FC931130

Overview
NameFC931130
Unique NameFC931130
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHI2_RHIOL (Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.134e-29
Identity = 77/194 (39.69%), Postives = 97/194 (50.00%), Query Frame = 1
Query:  127 ISVYWGQNGNEGSLADA-----CSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNN------GCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARAL-SNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFN 672
            +  YWGQN   GS   A     C SG    V ++FL  F  G  P+INL+  C  T         C  +  +IK CQ +G+KV                   +Q AQ +W+ F GG S +RP GDAV+DG+D DIEGGS+  +     AL   FS      + AAPQCP+PDA LG  L +  FDYV VQF  N
Sbjct:   31 VMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGIPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFGGGNSDTRPFGDAVIDGVDLDIEGGSSTGYVAFVNALRQKFS--SNFLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNN 222          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHI1_RHINI (Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.134e-29
Identity = 76/200 (38.00%), Postives = 104/200 (52.00%), Query Frame = 1
Query:  109 YTSAGV-ISVYWGQNG-----NEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCD----PTNN--GCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFN 672
            Y+S GV +  YWGQN       +GSL   C SG   ++ ++FL+ F  G  P+INLA  C+    P  N   C  + ++IKTCQ  G+KV                   +  A+ +W+ F GG S +RP  DAV+DGID DIEGGS+  +     AL +   +    + AAPQCP+PDA LG  +     D+V VQF  N
Sbjct:   22 YSSNGVNVMYYWGQNSAGGSNTQGSLVSYCQSGQVDVIILSFLNKFNMGGLPEINLASACEQTFFPNTNLLHCPTVGSDIKTCQSNGVKVLLSLGGAAGSYGFSSDSEGQTFAETIWNLFGGGTSDTRPFDDAVIDGIDLDIEGGSSTGYAAFVTALRS---KGHFLIGAAPQCPFPDAILGSVIDAVGLDFVNVQFYNN 218          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CONB_CANEN (Concanavalin B OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25
Identity = 73/197 (37.06%), Postives = 102/197 (51.78%), Query Frame = 1
Query:  115 SAGVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFG-NGQTPQINLAGHCDPT-NNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQY-WDELARALSNFSQ--QKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            S+  I+VYWGQ   +G L D C + NY IV I+FL  FG   + P++ L G C P+  N C+ L ++IK CQ  G+KV                   + +A++L  +FL  +    PLG   LDGI FDI+   ++  WD L   L       Q    L+AAP C  PD +L  A+ T  FDY++V+F  +  CQYS
Sbjct:   28 SSTEIAVYWGQR-EDGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSFLESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREG-PLGKVALDGIHFDIQKPVDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDEYLDNAIQTRHFDYIFVRFYNDRSCQYS 222          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHI1_CANAL (Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25
Identity = 69/194 (35.57%), Postives = 97/194 (50.00%), Query Frame = 1
Query:  115 SAGVISVYWGQN--GNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNG----CAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNF--SQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFN 672
            SA  I+ YWGQN  G++ +L D CSS    I+ ++FL  F N     +N A  C  T +     C+ + ++IK+CQ QG  +                    Q A  LW+ F GG+ S RP  DA++DG DFDIE      +  LA  L  +  +  K  YL+AAPQCPYPD  +G  +     D+ ++QF  N
Sbjct:   16 SASNIAAYWGQNAGGDQQTLGDYCSSSPASIIILSFLDGFPN---LSLNFANQCSGTFSSGLAHCSQIGSDIKSCQQQGKTILLSLGGATGNYGFSSDSEAVQFAGTLWNKFGGGKDSERPFDDAIVDGFDFDIENKDQTGYAALATQLRKYFSTGTKSYYLSAAPQCPYPDESVGDLMSQVDLDFAFIQFYNN 206          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHI2_CANAL (Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 70/196 (35.71%), Postives = 97/196 (49.49%), Query Frame = 1
