FC931134

Overview
NameFC931134
Unique NameFC931134
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = 1
Query:  175 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            ++ F+ +   +F++AV AEF+A            I +    +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ +++ Y+ AQCLGAI G G +  +  +  N  GG G   +      G GL  E+I TF LV+T+F++ D KR
Sbjct:   26 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR 185          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17
Identity = 58/169 (34.32%), Postives = 90/169 (53.25%), Query Frame = 1
Query:  175 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            ++ F+ +   +F++AV AEF+A            I +    +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ +++ Y++AQCLGAI G G +  +  +  +  GG G   +      G GL  E+I TF LV+T+F++ D KR
Sbjct:   23 MVAFKGVWTQAFWKAVSAEFLATLIFVLLGVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR 182          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17
Identity = 58/169 (34.32%), Postives = 90/169 (53.25%), Query Frame = 1
Query:  175 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            ++ F+ +   +F++AV AEF+A            I +  + +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ +++ Y+ AQCLGAI G G +  +  +  +  GG G   +      G GL  E+I TF LV+T+F++ D KR
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR 182          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17
Identity = 58/169 (34.32%), Postives = 89/169 (52.66%), Query Frame = 1
Query:  175 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            ++ F+ +   +F++AV AEF+A            I +    +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ +++ Y+ AQCLGAI G G +  +  +  +  GG G   +      G GL  E+I TF LV+T+F++ D KR
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR 182          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17
Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKR 678
            +A +AEFI+            I Y   T+    T      G++  + A    +F+ V   A ISGGH+NPAVTFG F+G  ++L+R ++Y++AQ LG+I     +     S    +G     L++G   G  L  EI+ TF LVYTV+ +A DPK+
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATP----AGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK 167          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 57/159 (35.85%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG---GANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKR 678
            +A +AEFI+            + +   TD    T      G++  + A    +F+ V   A ISGGH+NPAVTFG F+G  +SL++A++Y VAQ LG++  C  +K          GG   GA  L+ G      +  EI+ TF LVYTV+ +A DPK+
Sbjct:   21 KAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPS----GLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKI-------ATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK 168          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 57/159 (35.85%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG---GANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKR 678
            +A +AEFI+            + +   TD    T      G++  + A    +F+ V   A ISGGH+NPAVTFG F+G  +SL++AL+Y VAQ LG++  C  +K          GG   GA  L+ G      +  E++ TF LVYTV+ +A DPK+
Sbjct:   21 KAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATP----AGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKI-------ATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK 168          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 58/169 (34.32%), Postives = 88/169 (52.07%), Query Frame = 1
Query:  175 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            ++ F+ +   +F++AV AEF+A            I +     P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ +++ Y+ AQCLGAI G G +  +  +  +  GG G   +      G GL  E+I TF LV+T+F++ D KR
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR 182          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 57/169 (33.73%), Postives = 89/169 (52.66%), Query Frame = 1
Query:  175 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            ++ F+ +   +F++AV AEF+A            I +     P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   R++S+ +++ Y+ AQCLGAI G G +  +  +  +  GG G   +    + G GL  E+I TF LV+T+F++ D KR
Sbjct:   23 MVAFKGVWTQTFWKAVTAEFLAMLIFVLLSLGSTINWGGAEKPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR 182          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 61/169 (36.09%), Postives = 87/169 (51.48%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTG-LGA---EIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            +A +AEFI+            + +   T+    T    G+    +A AFG  +F+ V   A ISGGH+NPAVTFG F+G  ++L+R +LY +AQ LG++  C  +K           GG    A G + G G L A   EI+ TF LVYTV+ +A DPK     +  P+
Sbjct:   21 KAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPS--GLVAAAVAHAFG--LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFAT--------GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPI 177          
The following BLAST results are available for this feature:
BLAST of FC931134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
AQP4_NOTAL5.553e-1834.91Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_MOUSE1.237e-1734.32Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_DIPME1.616e-1734.32Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_RAT2.110e-1734.32Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
TIP1_MEDTR3.599e-1735.26Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP12_ORYSJ6.140e-1735.85Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP12_MAIZE6.140e-1735.85Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
AQP4_HUMAN6.140e-1734.32Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_BOVIN8.019e-1733.73Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
TIP11_ARATH1.047e-1636.09Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]

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Properties
Property NameValue
Genbank descriptionC34101H01EF PostHarvP1 Citrus clementina cDNA clone C34101H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931134 ID=FC931134; Name=FC931134; organism=Citrus clementina; type=EST; length=706bp
CATCATTAAACTCTGTACCAACACAACAGTCGTAGCTCTTGTTTCTCCCT
CTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATG
TTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGAC
TACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAA
GTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGT
TTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGAT
CCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGC
TTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTA
TTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGG
CGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTT
GGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACT
ACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAG
GGCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACAC
TGTTTTCTCTGCCACTGATCCTAAAAGAGAGCGCAGAGACTCCCATGTTC
CGGTCT
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