FC931134

Overview
NameFC931134
Unique NameFC931134
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.871e-81
Identity = 149/210 (70.95%), Postives = 164/210 (78.10%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLN----TDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            MGKD +V         F+AKDY DPPPAPL+D  ELG WS YRAVIAEFIA            IGYK QTD + +       CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+RALLYMVAQCLGA+CG G VKAFQ +Y++RYGGGAN LA GY++G GLGAEI+GTFVLVYTVFSATDPKR  RDSHVPV
Sbjct:    1 MGKD-DVVQSGAGGGEFAAKDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPV 209          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.906e-80
Identity = 150/208 (72.12%), Postives = 162/208 (77.88%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            M KD+E A        + AKDY DPPPAPLID EEL KWS YRAVIAEF+A            IGYK Q+DP  N     C GVGILGIAWAFGGMIFILVYCTAG+SGGHINPAVTFGLFL RKVSL+RA+LY+VAQ LGAICG G VK FQ ++Y RYGGGANEL+DGY+KGTGL AEIIGTFVLVYTVFSATDPKR  RDSHVPV
Sbjct:    1 MAKDIEAAAAAEGGE-YMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPV 207          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.102e-80
Identity = 146/208 (70.19%), Postives = 163/208 (78.37%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            MGK+ +V            +DY DPPPAPL+D +ELG+WS YRAVIAEF+A            IGYK QTD + + D   CGGVG+LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RA+LY+VAQCLGA+CG   VK FQ S+Y+RYGGGANELA GY+KGTGL AEIIGTFVLVYTVFSATDPKR  RDSHVPV
Sbjct:    1 MGKEADVEAG-------GVRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPV 201          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.102e-80
Identity = 151/206 (73.30%), Postives = 156/206 (75.73%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            M KDVE          F  +DY DPPP P  D EEL KWS YRAVIAEF+A            IGYK Q+D       CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSLIRA+LYMVAQCLGAICG GFVKAFQ S+Y  YGGGAN LADGYN GTGL AEIIGTFVLVYTVFSATDPKR  RDSHVPV
Sbjct:    1 MAKDVE------GPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPV 200          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.641e-79
Identity = 148/208 (71.15%), Postives = 160/208 (76.92%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            M KD+E A           KDY DPPPAPL+D EEL KWS YRAVIAEF+A            IGYK QTD   +     CGGVG+LGIAWAFGGMIFILVYCTAG+SGGHINPAVTFGLFL RKVSL+RALLY+VAQCLGAICG G VK FQ ++Y RYGGGANEL+ GY+KGTGL AEIIGTFVLVYTVFSATDPKR  RDSHVPV
Sbjct:    1 MAKDIEAAAAH------EGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPV 202          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.257e-78
Identity = 147/208 (70.67%), Postives = 161/208 (77.40%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            MGK+V+V+          A+DY DPPPAPL+D +ELGKWS YRA+IAEF+A            IGYK QTD  +N     CGGVG+LGIAWAFGGMIFILVYCTAG+SGGHINPAVT GLFL RKVSL+RALLYM AQCLGAICG   VK FQ S Y+RYGGGANELA GY+ GTGL AEIIGTFVLVYTVFSATDPKR  RDSHVPV
Sbjct:    1 MGKEVDVSTLEAG----GARDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPV 204          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.422e-76
Identity = 145/208 (69.71%), Postives = 158/208 (75.96%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            MGK+V+V+           +DY DPPPAPLID +ELGKWS YRAVIAEF+A            IGYK QTD + +     C GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RALLYM AQ LGAICG   VK FQ  +Y RYGGGANE++ GY+ GTGL AEIIGTFVLVYTVFSATDPKR  RDSHVPV
Sbjct:    1 MGKEVDVSTLEAGGVR--DRDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPV 206          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.218e-75
Identity = 137/189 (72.49%), Postives = 147/189 (77.78%), Query Frame = 1
Query:  139 SAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            S KDY DPPP    +  EL KWSFYRAVIAEFIA            IG+KSQTD N     C  VG+LGI+WAFGGMIFILVYCTAGISGGHINPAVTFGLFL  KVSL+RA+ YMVAQCLGA CG G VK FQ +YYNRYGGGAN L+DGYN G G+GAEIIGTFVLVYTVFSATDPKR  RDSH+PV
Sbjct:   13 SGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPV 201          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 2.897e-75
Identity = 139/187 (74.33%), Postives = 150/187 (80.21%), Query Frame = 1
Query:  145 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            KDY DPPPAPL+D  EL  WSFYRA+IAEFIA            IG+K QT P      C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+RAL YM+AQCLGAICG GFVKAF K+ YN  GGGAN +ADGY+KGT LGAEIIGTFVLVYTVFSATDPKR  RDSH+PV
Sbjct:   15 KDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGP------CDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPV 195          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.320e-74
Identity = 138/187 (73.80%), Postives = 148/187 (79.14%), Query Frame = 1
Query:  145 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            KDY DPPPAPL+D  EL  WSFYRA+IAEFIA            IG+K+QT P      CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL RA+ YMVAQCLGAICG G VKAF  + Y R GGGAN +ADGY+ GT LGAEIIGTFVLVYTVFSATDPKR  RDSHVPV
Sbjct:   13 KDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGP------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPV 193          
The following BLAST results are available for this feature:
BLAST of FC931134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PIP22_MAIZE7.871e-8170.95Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP23_ORYSJ3.906e-8072.12Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP25_ORYSJ5.102e-8070.19Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP23_ARATH5.102e-8073.30Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP25_MAIZE5.641e-7971.15Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP24_ORYSJ1.257e-7870.67Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP26_MAIZE3.422e-7669.71Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP26_ARATH2.218e-7572.49Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP27_ARATH2.897e-7574.33Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP28_ARATH9.320e-7473.80Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC34101H01EF PostHarvP1 Citrus clementina cDNA clone C34101H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931134 ID=FC931134; Name=FC931134; organism=Citrus clementina; type=EST; length=706bp
CATCATTAAACTCTGTACCAACACAACAGTCGTAGCTCTTGTTTCTCCCT
CTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATG
TTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGAC
TACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAA
GTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGT
TTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGAT
CCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGC
TTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTA
TTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGG
CGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTT
GGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACT
ACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAG
GGCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACAC
TGTTTTCTCTGCCACTGATCCTAAAAGAGAGCGCAGAGACTCCCATGTTC
CGGTCT
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