Query:  112 TSAGVISVYWGQNGNEGS--LADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNG----CAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARAL-SNFSQ--QKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFN 672
            +++  +++YWGQNG  G   LA  C   +  IV ++FL+ F +     +N A  C  T       C+ +  +IKTCQ  G  V                    + A  LW+ F  G+   RP  DAV+DG DFDIE G    + ELA AL   F++   K  +L+AAPQCPYPDA LG  L     D+ ++QF  N
Sbjct:   20 SASNQVALYWGQNGAGGQERLAQYCQETDVDIVLLSFLNLFPDPLN--VNFANQCGNTFESGLLHCSQIGADIKTCQSLGKTVLLSLGGGVGDYGFSDVASATKFADTLWNKFGAGEDPERPFDDAVVDGFDFDIEHGGATGYPELATALRGKFAKDTSKNYFLSAAPQCPYPDASLGDLLSKVPLDFAFIQFYNN 213          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: XIP2_ORYSJ (Xylanase inhibitor protein 2 OS=Oryza sativa subsp. japonica GN=Chib3H-h PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23
Identity = 68/195 (34.87%), Postives = 102/195 (52.31%), Query Frame = 1
Query:  127 ISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSS--SRPLG-DAVLDGIDFDIEGGSNQYWDELARALSNFSQQKK----VYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            ++VYWG++  EGSL +AC +G Y  V I F + FG+G+   ++++GH        A +  +IK CQ +GI V                     VA  LW+ +LGG  +  +RP G DA +DGIDF I+ G   ++D+LAR L  +++  +    V L A  +C YPD  L  AL TG+F  + V+   +  C  S
Sbjct:   32 LAVYWGRHKEEGSLREACDTGRYTTVIITFYNAFGHGRY-SLDISGH------PLAAVGADIKHCQSRGITVLLSIGGQGGAYSLPTNASAADVADNLWNAYLGGHRAGVARPFGDDAAVDGIDFFIDQGGADHYDDLARRLDGYNKYYRGRVGVLLTATTRCSYPDHRLEKALATGVFARIHVRMFGDEQCTMS 219          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHIT_YEAST (Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 73/197 (37.06%), Postives = 97/197 (49.24%), Query Frame = 1
Query:  127 ISVYWGQN--GNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNG----CAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSS-RPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ--KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            I+VYWGQN  G + SLA  C S +  I  ++FL+ F    T  +N A  C  T +     C  ++ +I+TCQ  G KV                      AQ LWD F  G  +S RP   AV+DG DFDIE  +   +  LA  L     +  K+ YL+AAPQCPYPDA +G  L     D+ ++QF +N  C  S
Sbjct:   29 IAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQF---PTLGLNFANACSDTFSDGLLHCTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASERPFDSAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDASVGDLLENADIDFAFIQF-YNNYCSVS 221          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHI3_CANAL (Chitinase 3 OS=Candida albicans GN=CHT3 PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.037e-21
Identity = 70/195 (35.90%), Postives = 97/195 (49.74%), Query Frame = 1
Query:  127 ISVYWGQN--GNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTN--NG---CAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQS---SSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ---KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFN 672
            ++VYWGQN  G++  L+  C S    IV ++F+  F +    Q+N A  C+ T   NG   C  ++ +IK CQ +G  +                   +Q A  LWD F   ++   + RP  DAVLDG DFDIE   +  +  LA  L    Q+   K  YL AAPQCPYPDA +G  L     D+V++QF  N
Sbjct:   25 VAVYWGQNSGGSQQRLSYYCDSDAVDIVILSFMHQFPS--PIQLNFANACEGTYTANGILQCQTIAEDIKYCQNKGKTILLSLGGAAGSYGFSDDATAKQFAHTLWDLFGNSKNLATNDRPFYDAVLDGFDFDIENNWSTGYPALATELRTLFQKDTSKNYYLGAAPQCPYPDASVGPLLKQSEIDFVFIQFYNN 217          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: XIP1_ORYSJ (Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21
