FC931134

Overview
NameFC931134
Unique NameFC931134
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            +A +AEFIA            I Y   T D  L+       G++ +A A    +F+ V   A ISGGH+NPAVT GL +G  ++++    Y +AQ LG+   C  +K       N      + +A G N   G+  EII TF LVYTV+ +A DPK+    +  P+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT----NGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPI 175          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 56/159 (35.22%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKS---QTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKR 678
            RA +AEF++            +        T  +  T+  GG+ ++ +A A    +F  V     +SGGH+NPAVTF   +G ++S+IRA+ Y VAQ +GAI  C  ++       N        +A G ++  GL  EII TF LVY V+S A DPKR
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALA--LFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLAT----NGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKR 176          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            +A +AEFIA            I Y   T D  L+       G++ +A A    +F+ V   A ISGGH+NPAVT GL +G  ++++    Y +AQ LG+   C  +K       N      + +A G N   G+  EII TF LVYTV+ +A DPK+    +  P+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT----NGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPI 175          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 58/167 (34.73%), Postives = 81/167 (48.50%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANEL--ADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            +A +AEFI+            + +   T     T      G++  A A    +F+ V   A ISGGH+NPAVTFG F+G  ++L R LLY +AQ LG+   C F+  F        GG A       G +    L  EI+ TF LVYTV+ +A DPK+    +  P+
Sbjct:   21 KAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTP----AGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVAC-FLLRFST------GGLATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPI 176          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 55/165 (33.33%), Postives = 81/165 (49.09%), Query Frame = 1
Query:  187 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            +E+   +F +AV AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +G ++SL+RA  Y+ AQ +GAI G G +  +  +  N  G    N L +   +G  +  E+I TF L   +F++TD +R
Sbjct:    3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRR 154          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 52/123 (42.28%), Postives = 68/123 (55.28%), Query Frame = 1
Query:  313 TDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKR 678
            T+  GG+ ++ +A AF   +F  V     +SGGH+NPAVTFG  +G +V+ IRA+ Y +AQ LGAI  C  ++       N        LA G     GL  EII TF LVY V+S   DPKR
Sbjct:   60 TNTPGGLILVALAHAFA--LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTT----NGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKR 176          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 58/170 (34.12%), Postives = 82/170 (48.24%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-----DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            +A +AEFI+            I Y   T     DP          G++ +A   G  +F+ V   A ISGGH+NPAVTFGL LG +++++  + Y +AQ LGAI G   V+         +G        G     G+  EII TF LVYTV+ +A DPK+    +  P+
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDP---------AGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPI 174          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 54/156 (34.62%), Postives = 81/156 (51.92%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKR 678
            +A +AEFI+            I Y   T+    T      G++  + A    +F+ V   A ISGGH+NPAV FG F+G  ++L+R ++Y++AQ LG+I     +     S    +G     L++G   G  L  EI+ TF LVYTV+ +A DPK+
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATP----AGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK 166          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 59/167 (35.33%), Postives = 80/167 (47.90%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANEL--ADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            +A  AEFI+            + +   T     T      G++  A A    +F+ V   A ISGGH+NPAVTFG F+G  ++L R LLY VAQ LG+   C F+  F        GG A       G +    L  EI+ TF LVYTV+ +A DPK+    +  P+
Sbjct:   21 KAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTP----AGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVAC-FLLRFST------GGQATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPI 176          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 1
Query:  205 SFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            S  +A ++EFIA            + +   T            G++ IA A    +F+ V   A ISGGH+NPAVT GL +G  ++LI    Y +AQCLG+I  C  +  F     N      + ++ G     G+  EI+ TF LVYTV+ +A DPK+    +  P+
Sbjct:   16 SSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGA----LDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVAC-LLLVF---VTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPI 175          
The following BLAST results are available for this feature:
BLAST of FC931134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
TIP2_TOBAC4.400e-1534.34Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP32_ARATH5.747e-1535.22Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP1_TOBAC5.747e-1534.34Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP11_ORYSJ5.747e-1534.73Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
AQP5_HUMAN5.747e-1533.33Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP31_ARATH7.505e-1542.28Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP22_ORYSJ7.505e-1534.12Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP1_MEDSA7.505e-1534.62Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP11_MAIZE7.505e-1535.33Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP23_ARATH1.280e-1432.74Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]

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Properties
Property NameValue
Genbank descriptionC34101H01EF PostHarvP1 Citrus clementina cDNA clone C34101H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931134 ID=FC931134; Name=FC931134; organism=Citrus clementina; type=EST; length=706bp
CATCATTAAACTCTGTACCAACACAACAGTCGTAGCTCTTGTTTCTCCCT
CTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATG
TTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGAC
TACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAA
GTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGT
TTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGAT
CCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGC
TTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTA
TTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGG
CGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTT
GGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACT
ACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAG
GGCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACAC
TGTTTTCTCTGCCACTGATCCTAAAAGAGAGCGCAGAGACTCCCATGTTC
CGGTCT
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