FC931134

Overview
NameFC931134
Unique NameFC931134
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 3.361e-23
Identity = 68/167 (40.72%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRD 690
            E  K  F+RAV+AEF+A            +G+K     N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S+ RAL+Y++AQC+GAI     +     S       G N+LADG N G GLG EIIGT  LV  V + TD  R RRD
Sbjct:    4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGN-SLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTD--RRRRD 163          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.390e-23
Identity = 68/167 (40.72%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRD 690
            E  K  F+RAV+AEF+A            +G+K     N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S+ RAL+Y++AQC+GAI     +     S       G N+LADG N G GLG EIIGT  LV  V + TD  R RRD
Sbjct:    4 EFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGN-SLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTD--RRRRD 163          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22
Identity = 65/167 (38.92%), Postives = 89/167 (53.29%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRD 690
            E+ K  F+RAV+AEF+A            +G+    + N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N+LA G N G GLG EIIGT  LV  V + TD  R RRD
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDN-SLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTD--RRRRD 163          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22
Identity = 65/167 (38.92%), Postives = 88/167 (52.69%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRD 690
            E+ K  F+RAV+AEF+A            +G+    + N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S       G N+LA G N G GLG EIIGT  LV  V + TD  R RRD
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLEN-SLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTD--RRRRD 163          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22
Identity = 67/168 (39.88%), Postives = 88/168 (52.38%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRD 690
            E  K  F+RAV+AEF+A            +G+     P  N    G     + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G NELA G N G GLG EIIGT  LV  V + TD  R RRD
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFVFISIGSALGFNY---PVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDN-SLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTD--RRRRD 165          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21
Identity = 67/168 (39.88%), Postives = 89/168 (52.98%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRD 690
            E  K  F+RAV+AEF+A            +G+      N  T   G V   + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N LA G N G GLG EIIGT  LV  V + TD +R RRD
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTT---GAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD 166          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.409e-21
Identity = 67/168 (39.88%), Postives = 88/168 (52.38%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRD 690
            E  K  F+RAV+AEF+A            +G+      N  T   G V   + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N LA G N G GLG EIIGT  LV  V + TD  R RRD
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTT---GAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD--RRRRD 165          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21
Identity = 58/172 (33.72%), Postives = 87/172 (50.58%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            E  K +F+RAVIAEF+A            +G+    +   N        I+ ++ AFG  I  +      +SG H+NPAVT G  L  ++S+++A++Y++AQCLGA+     +        N    G N L+ G + G GLG EI+ TF LV  V + TD +R      VP+
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENN-SLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSVPL 174          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.561e-20
Identity = 65/168 (38.69%), Postives = 87/168 (51.79%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRD 690
            E  K  F+RAV+AEF+A            +G++    P  N    G     + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S       G N LA G + G GLG EIIGT  LV  V + TD  R RRD
Sbjct:    4 EFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQY---PVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGN-SLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTD--RRRRD 165          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18
Identity = 66/178 (37.08%), Postives = 92/178 (51.69%), Query Frame = 1
Query:  187 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTG----LGAEIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            EE+   +  RA +AEFI+            I +   TD    T    G+    +A AFG  +F+ V   A ISGGH+NPAVTFG+ LG  ++L+R +LY +AQ LG++  C F+ +F         GG    A G + G G    L  EI+ TF LVYTV+ +A DPK     +  P+
Sbjct:   13 EEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPS--GLVAAALAHAFG--LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAAC-FLLSFAT-------GGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPI 178          
The following BLAST results are available for this feature:
BLAST of FC931134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
AQP1_HUMAN3.361e-2340.72Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB4.390e-2340.72Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE2.845e-2238.92Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_RAT4.854e-2238.92Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_CANFA6.339e-2239.88Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_SHEEP1.844e-2139.88Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN2.409e-2139.88Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQPA_RANES5.366e-2133.72Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_PIG1.561e-2038.69Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
TIP12_ARATH4.252e-1837.08Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionC34101H01EF PostHarvP1 Citrus clementina cDNA clone C34101H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931134 ID=FC931134; Name=FC931134; organism=Citrus clementina; type=EST; length=706bp
CATCATTAAACTCTGTACCAACACAACAGTCGTAGCTCTTGTTTCTCCCT
CTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATG
TTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGAC
TACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAA
GTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGT
TTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGAT
CCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGC
TTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTA
TTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGG
CGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTT
GGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACT
ACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAG
GGCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACAC
TGTTTTCTCTGCCACTGATCCTAAAAGAGAGCGCAGAGACTCCCATGTTC
CGGTCT
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