of FC931128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
METE_VIBPA1.951e-2743.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCPA1.951e-2742.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCA11.951e-2742.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP73.327e-2742.865-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHB4.345e-2742.865-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP34.345e-2743.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOPB4.345e-2740.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PELCD5.675e-2741.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COREF5.675e-2745.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BRAJA5.675e-2739.515-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34101G07EF PostHarvP1 Citrus clementina cDNA clone C34101G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931128 ID=FC931128; Name=FC931128; organism=Citrus clementina; type=EST; length=514bp
GGGCTTGAGGGTGTCGTTGGCAAGACAAGCTTGTGGTCTCCACCTCCTGC
TCACTTCTTCACACTGCTGTTGATCTTGTTAATGAGAACAAACTCGACGA
TGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGA
ATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGATGAGGGATTCTTCTCT
GCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAA
TGAGAGAGTTCAAAAGGCTGCTGCTGCTTTGAAGGGATCAGACCACAGAC
GTGCTACAAACGTTAGTGCTAGATTGGATGCTCAACAGAAGAAGCTCAAT
CTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCCACAAACCATTGA
ACTTAGGAGAGTCCGCCGTGAATACAAGGCTAAGAAGATTTCTGAGGAAG
AATATGTTGCTTCCATCAAGGAGGAAATCAACAAGGTTGTCAAACTCCAA
GAAGAGCTTGATAT
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