FC931130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHI2_COCP7 (Endochitinase 2 OS=Coccidioides posadasii (strain C735) GN=CTS2 PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 58/208 (27.88%), Postives = 90/208 (43.27%), Query Frame = 1 Query: 127 ISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTF---GNGQTPQINLAGHCDPTN------------NGCAGLSNEIKTCQ--GQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHF---LGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ---KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPC 681 ++VYWGQ + L+ C ++ I+ + F++ F G P N C + +GC + ++ C+ G+ I + A FLW F + RP G+A +DG DFDIE GSN + + R L Q + Y++AAPQC PD +L A+ FD++++QF NP C Sbjct: 31 LAVYWGQGAGQNRLSYFCEKTSFDIIVVGFINVFPDQGPAGWPGSNFGNQCADSYYYTKNGTKTKLLDGCYQIKEDLPKCKALGKTILLSLGGGAVHDFYEVKSEESALNFADFLWGAFGPLTPDWTGPRPFGEASVDGFDFDIEKGSNFGYSIMVRRLRELFLQDPLNRYYISAAPQCIMPDKYLSHAISNSAFDFIFIQFYNNPSC 238
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHI2_COCIM (Endochitinase 2 OS=Coccidioides immitis GN=CTS2 PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 58/208 (27.88%), Postives = 90/208 (43.27%), Query Frame = 1 Query: 127 ISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTF---GNGQTPQINLAGHCDPTN------------NGCAGLSNEIKTCQ--GQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHF---LGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ---KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPC 681 ++VYWGQ + L+ C ++ I+ + F++ F G P N C + +GC + ++ C+ G+ I + A FLW F + RP G+A +DG DFDIE GSN + + R L Q + Y++AAPQC PD +L A+ FD++++QF NP C Sbjct: 31 LAVYWGQGAGQNRLSYFCEKTSFDIIVVGFINVFPDQGPAGWPGSNFGNQCADSYYYTKNGTKTKLLDGCYQIKEDLPKCKALGKTILLSLGGGAVHDFYEVKSEESALNFADFLWGAFGPLTPDWTGPRPFGEASVDGFDFDIEKGSNFGYSIMVRRLRELFLQDPLNRYYISAAPQCIMPDKYLSHAISNSAFDFIFIQFYNNPSC 238
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHLY_PARTH (Bifunctional chitinase/lysozyme (Fragment) OS=Parthenocissus quinquefolia PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 1 Query: 121 GVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLA 261 G I++YWGQNGNEG+L C++G Y VNIAFL+ FGNGQTP+INLA Sbjct: 1 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLA 47
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: YKT4_SCHPO (Chitinase-like protein PB1E7.04c OS=Schizosaccharomyces pombe GN=SPAPB1E7.04c PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 49/197 (24.87%), Postives = 81/197 (41.12%), Query Frame = 1 Query: 112 TSAGVISVYWGQN--GNEGS-----LADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNN-------GCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNF---SQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYV 651 T+ + YWG N G G L+ C + Y + ++ + F P + + C ++ C + +I+ CQ GIKV A +W+ F G+ S RP G AV+DG D ++ G+N + A+ + ++K Y++AAP C PD L A+ FD++ Sbjct: 23 TNQTAVLGYWGSNLAGKMGDRDQKRLSSYCQNTTYDAIILSSVIDFNVDGWPVYDFSNLCSDSDTFSGSELKKCPQIETDIQVCQENGIKVLLSIGGYNGNFSLNNDDDGTNFAFQVWNIFGSGEDSYRPFGKAVVDGFDLEVNKGTNTAYSAFAKRMLEIYASDPRRKYYISAAPTCMVPDHTLTKAISENSFDFL 219 The following BLAST results are available for this feature:
BLAST of FC931130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931130 ID=FC931130; Name=FC931130; organism=Citrus clementina; type=EST; length=690bpback to top |