Identity = 64/196 (32.65%), Postives = 101/196 (51.53%), Query Frame = 1
Query:  121 GVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSS--RPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKK----VYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            G ++V+WG+N NEG+L + C +G Y  V I+F S FG+G+    +L+GH          +  +IK CQ + I V                     VA  +W+  + G+     RP GDA +DGIDF I+ G+  ++D+LAR L  +++  +    V L A  +C +PD  +  AL T LF+ + V+F  +  C Y+
Sbjct:   34 GQMTVFWGRNKNEGTLKETCDTGLYTTVVISFYSVFGHGRY-WGDLSGH------DLRVIGADIKHCQSKNIFVFLSIGGAGKDYSLPTSKSAADVADNIWNAHMDGRRPGVFRPFGDAAVDGIDFFIDQGAPDHYDDLARNLYAYNKMYRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDDATCSYN 222          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: XIP1_WHEAT (Xylanase inhibitor protein 1 OS=Triticum aestivum GN=XIPI PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.357e-20
Identity = 63/188 (33.51%), Postives = 96/188 (51.06%), Query Frame = 1
Query:  121 GVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSS--RPLGDAVLDGIDFDIEGGS-NQYWDELARALSNFSQQ----KKVYLAAAPQCPYPD-AWLGGALGTGLFDYVWVQ 660
            G ++V+WG+N  EGSL +AC SG Y +V ++FL  FG      ++L+GH        + +  +IK CQ +G+ V                     +   LW+ + GG   S  RP GDA LDG+D  +E G+    +D LA  L+  + +    K ++L A  +C YP  A +G AL TG+F+ V V+
Sbjct:   36 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGH------DLSSVGADIKHCQSKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWLDGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVR 217          
The following BLAST results are available for this feature:
BLAST of FC931130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CHI2_RHIOL5.134e-2939.69Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 S... [more]
CHI1_RHINI5.134e-2938.00Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1[more]
CONB_CANEN1.546e-2537.06Concanavalin B OS=Canavalia ensiformis PE=1 SV=1[more]
CHI1_CANAL7.672e-2535.57Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2[more]
CHI2_CANAL8.483e-2435.71Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1[more]
XIP2_ORYSJ1.447e-2334.87Xylanase inhibitor protein 2 OS=Oryza sativa subsp... [more]
CHIT_YEAST2.468e-2337.06Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 ... [more]
CHI3_CANAL1.037e-2135.90Chitinase 3 OS=Candida albicans GN=CHT3 PE=3 SV=2[more]
XIP1_ORYSJ3.940e-2132.65Xylanase inhibitor protein 1 OS=Oryza sativa subsp... [more]
XIP1_WHEAT4.357e-2033.51Xylanase inhibitor protein 1 OS=Triticum aestivum ... [more]

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Properties
Property NameValue
Genbank descriptionC34101G09EF PostHarvP1 Citrus clementina cDNA clone C34101G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931130 ID=FC931130; Name=FC931130; organism=Citrus clementina; type=EST; length=690bp
GAACGAATGTTAAGCCAAGCACTATTAAGCCATAAGCACACGATGGCGCA
TCAGTTTACTCTCGGAAAATTCCTGTTCTGCCTGTTGCAGCTGGCTGCCC
TGTTCACTTACACCAGTGCTGGTGTGATCTCAGTGTACTGGGGTCAGAAC
GGAAATGAAGGAAGTTTGGCAGATGCTTGTTCGTCCGGCAATTATGGAAT
TGTGAACATCGCTTTCCTATCCACATTTGGCAATGGCCAGACTCCGCAAA
TCAACCTAGCTGGCCACTGCGACCCGACCAATAATGGTTGCGCCGGGTTG
AGCAATGAAATAAAAACTTGCCAGGGCCAAGGCATCAAGGTCTTGCTCTC
CATTGGAGGTGCTTCCGGAAGCTATTCCCTTTCCTCTGCTGATGACGCCA
GGCAAGTCGCACAATTCTTGTGGGACCATTTTCTTGGAGGCCAATCAAGC
TCCCGGCCATTAGGTGATGCAGTTTTAGATGGAATCGATTTCGATATTGA
GGGAGGCTCAAACCAATACTGGGACGAACTAGCCAGGGCCTTGTCAAATT
TTAGCCAACAGAAGAAGGTTTACTTAGCAGCAGCTCCACAATGTCCGTAC
CCTGATGCATGGCTTGGCGGTGCACTAGGAACTGGCTTATTTGATTACGT
TTGGGTCCAATTCTANTTCAATCCTCCTTGTCAGTATTCC
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